RNA–Protein interactions for RNA: ENST00000461554.5

PCBP4-205, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-205ENST00000461554 NISCHQ9Y2I1 1504 aa36.71■■■■□ 3.47
PCBP4-205ENST00000461554 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
PCBP4-205ENST00000461554 ZCCHC6Q5VYS8 1495 aaKnown RBP30.81■■■□□ 2.52
PCBP4-205ENST00000461554 ABCC9O60706 1549 aa30.51■■■□□ 2.47
PCBP4-205ENST00000461554 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
PCBP4-205ENST00000461554 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
PCBP4-205ENST00000461554 MYO15BQ96JP2 1530 aa30.14■■■□□ 2.42
PCBP4-205ENST00000461554 NACADO15069 1562 aa30.01■■■□□ 2.39
PCBP4-205ENST00000461554 RB1CC1Q8TDY2 1594 aa29.8■■■□□ 2.36
PCBP4-205ENST00000461554 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
PCBP4-205ENST00000461554 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
PCBP4-205ENST00000461554 UNC13AQ9UPW8 1703 aa29.25■■■□□ 2.27
PCBP4-205ENST00000461554 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
PCBP4-205ENST00000461554 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
PCBP4-205ENST00000461554 CECR2Q9BXF3 1484 aa28.48■■■□□ 2.15
PCBP4-205ENST00000461554 SUPT5HO00267 1087 aaKnown RBP28.42■■■□□ 2.14
PCBP4-205ENST00000461554 BAZ1AQ9NRL2 1556 aaPredicted RBP28.39■■■□□ 2.14
PCBP4-205ENST00000461554 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
PCBP4-205ENST00000461554 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
PCBP4-205ENST00000461554 SMARCA4P51532 1647 aa28.3■■■□□ 2.12
PCBP4-205ENST00000461554 WIZO95785 1651 aa28.12■■■□□ 2.09
PCBP4-205ENST00000461554 EIF4G1Q04637 1599 aaKnown RBP28.04■■■□□ 2.08
PCBP4-205ENST00000461554 PEG3Q9GZU2 1588 aa27.99■■■□□ 2.07
PCBP4-205ENST00000461554 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
PCBP4-205ENST00000461554 ATAD2BQ9ULI0 1458 aa27.84■■■□□ 2.05
PCBP4-205ENST00000461554 TOP2AP11388 1531 aaKnown RBP27.84■■■□□ 2.05
PCBP4-205ENST00000461554 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
PCBP4-205ENST00000461554 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
PCBP4-205ENST00000461554 HMGXB3Q12766 1538 aa27.65■■■□□ 2.02
PCBP4-205ENST00000461554 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
PCBP4-205ENST00000461554 CCDC88BA6NC98 1476 aa27.49■■□□□ 1.99
PCBP4-205ENST00000461554 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
PCBP4-205ENST00000461554 DNAJC5BQ9UF47 199 aa27.02■■□□□ 1.92
PCBP4-205ENST00000461554 CFTRP13569 1480 aa26.98■■□□□ 1.91
PCBP4-205ENST00000461554 PRDM2Q13029 1718 aa26.98■■□□□ 1.91
PCBP4-205ENST00000461554 CADPSQ9ULU8 1353 aa26.9■■□□□ 1.9
PCBP4-205ENST00000461554 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
PCBP4-205ENST00000461554 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
PCBP4-205ENST00000461554 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
PCBP4-205ENST00000461554 NESP48681 1621 aa26.72■■□□□ 1.87
PCBP4-205ENST00000461554 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
PCBP4-205ENST00000461554 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
PCBP4-205ENST00000461554 FANCD2Q9BXW9 1451 aa26.62■■□□□ 1.85
PCBP4-205ENST00000461554 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
PCBP4-205ENST00000461554 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
PCBP4-205ENST00000461554 PDS5BQ9NTI5 1447 aa26.55■■□□□ 1.84
PCBP4-205ENST00000461554 CUX1P39880 1505 aa26.51■■□□□ 1.83
PCBP4-205ENST00000461554 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
PCBP4-205ENST00000461554 CEP164Q9UPV0 1460 aa26.5■■□□□ 1.83
PCBP4-205ENST00000461554 DNMBPQ6XZF7 1577 aa26.38■■□□□ 1.81
PCBP4-205ENST00000461554 TOPBP1Q92547 1522 aa26.32■■□□□ 1.8
PCBP4-205ENST00000461554 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
PCBP4-205ENST00000461554 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
PCBP4-205ENST00000461554 SOGA1O94964 1423 aa26.26■■□□□ 1.79
PCBP4-205ENST00000461554 EEA1Q15075 1411 aa26.25■■□□□ 1.79
PCBP4-205ENST00000461554 MRC2Q9UBG0 1479 aa26.23■■□□□ 1.79
PCBP4-205ENST00000461554 FAM9AQ8IZU1 332 aaPredicted RBP26.22■■□□□ 1.79
PCBP4-205ENST00000461554 ERCC6Q03468 1493 aa26.21■■□□□ 1.79
PCBP4-205ENST00000461554 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
PCBP4-205ENST00000461554 RUSC2Q8N2Y8 1516 aa26.17■■□□□ 1.78
PCBP4-205ENST00000461554 WDR62O43379 1518 aa26.13■■□□□ 1.77
PCBP4-205ENST00000461554 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
PCBP4-205ENST00000461554 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
PCBP4-205ENST00000461554 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
PCBP4-205ENST00000461554 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
PCBP4-205ENST00000461554 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
PCBP4-205ENST00000461554 CSRNP3Q8WYN3 585 aa26.03■■□□□ 1.76
PCBP4-205ENST00000461554 CUX2O14529 1486 aa26.03■■□□□ 1.76
PCBP4-205ENST00000461554 LOC105371045A0A1W2PR82 267 aa26.01■■□□□ 1.75
PCBP4-205ENST00000461554 TARBP1Q13395 1621 aaKnown RBP25.98■■□□□ 1.75
PCBP4-205ENST00000461554 KIF21BO75037 1637 aa25.95■■□□□ 1.74
PCBP4-205ENST00000461554 ABCA5Q8WWZ7 1642 aa25.89■■□□□ 1.73
PCBP4-205ENST00000461554 IFT140Q96RY7 1462 aa25.87■■□□□ 1.73
PCBP4-205ENST00000461554 GOLGA3Q08378 1498 aa25.85■■□□□ 1.73
PCBP4-205ENST00000461554 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
PCBP4-205ENST00000461554 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
PCBP4-205ENST00000461554 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
PCBP4-205ENST00000461554 IGF1RP08069 1367 aa25.8■■□□□ 1.72
PCBP4-205ENST00000461554 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
PCBP4-205ENST00000461554 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
PCBP4-205ENST00000461554 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
PCBP4-205ENST00000461554 CUL7Q14999 1698 aa25.76■■□□□ 1.71
PCBP4-205ENST00000461554 PBRM1Q86U86 1689 aa25.75■■□□□ 1.71
PCBP4-205ENST00000461554 TNIKQ9UKE5 1360 aa25.7■■□□□ 1.7
PCBP4-205ENST00000461554 ZNF608Q9ULD9 1512 aaPredicted RBP25.69■■□□□ 1.7
PCBP4-205ENST00000461554 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
PCBP4-205ENST00000461554 EIF4G3O43432 1585 aaKnown RBP25.68■■□□□ 1.7
PCBP4-205ENST00000461554 AQRO60306 1485 aaKnown RBP eCLIP25.67■■□□□ 1.71e-8■■■□□ 18.9
PCBP4-205ENST00000461554 UBTFP17480 764 aaKnown RBP25.66■■□□□ 1.7
PCBP4-205ENST00000461554 GRIN2BQ13224 1484 aa25.63■■□□□ 1.69
PCBP4-205ENST00000461554 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
PCBP4-205ENST00000461554 CEP162Q5TB80 1403 aa25.55■■□□□ 1.68
PCBP4-205ENST00000461554 FHAD1B1AJZ9 1412 aa25.51■■□□□ 1.67
PCBP4-205ENST00000461554 SNAPC4Q5SXM2 1469 aa25.47■■□□□ 1.67
PCBP4-205ENST00000461554 CTTNBP2Q8WZ74 1663 aa25.46■■□□□ 1.67
PCBP4-205ENST00000461554 MAGI1Q96QZ7 1491 aaPredicted RBP25.46■■□□□ 1.67
PCBP4-205ENST00000461554 CLIP1P30622 1438 aa25.4■■□□□ 1.66
PCBP4-205ENST00000461554 SYNJ2O15056 1496 aa25.35■■□□□ 1.65
PCBP4-205ENST00000461554 GRIN2AQ12879 1464 aa25.32■■□□□ 1.64
PCBP4-205ENST00000461554 RANGAP1P46060 587 aaPredicted RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms