RNA–Protein interactions for RNA: ENST00000460609.3

RN7SL254P-201, Transcript of RNA, 7SL, cytoplasmic 254, pseudogene, humanhuman

BASIC

Gene RN7SL254P, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL254P-201ENST00000460609 NISCHQ9Y2I1 1504 aa15.58■□□□□ 0.09
RN7SL254P-201ENST00000460609 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
RN7SL254P-201ENST00000460609 ABCC9O60706 1549 aa13.96□□□□□ -0.17
RN7SL254P-201ENST00000460609 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
RN7SL254P-201ENST00000460609 NACADO15069 1562 aa13.27□□□□□ -0.29
RN7SL254P-201ENST00000460609 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
RN7SL254P-201ENST00000460609 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
RN7SL254P-201ENST00000460609 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
RN7SL254P-201ENST00000460609 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
RN7SL254P-201ENST00000460609 UNC13AQ9UPW8 1703 aa12.93□□□□□ -0.34
RN7SL254P-201ENST00000460609 ZCCHC6Q5VYS8 1495 aaKnown RBP12.92□□□□□ -0.34
RN7SL254P-201ENST00000460609 DCAF1Q9Y4B6 1507 aa12.92□□□□□ -0.34
RN7SL254P-201ENST00000460609 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
RN7SL254P-201ENST00000460609 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
RN7SL254P-201ENST00000460609 SCRIBQ14160 1630 aa12.73□□□□□ -0.37
RN7SL254P-201ENST00000460609 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
RN7SL254P-201ENST00000460609 CC2D2AQ9P2K1 1620 aa12.62□□□□□ -0.39
RN7SL254P-201ENST00000460609 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
RN7SL254P-201ENST00000460609 EIF4G1Q04637 1599 aaKnown RBP12.6□□□□□ -0.39
RN7SL254P-201ENST00000460609 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
RN7SL254P-201ENST00000460609 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
RN7SL254P-201ENST00000460609 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
RN7SL254P-201ENST00000460609 SMARCA4P51532 1647 aa12.15□□□□□ -0.46
RN7SL254P-201ENST00000460609 HMGXB3Q12766 1538 aa12.15□□□□□ -0.46
RN7SL254P-201ENST00000460609 BAZ1AQ9NRL2 1556 aaPredicted RBP12.14□□□□□ -0.47
RN7SL254P-201ENST00000460609 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
RN7SL254P-201ENST00000460609 CUX2O14529 1486 aa12.1□□□□□ -0.47
RN7SL254P-201ENST00000460609 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.47
RN7SL254P-201ENST00000460609 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
RN7SL254P-201ENST00000460609 MROH2BQ7Z745 1585 aa11.97□□□□□ -0.49
RN7SL254P-201ENST00000460609 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.49
RN7SL254P-201ENST00000460609 NESP48681 1621 aa11.96□□□□□ -0.5
RN7SL254P-201ENST00000460609 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
RN7SL254P-201ENST00000460609 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
RN7SL254P-201ENST00000460609 THOC2Q8NI27 1593 aaKnown RBP11.87□□□□□ -0.51
RN7SL254P-201ENST00000460609 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
RN7SL254P-201ENST00000460609 WIZO95785 1651 aa11.83□□□□□ -0.52
RN7SL254P-201ENST00000460609 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
RN7SL254P-201ENST00000460609 MRC2Q9UBG0 1479 aa11.79□□□□□ -0.52
RN7SL254P-201ENST00000460609 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
RN7SL254P-201ENST00000460609 CEP164Q9UPV0 1460 aa11.75□□□□□ -0.53
RN7SL254P-201ENST00000460609 WDR62O43379 1518 aa11.75□□□□□ -0.53
RN7SL254P-201ENST00000460609 TOP2AP11388 1531 aaKnown RBP11.73□□□□□ -0.53
RN7SL254P-201ENST00000460609 FANCD2Q9BXW9 1451 aa11.72□□□□□ -0.53
RN7SL254P-201ENST00000460609 CFTRP13569 1480 aa11.71□□□□□ -0.53
RN7SL254P-201ENST00000460609 PRDM2Q13029 1718 aa11.59□□□□□ -0.55
RN7SL254P-201ENST00000460609 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.56
RN7SL254P-201ENST00000460609 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
RN7SL254P-201ENST00000460609 OSCARQ8IYS5 282 aa11.54□□□□□ -0.56
RN7SL254P-201ENST00000460609 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
RN7SL254P-201ENST00000460609 IFT140Q96RY7 1462 aa11.52□□□□□ -0.56
RN7SL254P-201ENST00000460609 TOPBP1Q92547 1522 aa11.49□□□□□ -0.57
RN7SL254P-201ENST00000460609 AEBP2Q6ZN18 517 aaPredicted RBP11.47□□□□□ -0.57
RN7SL254P-201ENST00000460609 DNMBPQ6XZF7 1577 aa11.46□□□□□ -0.57
RN7SL254P-201ENST00000460609 ZNF608Q9ULD9 1512 aaPredicted RBP11.43□□□□□ -0.58
RN7SL254P-201ENST00000460609 EIF4G3O43432 1585 aaKnown RBP11.4□□□□□ -0.58
RN7SL254P-201ENST00000460609 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
RN7SL254P-201ENST00000460609 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
RN7SL254P-201ENST00000460609 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
RN7SL254P-201ENST00000460609 SOGA1O94964 1423 aa11.34□□□□□ -0.59
RN7SL254P-201ENST00000460609 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.6
RN7SL254P-201ENST00000460609 RIMBP3CA6NJZ7 1639 aa11.33□□□□□ -0.6
RN7SL254P-201ENST00000460609 RIMBP3BA6NNM3 1639 aa11.33□□□□□ -0.6
RN7SL254P-201ENST00000460609 RIMBP3Q9UFD9 1639 aa11.33□□□□□ -0.6
RN7SL254P-201ENST00000460609 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
RN7SL254P-201ENST00000460609 FBLN2P98095 1184 aa11.31□□□□□ -0.6
RN7SL254P-201ENST00000460609 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
RN7SL254P-201ENST00000460609 RAD54L2Q9Y4B4 1467 aa11.29□□□□□ -0.6
RN7SL254P-201ENST00000460609 CHD1O14646 1710 aa11.29□□□□□ -0.6
RN7SL254P-201ENST00000460609 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
RN7SL254P-201ENST00000460609 MAGI1Q96QZ7 1491 aaPredicted RBP11.26□□□□□ -0.61
RN7SL254P-201ENST00000460609 CUX1P39880 1505 aa11.26□□□□□ -0.61
RN7SL254P-201ENST00000460609 GRIN2BQ13224 1484 aa11.25□□□□□ -0.61
RN7SL254P-201ENST00000460609 SNAPC4Q5SXM2 1469 aa11.25□□□□□ -0.61
RN7SL254P-201ENST00000460609 SUPT5HO00267 1087 aaKnown RBP11.25□□□□□ -0.61
RN7SL254P-201ENST00000460609 CHMP7Q8WUX9 453 aaPredicted RBP11.25□□□□□ -0.61
RN7SL254P-201ENST00000460609 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
RN7SL254P-201ENST00000460609 SYNJ1O43426 1573 aa11.23□□□□□ -0.61
RN7SL254P-201ENST00000460609 SYNJ2O15056 1496 aa11.21□□□□□ -0.61
RN7SL254P-201ENST00000460609 ABCA10Q8WWZ4 1543 aa11.19□□□□□ -0.62
RN7SL254P-201ENST00000460609 GAPVD1Q14C86 1478 aa11.19□□□□□ -0.62
RN7SL254P-201ENST00000460609 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
RN7SL254P-201ENST00000460609 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
RN7SL254P-201ENST00000460609 CLASP1Q7Z460 1538 aa11.18□□□□□ -0.62
RN7SL254P-201ENST00000460609 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
RN7SL254P-201ENST00000460609 PBRM1Q86U86 1689 aa11.16□□□□□ -0.62
RN7SL254P-201ENST00000460609 ABCA5Q8WWZ7 1642 aa11.14□□□□□ -0.63
RN7SL254P-201ENST00000460609 TOP2BQ02880 1626 aa11.11□□□□□ -0.63
RN7SL254P-201ENST00000460609 BIVM-ERCC5R4GMW8 1640 aa11.1□□□□□ -0.63
RN7SL254P-201ENST00000460609 GRIN2AQ12879 1464 aa11.08□□□□□ -0.64
RN7SL254P-201ENST00000460609 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
RN7SL254P-201ENST00000460609 ADAMTS12P58397 1594 aa11.07□□□□□ -0.64
RN7SL254P-201ENST00000460609 ILDR1Q86SU0 546 aaPredicted RBP11.07□□□□□ -0.64
RN7SL254P-201ENST00000460609 ERICH3Q5RHP9 1530 aa11.06□□□□□ -0.64
RN7SL254P-201ENST00000460609 NUP160Q12769 1436 aa11.05□□□□□ -0.64
RN7SL254P-201ENST00000460609 CEP170Q5SW79 1584 aa11.01□□□□□ -0.65
RN7SL254P-201ENST00000460609 SHROOM2Q13796 1616 aa10.98□□□□□ -0.65
RN7SL254P-201ENST00000460609 ERCC6L2Q5T890 1561 aa10.94□□□□□ -0.66
RN7SL254P-201ENST00000460609 KIF27Q86VH2 1401 aa10.94□□□□□ -0.66
RN7SL254P-201ENST00000460609 PRG4Q92954 1404 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms