RNA–Protein interactions for RNA: ENST00000460968.1

RTKN-204, Transcript of rhotekin, humanhuman

TSL 2

Gene RTKN, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-204ENST00000460968 NISCHQ9Y2I1 1504 aa32.9■■■□□ 2.86
RTKN-204ENST00000460968 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
RTKN-204ENST00000460968 ABCC9O60706 1549 aa27.86■■■□□ 2.05
RTKN-204ENST00000460968 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■■□□ 2
RTKN-204ENST00000460968 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
RTKN-204ENST00000460968 MYO15BQ96JP2 1530 aa27.25■■□□□ 1.95
RTKN-204ENST00000460968 NACADO15069 1562 aa27.21■■□□□ 1.95
RTKN-204ENST00000460968 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
RTKN-204ENST00000460968 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
RTKN-204ENST00000460968 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
RTKN-204ENST00000460968 SCRIBQ14160 1630 aa26.49■■□□□ 1.83
RTKN-204ENST00000460968 BICRAQ9NZM4 1560 aa26.25■■□□□ 1.79
RTKN-204ENST00000460968 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
RTKN-204ENST00000460968 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
RTKN-204ENST00000460968 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
RTKN-204ENST00000460968 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
RTKN-204ENST00000460968 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
RTKN-204ENST00000460968 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
RTKN-204ENST00000460968 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
RTKN-204ENST00000460968 CC2D2AQ9P2K1 1620 aa25.28■■□□□ 1.64
RTKN-204ENST00000460968 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
RTKN-204ENST00000460968 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
RTKN-204ENST00000460968 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
RTKN-204ENST00000460968 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
RTKN-204ENST00000460968 WIZO95785 1651 aa25.1■■□□□ 1.61
RTKN-204ENST00000460968 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
RTKN-204ENST00000460968 NCAPD3P42695 1498 aa25.08■■□□□ 1.6
RTKN-204ENST00000460968 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
RTKN-204ENST00000460968 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
RTKN-204ENST00000460968 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
RTKN-204ENST00000460968 SUPT5HO00267 1087 aaKnown RBP24.88■■□□□ 1.57
RTKN-204ENST00000460968 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
RTKN-204ENST00000460968 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
RTKN-204ENST00000460968 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
RTKN-204ENST00000460968 CFTRP13569 1480 aa24.33■■□□□ 1.49
RTKN-204ENST00000460968 PRDM2Q13029 1718 aa24.28■■□□□ 1.48
RTKN-204ENST00000460968 NESP48681 1621 aa24.26■■□□□ 1.47
RTKN-204ENST00000460968 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
RTKN-204ENST00000460968 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
RTKN-204ENST00000460968 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
RTKN-204ENST00000460968 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
RTKN-204ENST00000460968 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
RTKN-204ENST00000460968 MRC2Q9UBG0 1479 aa23.86■■□□□ 1.41
RTKN-204ENST00000460968 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
RTKN-204ENST00000460968 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
RTKN-204ENST00000460968 WDR62O43379 1518 aa23.79■■□□□ 1.4
RTKN-204ENST00000460968 URB2Q14146 1524 aaKnown RBP23.79■■□□□ 1.4
RTKN-204ENST00000460968 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
RTKN-204ENST00000460968 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
RTKN-204ENST00000460968 CUX1P39880 1505 aa23.74■■□□□ 1.39
RTKN-204ENST00000460968 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
RTKN-204ENST00000460968 BIVM-ERCC5R4GMW8 1640 aa23.72■■□□□ 1.39
RTKN-204ENST00000460968 TOP2BQ02880 1626 aa23.71■■□□□ 1.39
RTKN-204ENST00000460968 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
RTKN-204ENST00000460968 CUX2O14529 1486 aa23.62■■□□□ 1.37
RTKN-204ENST00000460968 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
RTKN-204ENST00000460968 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
RTKN-204ENST00000460968 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
RTKN-204ENST00000460968 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
RTKN-204ENST00000460968 SOGA1O94964 1423 aa23.48■■□□□ 1.35
RTKN-204ENST00000460968 IFT140Q96RY7 1462 aa23.48■■□□□ 1.35
RTKN-204ENST00000460968 TARBP1Q13395 1621 aaKnown RBP23.48■■□□□ 1.35
RTKN-204ENST00000460968 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
RTKN-204ENST00000460968 WDR97A6NE52 1622 aa23.43■■□□□ 1.34
RTKN-204ENST00000460968 ABCA10Q8WWZ4 1543 aa23.41■■□□□ 1.34
RTKN-204ENST00000460968 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
RTKN-204ENST00000460968 ABCA5Q8WWZ7 1642 aa23.27■■□□□ 1.32
RTKN-204ENST00000460968 EIF4G3O43432 1585 aaKnown RBP23.26■■□□□ 1.31
RTKN-204ENST00000460968 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
RTKN-204ENST00000460968 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
RTKN-204ENST00000460968 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
RTKN-204ENST00000460968 AQRO60306 1485 aaKnown RBP eCLIP23.22■■□□□ 1.311e-7■□□□□ 9
RTKN-204ENST00000460968 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
RTKN-204ENST00000460968 EEA1Q15075 1411 aa23.18■■□□□ 1.3
RTKN-204ENST00000460968 ERICH3Q5RHP9 1530 aa23.16■■□□□ 1.3
RTKN-204ENST00000460968 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
RTKN-204ENST00000460968 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
RTKN-204ENST00000460968 IGF1RP08069 1367 aa23.08■■□□□ 1.29
RTKN-204ENST00000460968 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
RTKN-204ENST00000460968 CUL7Q14999 1698 aa23.06■■□□□ 1.28
RTKN-204ENST00000460968 SNAPC4Q5SXM2 1469 aa23.03■■□□□ 1.28
RTKN-204ENST00000460968 CSRNP3Q8WYN3 585 aa23.01■■□□□ 1.27
RTKN-204ENST00000460968 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
RTKN-204ENST00000460968 FHAD1B1AJZ9 1412 aa22.98■■□□□ 1.27
RTKN-204ENST00000460968 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
RTKN-204ENST00000460968 CARMIL1Q5VZK9 1371 aa22.96■■□□□ 1.27
RTKN-204ENST00000460968 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
RTKN-204ENST00000460968 PRXQ9BXM0 1461 aa22.93■■□□□ 1.26
RTKN-204ENST00000460968 CHD1O14646 1710 aa22.9■■□□□ 1.26
RTKN-204ENST00000460968 KIF21BO75037 1637 aa22.9■■□□□ 1.26
RTKN-204ENST00000460968 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.25
RTKN-204ENST00000460968 CHMP7Q8WUX9 453 aaPredicted RBP22.87■■□□□ 1.25
RTKN-204ENST00000460968 GRIN2AQ12879 1464 aa22.86■■□□□ 1.25
RTKN-204ENST00000460968 FBLN2P98095 1184 aa22.8■■□□□ 1.24
RTKN-204ENST00000460968 GOLGA3Q08378 1498 aa22.76■■□□□ 1.23
RTKN-204ENST00000460968 NUP160Q12769 1436 aa22.75■■□□□ 1.23
RTKN-204ENST00000460968 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
RTKN-204ENST00000460968 CTTNBP2Q8WZ74 1663 aa22.7■■□□□ 1.22
RTKN-204ENST00000460968 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
RTKN-204ENST00000460968 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 1205.3 ms