RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.09
NUCB1-208ENST00000460125 ABCC9O60706 1549 aa26.02■■□□□ 1.76
NUCB1-208ENST00000460125 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
NUCB1-208ENST00000460125 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
NUCB1-208ENST00000460125 RB1CC1Q8TDY2 1594 aa24.49■■□□□ 1.51
NUCB1-208ENST00000460125 NACADO15069 1562 aa24.2■■□□□ 1.46
NUCB1-208ENST00000460125 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
NUCB1-208ENST00000460125 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
NUCB1-208ENST00000460125 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
NUCB1-208ENST00000460125 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
NUCB1-208ENST00000460125 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
NUCB1-208ENST00000460125 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
NUCB1-208ENST00000460125 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
NUCB1-208ENST00000460125 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
NUCB1-208ENST00000460125 DNAJC5Q9H3Z4 198 aa23.4■■□□□ 1.34
NUCB1-208ENST00000460125 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
NUCB1-208ENST00000460125 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
NUCB1-208ENST00000460125 ZCCHC6Q5VYS8 1495 aaKnown RBP23.14■■□□□ 1.29
NUCB1-208ENST00000460125 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
NUCB1-208ENST00000460125 CUX2O14529 1486 aa22.68■■□□□ 1.22
NUCB1-208ENST00000460125 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
NUCB1-208ENST00000460125 NCAPD3P42695 1498 aa22.39■■□□□ 1.17
NUCB1-208ENST00000460125 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
NUCB1-208ENST00000460125 NESP48681 1621 aa22.19■■□□□ 1.14
NUCB1-208ENST00000460125 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
NUCB1-208ENST00000460125 SMARCA2P51531 1590 aa22.09■■□□□ 1.13
NUCB1-208ENST00000460125 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
NUCB1-208ENST00000460125 THOC2Q8NI27 1593 aaKnown RBP22.05■■□□□ 1.12
NUCB1-208ENST00000460125 SMARCA4P51532 1647 aa22■■□□□ 1.11
NUCB1-208ENST00000460125 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
NUCB1-208ENST00000460125 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
NUCB1-208ENST00000460125 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
NUCB1-208ENST00000460125 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
NUCB1-208ENST00000460125 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
NUCB1-208ENST00000460125 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
NUCB1-208ENST00000460125 CADPSQ9ULU8 1353 aa21.68■■□□□ 1.06
NUCB1-208ENST00000460125 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
NUCB1-208ENST00000460125 WDR62O43379 1518 aa21.64■■□□□ 1.05
NUCB1-208ENST00000460125 MROH2BQ7Z745 1585 aa21.63■■□□□ 1.05
NUCB1-208ENST00000460125 OSCARQ8IYS5 282 aa21.58■■□□□ 1.05
NUCB1-208ENST00000460125 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
NUCB1-208ENST00000460125 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.02
NUCB1-208ENST00000460125 WIZO95785 1651 aa21.31■■□□□ 1
NUCB1-208ENST00000460125 CFTRP13569 1480 aa21.3■■□□□ 1
NUCB1-208ENST00000460125 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
NUCB1-208ENST00000460125 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
NUCB1-208ENST00000460125 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
NUCB1-208ENST00000460125 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
NUCB1-208ENST00000460125 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
NUCB1-208ENST00000460125 CYB5RLQ6IPT4 315 aa21.11■□□□□ 0.97
NUCB1-208ENST00000460125 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
NUCB1-208ENST00000460125 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
NUCB1-208ENST00000460125 TRHP20396 242 aaPredicted RBP21.05■□□□□ 0.96
NUCB1-208ENST00000460125 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
NUCB1-208ENST00000460125 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
NUCB1-208ENST00000460125 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
NUCB1-208ENST00000460125 TOPBP1Q92547 1522 aa20.93■□□□□ 0.94
NUCB1-208ENST00000460125 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
NUCB1-208ENST00000460125 EIF4G3O43432 1585 aaKnown RBP20.9■□□□□ 0.94
NUCB1-208ENST00000460125 AEBP2Q6ZN18 517 aaPredicted RBP20.87■□□□□ 0.93
NUCB1-208ENST00000460125 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
NUCB1-208ENST00000460125 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.93
NUCB1-208ENST00000460125 CHD1O14646 1710 aa20.84■□□□□ 0.93
NUCB1-208ENST00000460125 FBLN2P98095 1184 aa20.82■□□□□ 0.92
NUCB1-208ENST00000460125 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
NUCB1-208ENST00000460125 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
NUCB1-208ENST00000460125 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
NUCB1-208ENST00000460125 POLA1P09884 1462 aaPredicted RBP20.68■□□□□ 0.9
NUCB1-208ENST00000460125 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.9
NUCB1-208ENST00000460125 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
NUCB1-208ENST00000460125 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
NUCB1-208ENST00000460125 SOGA1O94964 1423 aa20.6■□□□□ 0.89
NUCB1-208ENST00000460125 SNAPC4Q5SXM2 1469 aa20.59■□□□□ 0.89
NUCB1-208ENST00000460125 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
NUCB1-208ENST00000460125 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
NUCB1-208ENST00000460125 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
NUCB1-208ENST00000460125 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
NUCB1-208ENST00000460125 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
NUCB1-208ENST00000460125 GRIN2BQ13224 1484 aa20.47■□□□□ 0.87
NUCB1-208ENST00000460125 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
NUCB1-208ENST00000460125 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
NUCB1-208ENST00000460125 CUX1P39880 1505 aa20.34■□□□□ 0.85
NUCB1-208ENST00000460125 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
NUCB1-208ENST00000460125 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
NUCB1-208ENST00000460125 ABCA10Q8WWZ4 1543 aa20.21■□□□□ 0.83
NUCB1-208ENST00000460125 GRIN2AQ12879 1464 aa20.19■□□□□ 0.82
NUCB1-208ENST00000460125 CEP170Q5SW79 1584 aa20.19■□□□□ 0.82
NUCB1-208ENST00000460125 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
NUCB1-208ENST00000460125 NUP160Q12769 1436 aa20.17■□□□□ 0.82
NUCB1-208ENST00000460125 KIF13AQ9H1H9 1805 aa20.13■□□□□ 0.81
NUCB1-208ENST00000460125 SHROOM2Q13796 1616 aa20.11■□□□□ 0.81
NUCB1-208ENST00000460125 ADAMTS12P58397 1594 aa20.08■□□□□ 0.8
NUCB1-208ENST00000460125 KDM4FA0A1W2PPD8 638 aa20.05■□□□□ 0.8
NUCB1-208ENST00000460125 FAM69CQ0P6D2 419 aa20.05■□□□□ 0.8
NUCB1-208ENST00000460125 FHAD1B1AJZ9 1412 aa20.04■□□□□ 0.8
NUCB1-208ENST00000460125 ILDR1Q86SU0 546 aaPredicted RBP20.04■□□□□ 0.8
NUCB1-208ENST00000460125 ABCC10Q5T3U5 1492 aa20.03■□□□□ 0.8
NUCB1-208ENST00000460125 PRG4Q92954 1404 aaPredicted RBP20.02■□□□□ 0.79
NUCB1-208ENST00000460125 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
NUCB1-208ENST00000460125 JPH4Q96JJ6 628 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms