RNA–Protein interactions for RNA: ENST00000460370.1

CC2D1B-206, Transcript of coiled-coil and C2 domain containing 1B, humanhuman

TSL 2

Gene CC2D1B, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CC2D1B-206ENST00000460370 NISCHQ9Y2I1 1504 aa23.52■■□□□ 1.36
CC2D1B-206ENST00000460370 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
CC2D1B-206ENST00000460370 ABCC9O60706 1549 aa20.72■□□□□ 0.91
CC2D1B-206ENST00000460370 RB1CC1Q8TDY2 1594 aa19.79■□□□□ 0.76
CC2D1B-206ENST00000460370 NACADO15069 1562 aa19.71■□□□□ 0.75
CC2D1B-206ENST00000460370 UNC13AQ9UPW8 1703 aa19.61■□□□□ 0.73
CC2D1B-206ENST00000460370 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
CC2D1B-206ENST00000460370 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
CC2D1B-206ENST00000460370 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
CC2D1B-206ENST00000460370 DCAF1Q9Y4B6 1507 aa19.4■□□□□ 0.7
CC2D1B-206ENST00000460370 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
CC2D1B-206ENST00000460370 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
CC2D1B-206ENST00000460370 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
CC2D1B-206ENST00000460370 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
CC2D1B-206ENST00000460370 SHROOM4Q9ULL8 1493 aa18.91■□□□□ 0.62
CC2D1B-206ENST00000460370 EIF4G1Q04637 1599 aaKnown RBP18.77■□□□□ 0.6
CC2D1B-206ENST00000460370 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.6
CC2D1B-206ENST00000460370 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.56
CC2D1B-206ENST00000460370 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
CC2D1B-206ENST00000460370 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
CC2D1B-206ENST00000460370 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
CC2D1B-206ENST00000460370 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
CC2D1B-206ENST00000460370 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
CC2D1B-206ENST00000460370 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
CC2D1B-206ENST00000460370 HMGXB3Q12766 1538 aa18.14■□□□□ 0.49
CC2D1B-206ENST00000460370 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
CC2D1B-206ENST00000460370 WIZO95785 1651 aa18.04■□□□□ 0.48
CC2D1B-206ENST00000460370 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
CC2D1B-206ENST00000460370 NESP48681 1621 aa17.94■□□□□ 0.46
CC2D1B-206ENST00000460370 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
CC2D1B-206ENST00000460370 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
CC2D1B-206ENST00000460370 ERCC6Q03468 1493 aa17.77■□□□□ 0.44
CC2D1B-206ENST00000460370 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
CC2D1B-206ENST00000460370 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
CC2D1B-206ENST00000460370 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
CC2D1B-206ENST00000460370 CUX2O14529 1486 aa17.64■□□□□ 0.41
CC2D1B-206ENST00000460370 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
CC2D1B-206ENST00000460370 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
CC2D1B-206ENST00000460370 PDS5BQ9NTI5 1447 aa17.53■□□□□ 0.4
CC2D1B-206ENST00000460370 CFTRP13569 1480 aa17.52■□□□□ 0.4
CC2D1B-206ENST00000460370 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
CC2D1B-206ENST00000460370 MRC2Q9UBG0 1479 aa17.49■□□□□ 0.39
CC2D1B-206ENST00000460370 WDR62O43379 1518 aa17.48■□□□□ 0.39
CC2D1B-206ENST00000460370 DNAJC5Q9H3Z4 198 aa17.47■□□□□ 0.39
CC2D1B-206ENST00000460370 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
CC2D1B-206ENST00000460370 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
CC2D1B-206ENST00000460370 URB2Q14146 1524 aaKnown RBP17.39■□□□□ 0.37
CC2D1B-206ENST00000460370 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
CC2D1B-206ENST00000460370 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
CC2D1B-206ENST00000460370 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
CC2D1B-206ENST00000460370 ZNF608Q9ULD9 1512 aaPredicted RBP17.13■□□□□ 0.33
CC2D1B-206ENST00000460370 TARBP1Q13395 1621 aaKnown RBP17.1■□□□□ 0.33
CC2D1B-206ENST00000460370 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
CC2D1B-206ENST00000460370 CUX1P39880 1505 aa17.08■□□□□ 0.32
CC2D1B-206ENST00000460370 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
CC2D1B-206ENST00000460370 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
CC2D1B-206ENST00000460370 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
CC2D1B-206ENST00000460370 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
CC2D1B-206ENST00000460370 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
CC2D1B-206ENST00000460370 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
CC2D1B-206ENST00000460370 CHD1O14646 1710 aa16.97■□□□□ 0.31
CC2D1B-206ENST00000460370 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.34e-7■■■■□ 21.4
CC2D1B-206ENST00000460370 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
CC2D1B-206ENST00000460370 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
CC2D1B-206ENST00000460370 SOGA1O94964 1423 aa16.88■□□□□ 0.29
CC2D1B-206ENST00000460370 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
CC2D1B-206ENST00000460370 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
CC2D1B-206ENST00000460370 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
CC2D1B-206ENST00000460370 ABCA5Q8WWZ7 1642 aa16.85■□□□□ 0.29
CC2D1B-206ENST00000460370 SNAPC4Q5SXM2 1469 aa16.81■□□□□ 0.28
CC2D1B-206ENST00000460370 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
CC2D1B-206ENST00000460370 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
CC2D1B-206ENST00000460370 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
CC2D1B-206ENST00000460370 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
CC2D1B-206ENST00000460370 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
CC2D1B-206ENST00000460370 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
CC2D1B-206ENST00000460370 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
CC2D1B-206ENST00000460370 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
CC2D1B-206ENST00000460370 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.27
CC2D1B-206ENST00000460370 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
CC2D1B-206ENST00000460370 ADAMTS12P58397 1594 aa16.69■□□□□ 0.26
CC2D1B-206ENST00000460370 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
CC2D1B-206ENST00000460370 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
CC2D1B-206ENST00000460370 FBLN2P98095 1184 aa16.64■□□□□ 0.25
CC2D1B-206ENST00000460370 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
CC2D1B-206ENST00000460370 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
CC2D1B-206ENST00000460370 ARAP1Q96P48 1450 aa16.59■□□□□ 0.25
CC2D1B-206ENST00000460370 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
CC2D1B-206ENST00000460370 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
CC2D1B-206ENST00000460370 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
CC2D1B-206ENST00000460370 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
CC2D1B-206ENST00000460370 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
CC2D1B-206ENST00000460370 NUP160Q12769 1436 aa16.49■□□□□ 0.23
CC2D1B-206ENST00000460370 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
CC2D1B-206ENST00000460370 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
CC2D1B-206ENST00000460370 CUL7Q14999 1698 aa16.44■□□□□ 0.22
CC2D1B-206ENST00000460370 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
CC2D1B-206ENST00000460370 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
CC2D1B-206ENST00000460370 IGF1RP08069 1367 aa16.38■□□□□ 0.21
CC2D1B-206ENST00000460370 PRG4Q92954 1404 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms