RNA–Protein interactions for RNA: ENST00000462048.2

AMT-208, Transcript of aminomethyltransferase, humanhuman

TSL 4

Gene AMT, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-208ENST00000462048 NISCHQ9Y2I1 1504 aa32.23■■■□□ 2.75
AMT-208ENST00000462048 ABCC9O60706 1549 aa29.34■■■□□ 2.29
AMT-208ENST00000462048 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
AMT-208ENST00000462048 RB1CC1Q8TDY2 1594 aa27.87■■■□□ 2.05
AMT-208ENST00000462048 DNAJC5BQ9UF47 199 aa27.72■■■□□ 2.03
AMT-208ENST00000462048 NACADO15069 1562 aa27.6■■■□□ 2.01
AMT-208ENST00000462048 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
AMT-208ENST00000462048 DCAF8L2P0C7V8 631 aa27.19■■□□□ 1.94
AMT-208ENST00000462048 PABPN1Q86U42 306 aaKnown RBP eCLIP27.19■■□□□ 1.94
AMT-208ENST00000462048 MYO15BQ96JP2 1530 aa27.15■■□□□ 1.94
AMT-208ENST00000462048 BICRAQ9NZM4 1560 aa27.04■■□□□ 1.92
AMT-208ENST00000462048 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
AMT-208ENST00000462048 ZCCHC6Q5VYS8 1495 aaKnown RBP26.67■■□□□ 1.86
AMT-208ENST00000462048 DCAF1Q9Y4B6 1507 aa26.66■■□□□ 1.86
AMT-208ENST00000462048 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
AMT-208ENST00000462048 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
AMT-208ENST00000462048 SCRIBQ14160 1630 aa26.45■■□□□ 1.82
AMT-208ENST00000462048 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
AMT-208ENST00000462048 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
AMT-208ENST00000462048 CUX2O14529 1486 aa25.5■■□□□ 1.67
AMT-208ENST00000462048 NCAPD3P42695 1498 aa25.44■■□□□ 1.66
AMT-208ENST00000462048 ERCC6Q03468 1493 aa25.39■■□□□ 1.65
AMT-208ENST00000462048 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
AMT-208ENST00000462048 HMGXB3Q12766 1538 aa25.28■■□□□ 1.64
AMT-208ENST00000462048 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
AMT-208ENST00000462048 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
AMT-208ENST00000462048 NESP48681 1621 aa25.1■■□□□ 1.61
AMT-208ENST00000462048 BAZ1AQ9NRL2 1556 aaPredicted RBP25.07■■□□□ 1.6
AMT-208ENST00000462048 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
AMT-208ENST00000462048 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
AMT-208ENST00000462048 THOC2Q8NI27 1593 aaKnown RBP25■■□□□ 1.59
AMT-208ENST00000462048 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
AMT-208ENST00000462048 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
AMT-208ENST00000462048 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
AMT-208ENST00000462048 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
AMT-208ENST00000462048 CADPSQ9ULU8 1353 aa24.63■■□□□ 1.53
AMT-208ENST00000462048 MRC2Q9UBG0 1479 aa24.61■■□□□ 1.53
AMT-208ENST00000462048 WDR62O43379 1518 aa24.59■■□□□ 1.53
AMT-208ENST00000462048 WIZO95785 1651 aa24.5■■□□□ 1.51
AMT-208ENST00000462048 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
AMT-208ENST00000462048 CEP164Q9UPV0 1460 aa24.45■■□□□ 1.5
AMT-208ENST00000462048 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
AMT-208ENST00000462048 CFTRP13569 1480 aa24.31■■□□□ 1.48
AMT-208ENST00000462048 TOP2AP11388 1531 aaKnown RBP24.21■■□□□ 1.47
AMT-208ENST00000462048 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
AMT-208ENST00000462048 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
AMT-208ENST00000462048 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
AMT-208ENST00000462048 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
AMT-208ENST00000462048 RIMBP3CA6NJZ7 1639 aa23.98■■□□□ 1.43
AMT-208ENST00000462048 RIMBP3BA6NNM3 1639 aa23.98■■□□□ 1.43
AMT-208ENST00000462048 RIMBP3Q9UFD9 1639 aa23.98■■□□□ 1.43
AMT-208ENST00000462048 IFT140Q96RY7 1462 aa23.97■■□□□ 1.43
AMT-208ENST00000462048 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
AMT-208ENST00000462048 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
AMT-208ENST00000462048 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
AMT-208ENST00000462048 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
AMT-208ENST00000462048 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
AMT-208ENST00000462048 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
AMT-208ENST00000462048 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
AMT-208ENST00000462048 CHD1O14646 1710 aa23.73■■□□□ 1.39
AMT-208ENST00000462048 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
AMT-208ENST00000462048 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.382e-8■■■■□ 23.7
AMT-208ENST00000462048 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
AMT-208ENST00000462048 CYB5RLQ6IPT4 315 aa23.61■■□□□ 1.37
AMT-208ENST00000462048 ARAP1Q96P48 1450 aa23.59■■□□□ 1.37
AMT-208ENST00000462048 WDR97A6NE52 1622 aa23.52■■□□□ 1.36
AMT-208ENST00000462048 FBLN2P98095 1184 aa23.51■■□□□ 1.35
AMT-208ENST00000462048 RAD54L2Q9Y4B4 1467 aa23.48■■□□□ 1.35
AMT-208ENST00000462048 SOGA1O94964 1423 aa23.46■■□□□ 1.35
AMT-208ENST00000462048 TRHP20396 242 aaPredicted RBP23.46■■□□□ 1.35
AMT-208ENST00000462048 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
AMT-208ENST00000462048 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
AMT-208ENST00000462048 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
AMT-208ENST00000462048 SYNJ1O43426 1573 aa23.41■■□□□ 1.34
AMT-208ENST00000462048 FGD5Q6ZNL6 1462 aa23.41■■□□□ 1.34
AMT-208ENST00000462048 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
AMT-208ENST00000462048 GRIN2BQ13224 1484 aa23.34■■□□□ 1.33
AMT-208ENST00000462048 CUX1P39880 1505 aa23.33■■□□□ 1.32
AMT-208ENST00000462048 CHMP7Q8WUX9 453 aaPredicted RBP23.32■■□□□ 1.32
AMT-208ENST00000462048 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
AMT-208ENST00000462048 PBRM1Q86U86 1689 aa23.27■■□□□ 1.32
AMT-208ENST00000462048 GAPVD1Q14C86 1478 aa23.19■■□□□ 1.3
AMT-208ENST00000462048 ABCA5Q8WWZ7 1642 aa23.17■■□□□ 1.3
AMT-208ENST00000462048 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
AMT-208ENST00000462048 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
AMT-208ENST00000462048 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
AMT-208ENST00000462048 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
AMT-208ENST00000462048 ERCC6L2Q5T890 1561 aa22.99■■□□□ 1.27
AMT-208ENST00000462048 NUP160Q12769 1436 aa22.98■■□□□ 1.27
AMT-208ENST00000462048 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
AMT-208ENST00000462048 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
AMT-208ENST00000462048 SHROOM2Q13796 1616 aa22.96■■□□□ 1.27
AMT-208ENST00000462048 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
AMT-208ENST00000462048 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
AMT-208ENST00000462048 FHAD1B1AJZ9 1412 aa22.9■■□□□ 1.26
AMT-208ENST00000462048 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
AMT-208ENST00000462048 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
AMT-208ENST00000462048 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
AMT-208ENST00000462048 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
AMT-208ENST00000462048 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms