RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 AEBP2Q6ZN18 517 aaPredicted RBP23.64■■□□□ 1.37
NCSTN-209ENST00000459963 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
NCSTN-209ENST00000459963 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
NCSTN-209ENST00000459963 ABCC9O60706 1549 aa20.85■□□□□ 0.93
NCSTN-209ENST00000459963 DNAJC5BQ9UF47 199 aa20.59■□□□□ 0.89
NCSTN-209ENST00000459963 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
NCSTN-209ENST00000459963 PHF23Q9BUL5 403 aaPredicted RBP19.97■□□□□ 0.79
NCSTN-209ENST00000459963 DNAJC5Q9H3Z4 198 aa19.76■□□□□ 0.75
NCSTN-209ENST00000459963 CCDC180Q9P1Z9 1646 aa19.71■□□□□ 0.75
NCSTN-209ENST00000459963 RB1CC1Q8TDY2 1594 aa19.33■□□□□ 0.69
NCSTN-209ENST00000459963 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
NCSTN-209ENST00000459963 NACADO15069 1562 aa18.93■□□□□ 0.62
NCSTN-209ENST00000459963 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
NCSTN-209ENST00000459963 UNC13AQ9UPW8 1703 aa18.85■□□□□ 0.61
NCSTN-209ENST00000459963 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
NCSTN-209ENST00000459963 FOXD1Q16676 465 aa18.77■□□□□ 0.6
NCSTN-209ENST00000459963 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.6
NCSTN-209ENST00000459963 DCAF8L2P0C7V8 631 aa18.6■□□□□ 0.57
NCSTN-209ENST00000459963 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.55
NCSTN-209ENST00000459963 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.55
NCSTN-209ENST00000459963 CUX2O14529 1486 aa18.46■□□□□ 0.54
NCSTN-209ENST00000459963 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
NCSTN-209ENST00000459963 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
NCSTN-209ENST00000459963 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
NCSTN-209ENST00000459963 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
NCSTN-209ENST00000459963 SCRIBQ14160 1630 aa17.92■□□□□ 0.46
NCSTN-209ENST00000459963 PIAS4Q8N2W9 510 aaPredicted RBP17.71■□□□□ 0.43
NCSTN-209ENST00000459963 ADRA2BP18089 450 aa17.69■□□□□ 0.42
NCSTN-209ENST00000459963 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
NCSTN-209ENST00000459963 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
NCSTN-209ENST00000459963 THOC2Q8NI27 1593 aaKnown RBP17.63■□□□□ 0.41
NCSTN-209ENST00000459963 MSH5O43196 834 aa17.6■□□□□ 0.41
NCSTN-209ENST00000459963 NESP48681 1621 aa17.58■□□□□ 0.41
NCSTN-209ENST00000459963 ZCCHC6Q5VYS8 1495 aaKnown RBP17.52■□□□□ 0.4
NCSTN-209ENST00000459963 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
NCSTN-209ENST00000459963 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
NCSTN-209ENST00000459963 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
NCSTN-209ENST00000459963 BAZ1AQ9NRL2 1556 aaPredicted RBP17.39■□□□□ 0.37
NCSTN-209ENST00000459963 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
NCSTN-209ENST00000459963 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
NCSTN-209ENST00000459963 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
NCSTN-209ENST00000459963 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
NCSTN-209ENST00000459963 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
NCSTN-209ENST00000459963 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
NCSTN-209ENST00000459963 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
NCSTN-209ENST00000459963 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
NCSTN-209ENST00000459963 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
NCSTN-209ENST00000459963 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
NCSTN-209ENST00000459963 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
NCSTN-209ENST00000459963 WDR62O43379 1518 aa17.14■□□□□ 0.33
NCSTN-209ENST00000459963 ILDR1Q86SU0 546 aaPredicted RBP17.1■□□□□ 0.33
NCSTN-209ENST00000459963 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
NCSTN-209ENST00000459963 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
NCSTN-209ENST00000459963 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
NCSTN-209ENST00000459963 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
NCSTN-209ENST00000459963 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
NCSTN-209ENST00000459963 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
NCSTN-209ENST00000459963 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
NCSTN-209ENST00000459963 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
NCSTN-209ENST00000459963 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
NCSTN-209ENST00000459963 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
NCSTN-209ENST00000459963 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
NCSTN-209ENST00000459963 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
NCSTN-209ENST00000459963 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
NCSTN-209ENST00000459963 CHD1O14646 1710 aa16.53■□□□□ 0.24
NCSTN-209ENST00000459963 MROH2BQ7Z745 1585 aa16.5■□□□□ 0.23
NCSTN-209ENST00000459963 CFTRP13569 1480 aa16.48■□□□□ 0.23
NCSTN-209ENST00000459963 FBLN2P98095 1184 aa16.47■□□□□ 0.23
NCSTN-209ENST00000459963 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
NCSTN-209ENST00000459963 KDM4FA0A1W2PPD8 638 aa16.43■□□□□ 0.22
NCSTN-209ENST00000459963 CLASP1Q7Z460 1538 aa16.36■□□□□ 0.21
NCSTN-209ENST00000459963 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.218e-7■■■■□ 24.7
NCSTN-209ENST00000459963 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
NCSTN-209ENST00000459963 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
NCSTN-209ENST00000459963 TOPBP1Q92547 1522 aa16.27■□□□□ 0.2
NCSTN-209ENST00000459963 FBXO41Q8TF61 875 aa16.25■□□□□ 0.19
NCSTN-209ENST00000459963 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
NCSTN-209ENST00000459963 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
NCSTN-209ENST00000459963 WIZO95785 1651 aa16.23■□□□□ 0.19
NCSTN-209ENST00000459963 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
NCSTN-209ENST00000459963 KIF13AQ9H1H9 1805 aa16.19■□□□□ 0.18
NCSTN-209ENST00000459963 LMTK3Q96Q04 1460 aa16.17■□□□□ 0.18
NCSTN-209ENST00000459963 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
NCSTN-209ENST00000459963 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
NCSTN-209ENST00000459963 PRDM2Q13029 1718 aa16.15■□□□□ 0.18
NCSTN-209ENST00000459963 HECW2Q9P2P5 1572 aa16.15■□□□□ 0.18
NCSTN-209ENST00000459963 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
NCSTN-209ENST00000459963 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
NCSTN-209ENST00000459963 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
NCSTN-209ENST00000459963 SOCS7O14512 581 aa16.09■□□□□ 0.17
NCSTN-209ENST00000459963 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
NCSTN-209ENST00000459963 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
NCSTN-209ENST00000459963 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
NCSTN-209ENST00000459963 MAGI1Q96QZ7 1491 aaPredicted RBP16.05■□□□□ 0.16
NCSTN-209ENST00000459963 KDM6BO15054 1643 aa16.05■□□□□ 0.16
NCSTN-209ENST00000459963 POLA1P09884 1462 aaPredicted RBP16.03■□□□□ 0.16
NCSTN-209ENST00000459963 FAM69CQ0P6D2 419 aa16.03■□□□□ 0.16
NCSTN-209ENST00000459963 SYNJ2O15056 1496 aa16.02■□□□□ 0.15
NCSTN-209ENST00000459963 ADGRL1O94910 1474 aa16.01■□□□□ 0.15
NCSTN-209ENST00000459963 RAD54L2Q9Y4B4 1467 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms