RNA–Protein interactions for RNA: ENST00000460352.1

MMP11-205, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-205ENST00000460352 NISCHQ9Y2I1 1504 aa39.41■■■■□ 3.9
MMP11-205ENST00000460352 CCDC180Q9P1Z9 1646 aa34.79■■■■□ 3.16
MMP11-205ENST00000460352 ABCC9O60706 1549 aa33.33■■■□□ 2.93
MMP11-205ENST00000460352 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
MMP11-205ENST00000460352 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
MMP11-205ENST00000460352 DCAF1Q9Y4B6 1507 aa32.69■■■□□ 2.82
MMP11-205ENST00000460352 MYO15BQ96JP2 1530 aa32.61■■■□□ 2.81
MMP11-205ENST00000460352 NACADO15069 1562 aa32.59■■■□□ 2.81
MMP11-205ENST00000460352 RB1CC1Q8TDY2 1594 aa32.47■■■□□ 2.79
MMP11-205ENST00000460352 SCRIBQ14160 1630 aa31.72■■■□□ 2.67
MMP11-205ENST00000460352 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
MMP11-205ENST00000460352 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
MMP11-205ENST00000460352 PABPN1Q86U42 306 aaKnown RBP eCLIP31.28■■■□□ 2.6
MMP11-205ENST00000460352 BICRAQ9NZM4 1560 aa31.26■■■□□ 2.6
MMP11-205ENST00000460352 BAZ1AQ9NRL2 1556 aaPredicted RBP30.57■■■□□ 2.48
MMP11-205ENST00000460352 CECR2Q9BXF3 1484 aa30.52■■■□□ 2.48
MMP11-205ENST00000460352 EIF4G1Q04637 1599 aaKnown RBP30.48■■■□□ 2.47
MMP11-205ENST00000460352 SMARCA4P51532 1647 aa30.43■■■□□ 2.46
MMP11-205ENST00000460352 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.44
MMP11-205ENST00000460352 RSF1Q96T23 1441 aaPredicted RBP30.26■■■□□ 2.43
MMP11-205ENST00000460352 SMARCA2P51531 1590 aa30.2■■■□□ 2.42
MMP11-205ENST00000460352 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
MMP11-205ENST00000460352 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
MMP11-205ENST00000460352 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
MMP11-205ENST00000460352 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
MMP11-205ENST00000460352 WIZO95785 1651 aa30.04■■■□□ 2.4
MMP11-205ENST00000460352 NCAPD3P42695 1498 aa30.02■■■□□ 2.4
MMP11-205ENST00000460352 BAZ1BQ9UIG0 1483 aaKnown RBP29.96■■■□□ 2.39
MMP11-205ENST00000460352 HMGXB3Q12766 1538 aa29.93■■■□□ 2.38
MMP11-205ENST00000460352 DNAJC5BQ9UF47 199 aa29.86■■■□□ 2.37
MMP11-205ENST00000460352 TOP2AP11388 1531 aaKnown RBP29.81■■■□□ 2.36
MMP11-205ENST00000460352 CCDC88BA6NC98 1476 aa29.45■■■□□ 2.31
MMP11-205ENST00000460352 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
MMP11-205ENST00000460352 LAMC3Q9Y6N6 1575 aa29.16■■■□□ 2.26
MMP11-205ENST00000460352 CFTRP13569 1480 aa29.14■■■□□ 2.26
MMP11-205ENST00000460352 PDS5BQ9NTI5 1447 aa29.01■■■□□ 2.23
MMP11-205ENST00000460352 PRDM2Q13029 1718 aa29■■■□□ 2.23
MMP11-205ENST00000460352 NESP48681 1621 aa28.97■■■□□ 2.23
MMP11-205ENST00000460352 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
MMP11-205ENST00000460352 ERCC6Q03468 1493 aa28.81■■■□□ 2.2
MMP11-205ENST00000460352 CEP164Q9UPV0 1460 aa28.78■■■□□ 2.2
MMP11-205ENST00000460352 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.18
MMP11-205ENST00000460352 ABCC8Q09428 1581 aa28.66■■■□□ 2.18
MMP11-205ENST00000460352 WRNQ14191 1432 aaPredicted RBP eCLIP28.6■■■□□ 2.17
MMP11-205ENST00000460352 MRC2Q9UBG0 1479 aa28.58■■■□□ 2.17
MMP11-205ENST00000460352 TRIM41Q8WV44 630 aa28.51■■■□□ 2.15
MMP11-205ENST00000460352 DNMBPQ6XZF7 1577 aa28.49■■■□□ 2.15
MMP11-205ENST00000460352 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.14
MMP11-205ENST00000460352 TOPBP1Q92547 1522 aa28.43■■■□□ 2.14
MMP11-205ENST00000460352 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
MMP11-205ENST00000460352 TOP2BQ02880 1626 aa28.42■■■□□ 2.14
MMP11-205ENST00000460352 CUX1P39880 1505 aa28.42■■■□□ 2.14
MMP11-205ENST00000460352 WDR62O43379 1518 aa28.41■■■□□ 2.14
MMP11-205ENST00000460352 THOC2Q8NI27 1593 aaKnown RBP28.4■■■□□ 2.14
MMP11-205ENST00000460352 BIVM-ERCC5R4GMW8 1640 aa28.39■■■□□ 2.13
MMP11-205ENST00000460352 SYNJ1O43426 1573 aa28.35■■■□□ 2.13
MMP11-205ENST00000460352 FGD5Q6ZNL6 1462 aa28.26■■■□□ 2.11
MMP11-205ENST00000460352 CUX2O14529 1486 aa28.22■■■□□ 2.11
MMP11-205ENST00000460352 POLA1P09884 1462 aaPredicted RBP28.21■■■□□ 2.11
MMP11-205ENST00000460352 SOGA1O94964 1423 aa28.21■■■□□ 2.11
MMP11-205ENST00000460352 IFT140Q96RY7 1462 aa28.16■■■□□ 2.1
MMP11-205ENST00000460352 RAD54L2Q9Y4B4 1467 aa28.06■■■□□ 2.08
MMP11-205ENST00000460352 ABCA10Q8WWZ4 1543 aa28.05■■■□□ 2.08
MMP11-205ENST00000460352 TARBP1Q13395 1621 aaKnown RBP28.03■■■□□ 2.08
MMP11-205ENST00000460352 KIF27Q86VH2 1401 aa28.01■■■□□ 2.08
MMP11-205ENST00000460352 WDR97A6NE52 1622 aa28■■■□□ 2.07
MMP11-205ENST00000460352 EEA1Q15075 1411 aa27.97■■■□□ 2.07
MMP11-205ENST00000460352 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
MMP11-205ENST00000460352 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.05
MMP11-205ENST00000460352 ZNF608Q9ULD9 1512 aaPredicted RBP27.83■■■□□ 2.05
MMP11-205ENST00000460352 AQRO60306 1485 aaKnown RBP eCLIP27.82■■■□□ 2.04
MMP11-205ENST00000460352 ABCA5Q8WWZ7 1642 aa27.81■■■□□ 2.04
MMP11-205ENST00000460352 CSRNP3Q8WYN3 585 aa27.8■■■□□ 2.04
MMP11-205ENST00000460352 GRIN2BQ13224 1484 aa27.8■■■□□ 2.04
MMP11-205ENST00000460352 EIF4G3O43432 1585 aaKnown RBP27.79■■■□□ 2.04
MMP11-205ENST00000460352 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
MMP11-205ENST00000460352 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
MMP11-205ENST00000460352 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
MMP11-205ENST00000460352 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
MMP11-205ENST00000460352 IGF1RP08069 1367 aa27.72■■■□□ 2.03
MMP11-205ENST00000460352 CUL7Q14999 1698 aa27.66■■■□□ 2.02
MMP11-205ENST00000460352 MAGI1Q96QZ7 1491 aaPredicted RBP27.66■■■□□ 2.02
MMP11-205ENST00000460352 CARMIL1Q5VZK9 1371 aa27.63■■■□□ 2.01
MMP11-205ENST00000460352 FHAD1B1AJZ9 1412 aa27.6■■■□□ 2.01
MMP11-205ENST00000460352 SNAPC4Q5SXM2 1469 aa27.58■■■□□ 2.01
MMP11-205ENST00000460352 CHMP7Q8WUX9 453 aaPredicted RBP27.57■■■□□ 2
MMP11-205ENST00000460352 RAPGEF2Q9Y4G8 1499 aa27.54■■■□□ 2
MMP11-205ENST00000460352 SYNJ2O15056 1496 aa27.52■■■□□ 2
MMP11-205ENST00000460352 PRXQ9BXM0 1461 aa27.52■■■□□ 2
MMP11-205ENST00000460352 FBLN2P98095 1184 aa27.52■■■□□ 2
MMP11-205ENST00000460352 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
MMP11-205ENST00000460352 KIF21BO75037 1637 aa27.5■■□□□ 1.99
MMP11-205ENST00000460352 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
MMP11-205ENST00000460352 UBTFP17480 764 aaKnown RBP27.42■■□□□ 1.98
MMP11-205ENST00000460352 GRIN2AQ12879 1464 aa27.39■■□□□ 1.98
MMP11-205ENST00000460352 EHMT2Q96KQ7 1210 aa27.34■■□□□ 1.97
MMP11-205ENST00000460352 CHD1O14646 1710 aa27.33■■□□□ 1.96
MMP11-205ENST00000460352 OSCARQ8IYS5 282 aa27.28■■□□□ 1.96
MMP11-205ENST00000460352 LOC105371045A0A1W2PR82 267 aa27.26■■□□□ 1.95
MMP11-205ENST00000460352 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms