RNA–Protein interactions for RNA: ENST00000462155.2

IFRD1-210, Transcript of interferon related developmental regulator 1, humanhuman

TSL 5

Gene IFRD1, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-210ENST00000462155 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
IFRD1-210ENST00000462155 AEBP2Q6ZN18 517 aaPredicted RBP15.95■□□□□ 0.14
IFRD1-210ENST00000462155 CHIC1Q5VXU3 224 aa15.65■□□□□ 0.1
IFRD1-210ENST00000462155 ABCC9O60706 1549 aa15.61■□□□□ 0.09
IFRD1-210ENST00000462155 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
IFRD1-210ENST00000462155 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
IFRD1-210ENST00000462155 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
IFRD1-210ENST00000462155 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
IFRD1-210ENST00000462155 NACADO15069 1562 aa14.43□□□□□ -0.1
IFRD1-210ENST00000462155 DCAF8L2P0C7V8 631 aa14.41□□□□□ -0.1
IFRD1-210ENST00000462155 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
IFRD1-210ENST00000462155 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
IFRD1-210ENST00000462155 CECR2Q9BXF3 1484 aa14.1□□□□□ -0.15
IFRD1-210ENST00000462155 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
IFRD1-210ENST00000462155 DNAJC5Q9H3Z4 198 aa14.06□□□□□ -0.16
IFRD1-210ENST00000462155 CC2D2AQ9P2K1 1620 aa14.02□□□□□ -0.16
IFRD1-210ENST00000462155 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
IFRD1-210ENST00000462155 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
IFRD1-210ENST00000462155 PHF23Q9BUL5 403 aaPredicted RBP13.87□□□□□ -0.19
IFRD1-210ENST00000462155 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
IFRD1-210ENST00000462155 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
IFRD1-210ENST00000462155 DCAF1Q9Y4B6 1507 aa13.76□□□□□ -0.21
IFRD1-210ENST00000462155 CUX2O14529 1486 aa13.6□□□□□ -0.23
IFRD1-210ENST00000462155 ERCC6Q03468 1493 aa13.54□□□□□ -0.24
IFRD1-210ENST00000462155 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
IFRD1-210ENST00000462155 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
IFRD1-210ENST00000462155 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
IFRD1-210ENST00000462155 NESP48681 1621 aa13.28□□□□□ -0.28
IFRD1-210ENST00000462155 ATAD2BQ9ULI0 1458 aa13.26□□□□□ -0.29
IFRD1-210ENST00000462155 HMGXB3Q12766 1538 aa13.19□□□□□ -0.3
IFRD1-210ENST00000462155 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
IFRD1-210ENST00000462155 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
IFRD1-210ENST00000462155 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
IFRD1-210ENST00000462155 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
IFRD1-210ENST00000462155 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
IFRD1-210ENST00000462155 LAMC3Q9Y6N6 1575 aa13.09□□□□□ -0.31
IFRD1-210ENST00000462155 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.33
IFRD1-210ENST00000462155 BAZ1AQ9NRL2 1556 aaPredicted RBP13.01□□□□□ -0.33
IFRD1-210ENST00000462155 MRC2Q9UBG0 1479 aa12.98□□□□□ -0.33
IFRD1-210ENST00000462155 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
IFRD1-210ENST00000462155 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
IFRD1-210ENST00000462155 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
IFRD1-210ENST00000462155 WDR62O43379 1518 aa12.93□□□□□ -0.34
IFRD1-210ENST00000462155 MROH2BQ7Z745 1585 aa12.88□□□□□ -0.35
IFRD1-210ENST00000462155 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
IFRD1-210ENST00000462155 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
IFRD1-210ENST00000462155 RIMBP3CA6NJZ7 1639 aa12.76□□□□□ -0.37
IFRD1-210ENST00000462155 RIMBP3BA6NNM3 1639 aa12.76□□□□□ -0.37
IFRD1-210ENST00000462155 RIMBP3Q9UFD9 1639 aa12.76□□□□□ -0.37
IFRD1-210ENST00000462155 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
IFRD1-210ENST00000462155 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
IFRD1-210ENST00000462155 ARHGEF11O15085 1522 aa12.71□□□□□ -0.38
IFRD1-210ENST00000462155 URB2Q14146 1524 aaKnown RBP12.7□□□□□ -0.38
IFRD1-210ENST00000462155 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
IFRD1-210ENST00000462155 CFTRP13569 1480 aa12.69□□□□□ -0.38
IFRD1-210ENST00000462155 WIZO95785 1651 aa12.67□□□□□ -0.38
IFRD1-210ENST00000462155 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
IFRD1-210ENST00000462155 IFT140Q96RY7 1462 aa12.61□□□□□ -0.39
IFRD1-210ENST00000462155 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
IFRD1-210ENST00000462155 FBLN2P98095 1184 aa12.54□□□□□ -0.4
IFRD1-210ENST00000462155 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.41
IFRD1-210ENST00000462155 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
IFRD1-210ENST00000462155 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
IFRD1-210ENST00000462155 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
IFRD1-210ENST00000462155 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.416e-7■■■■□ 22.8
IFRD1-210ENST00000462155 FOXD1Q16676 465 aa12.47□□□□□ -0.41
IFRD1-210ENST00000462155 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
IFRD1-210ENST00000462155 CHD1O14646 1710 aa12.43□□□□□ -0.42
IFRD1-210ENST00000462155 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
IFRD1-210ENST00000462155 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.43
IFRD1-210ENST00000462155 PRDM2Q13029 1718 aa12.4□□□□□ -0.43
IFRD1-210ENST00000462155 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
IFRD1-210ENST00000462155 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
IFRD1-210ENST00000462155 TDRD9Q8NDG6 1382 aaKnown RBP12.35□□□□□ -0.43
IFRD1-210ENST00000462155 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
IFRD1-210ENST00000462155 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
IFRD1-210ENST00000462155 CLASP1Q7Z460 1538 aa12.33□□□□□ -0.44
IFRD1-210ENST00000462155 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.44
IFRD1-210ENST00000462155 SYNJ1O43426 1573 aa12.31□□□□□ -0.44
IFRD1-210ENST00000462155 SOGA1O94964 1423 aa12.31□□□□□ -0.44
IFRD1-210ENST00000462155 GAPVD1Q14C86 1478 aa12.27□□□□□ -0.44
IFRD1-210ENST00000462155 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.45
IFRD1-210ENST00000462155 SYNJ2O15056 1496 aa12.24□□□□□ -0.45
IFRD1-210ENST00000462155 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
IFRD1-210ENST00000462155 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
IFRD1-210ENST00000462155 FGD5Q6ZNL6 1462 aa12.22□□□□□ -0.45
IFRD1-210ENST00000462155 PPP6R1Q9UPN7 881 aa12.2□□□□□ -0.46
IFRD1-210ENST00000462155 ADRA2BP18089 450 aa12.19□□□□□ -0.46
IFRD1-210ENST00000462155 CUX1P39880 1505 aa12.12□□□□□ -0.47
IFRD1-210ENST00000462155 ERCC6L2Q5T890 1561 aa12.11□□□□□ -0.47
IFRD1-210ENST00000462155 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
IFRD1-210ENST00000462155 GRIN2AQ12879 1464 aa12.08□□□□□ -0.48
IFRD1-210ENST00000462155 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
IFRD1-210ENST00000462155 CEP170Q5SW79 1584 aa12.06□□□□□ -0.48
IFRD1-210ENST00000462155 FAM69CQ0P6D2 419 aa12.05□□□□□ -0.48
IFRD1-210ENST00000462155 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
IFRD1-210ENST00000462155 NUP160Q12769 1436 aa12.03□□□□□ -0.48
IFRD1-210ENST00000462155 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
IFRD1-210ENST00000462155 ABCA5Q8WWZ7 1642 aa12.02□□□□□ -0.49
IFRD1-210ENST00000462155 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms