RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
GTF3C5-208ENST00000461871 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
GTF3C5-208ENST00000461871 ZCCHC6Q5VYS8 1495 aaKnown RBP27.01■■□□□ 1.91
GTF3C5-208ENST00000461871 DCAF1Q9Y4B6 1507 aa26.81■■□□□ 1.88
GTF3C5-208ENST00000461871 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
GTF3C5-208ENST00000461871 ABCC9O60706 1549 aa26.55■■□□□ 1.84
GTF3C5-208ENST00000461871 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
GTF3C5-208ENST00000461871 NACADO15069 1562 aa26.35■■□□□ 1.81
GTF3C5-208ENST00000461871 RB1CC1Q8TDY2 1594 aa26.1■■□□□ 1.77
GTF3C5-208ENST00000461871 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
GTF3C5-208ENST00000461871 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
GTF3C5-208ENST00000461871 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
GTF3C5-208ENST00000461871 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
GTF3C5-208ENST00000461871 BICRAQ9NZM4 1560 aa25.19■■□□□ 1.62
GTF3C5-208ENST00000461871 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
GTF3C5-208ENST00000461871 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
GTF3C5-208ENST00000461871 BAZ1AQ9NRL2 1556 aaPredicted RBP24.92■■□□□ 1.58
GTF3C5-208ENST00000461871 RSF1Q96T23 1441 aaPredicted RBP24.9■■□□□ 1.58
GTF3C5-208ENST00000461871 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.57
GTF3C5-208ENST00000461871 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
GTF3C5-208ENST00000461871 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
GTF3C5-208ENST00000461871 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.52
GTF3C5-208ENST00000461871 DNAJC5Q9H3Z4 198 aa24.55■■□□□ 1.52
GTF3C5-208ENST00000461871 WIZO95785 1651 aa24.5■■□□□ 1.51
GTF3C5-208ENST00000461871 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
GTF3C5-208ENST00000461871 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
GTF3C5-208ENST00000461871 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
GTF3C5-208ENST00000461871 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
GTF3C5-208ENST00000461871 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
GTF3C5-208ENST00000461871 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
GTF3C5-208ENST00000461871 BAZ1BQ9UIG0 1483 aaKnown RBP24.24■■□□□ 1.47
GTF3C5-208ENST00000461871 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
GTF3C5-208ENST00000461871 CCDC88BA6NC98 1476 aa24.1■■□□□ 1.45
GTF3C5-208ENST00000461871 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
GTF3C5-208ENST00000461871 CFTRP13569 1480 aa23.69■■□□□ 1.38
GTF3C5-208ENST00000461871 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
GTF3C5-208ENST00000461871 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
GTF3C5-208ENST00000461871 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
GTF3C5-208ENST00000461871 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
GTF3C5-208ENST00000461871 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
GTF3C5-208ENST00000461871 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
GTF3C5-208ENST00000461871 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
GTF3C5-208ENST00000461871 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
GTF3C5-208ENST00000461871 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
GTF3C5-208ENST00000461871 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
GTF3C5-208ENST00000461871 NESP48681 1621 aa23.24■■□□□ 1.31
GTF3C5-208ENST00000461871 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
GTF3C5-208ENST00000461871 EEA1Q15075 1411 aa23.23■■□□□ 1.31
GTF3C5-208ENST00000461871 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
GTF3C5-208ENST00000461871 CUX1P39880 1505 aa23.18■■□□□ 1.3
GTF3C5-208ENST00000461871 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
GTF3C5-208ENST00000461871 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
GTF3C5-208ENST00000461871 SOGA1O94964 1423 aa22.99■■□□□ 1.27
GTF3C5-208ENST00000461871 CUX2O14529 1486 aa22.99■■□□□ 1.27
GTF3C5-208ENST00000461871 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
GTF3C5-208ENST00000461871 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
GTF3C5-208ENST00000461871 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
GTF3C5-208ENST00000461871 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
GTF3C5-208ENST00000461871 FGD5Q6ZNL6 1462 aa22.95■■□□□ 1.26
GTF3C5-208ENST00000461871 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
GTF3C5-208ENST00000461871 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
GTF3C5-208ENST00000461871 POLA1P09884 1462 aaPredicted RBP22.89■■□□□ 1.25
GTF3C5-208ENST00000461871 ERCC6Q03468 1493 aa22.86■■□□□ 1.25
GTF3C5-208ENST00000461871 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
GTF3C5-208ENST00000461871 ABCA10Q8WWZ4 1543 aa22.86■■□□□ 1.25
GTF3C5-208ENST00000461871 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
GTF3C5-208ENST00000461871 WDR62O43379 1518 aa22.83■■□□□ 1.25
GTF3C5-208ENST00000461871 KIF21BO75037 1637 aa22.77■■□□□ 1.24
GTF3C5-208ENST00000461871 GOLGA3Q08378 1498 aa22.73■■□□□ 1.23
GTF3C5-208ENST00000461871 IGF1RP08069 1367 aa22.73■■□□□ 1.23
GTF3C5-208ENST00000461871 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
GTF3C5-208ENST00000461871 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
GTF3C5-208ENST00000461871 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
GTF3C5-208ENST00000461871 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
GTF3C5-208ENST00000461871 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
GTF3C5-208ENST00000461871 ERICH3Q5RHP9 1530 aa22.7■■□□□ 1.22
GTF3C5-208ENST00000461871 WDR97A6NE52 1622 aa22.7■■□□□ 1.22
GTF3C5-208ENST00000461871 TARBP1Q13395 1621 aaKnown RBP22.69■■□□□ 1.22
GTF3C5-208ENST00000461871 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
GTF3C5-208ENST00000461871 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
GTF3C5-208ENST00000461871 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
GTF3C5-208ENST00000461871 UBTFP17480 764 aaKnown RBP22.59■■□□□ 1.21
GTF3C5-208ENST00000461871 CUL7Q14999 1698 aa22.56■■□□□ 1.2
GTF3C5-208ENST00000461871 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
GTF3C5-208ENST00000461871 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
GTF3C5-208ENST00000461871 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
GTF3C5-208ENST00000461871 AQRO60306 1485 aaKnown RBP eCLIP22.43■■□□□ 1.181e-10■■■■■ 37.3
GTF3C5-208ENST00000461871 CEP162Q5TB80 1403 aa22.43■■□□□ 1.18
GTF3C5-208ENST00000461871 FHAD1B1AJZ9 1412 aa22.42■■□□□ 1.18
GTF3C5-208ENST00000461871 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
GTF3C5-208ENST00000461871 ZNF608Q9ULD9 1512 aaPredicted RBP22.39■■□□□ 1.17
GTF3C5-208ENST00000461871 PBRM1Q86U86 1689 aa22.38■■□□□ 1.17
GTF3C5-208ENST00000461871 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
GTF3C5-208ENST00000461871 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
GTF3C5-208ENST00000461871 CLIP1P30622 1438 aa22.33■■□□□ 1.17
GTF3C5-208ENST00000461871 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
GTF3C5-208ENST00000461871 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
GTF3C5-208ENST00000461871 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
GTF3C5-208ENST00000461871 CTTNBP2Q8WZ74 1663 aa22.2■■□□□ 1.14
GTF3C5-208ENST00000461871 CHMP7Q8WUX9 453 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms