RNA–Protein interactions for RNA: ENST00000459859.1

RPL3-207, Transcript of ribosomal protein L3, humanhuman

TSL 3

Gene RPL3, Length 447 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-207ENST00000459859 NISCHQ9Y2I1 1504 aa47.9■■■■■ 5.26
RPL3-207ENST00000459859 CCDC180Q9P1Z9 1646 aa42.52■■■■■ 4.4
RPL3-207ENST00000459859 ABCC9O60706 1549 aa41.44■■■■■ 4.22
RPL3-207ENST00000459859 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4.01
RPL3-207ENST00000459859 ZCCHC6Q5VYS8 1495 aaKnown RBP39.95■■■■□ 3.99
RPL3-207ENST00000459859 RB1CC1Q8TDY2 1594 aa39.95■■■■□ 3.99
RPL3-207ENST00000459859 NACADO15069 1562 aa39.93■■■■□ 3.98
RPL3-207ENST00000459859 MYO15BQ96JP2 1530 aa39.7■■■■□ 3.95
RPL3-207ENST00000459859 DCAF1Q9Y4B6 1507 aa39.61■■■■□ 3.93
RPL3-207ENST00000459859 UNC13AQ9UPW8 1703 aa39■■■■□ 3.83
RPL3-207ENST00000459859 SCRIBQ14160 1630 aa38.86■■■■□ 3.81
RPL3-207ENST00000459859 PABPN1Q86U42 306 aaKnown RBP eCLIP38.75■■■■□ 3.79
RPL3-207ENST00000459859 BICRAQ9NZM4 1560 aa38.65■■■■□ 3.78
RPL3-207ENST00000459859 SHROOM4Q9ULL8 1493 aa38.3■■■■□ 3.72
RPL3-207ENST00000459859 DNAJC5BQ9UF47 199 aa37.73■■■■□ 3.63
RPL3-207ENST00000459859 EIF4G1Q04637 1599 aaKnown RBP37.66■■■■□ 3.62
RPL3-207ENST00000459859 CC2D2AQ9P2K1 1620 aa37.47■■■■□ 3.59
RPL3-207ENST00000459859 CECR2Q9BXF3 1484 aa37.29■■■■□ 3.56
RPL3-207ENST00000459859 SMARCA4P51532 1647 aa37.15■■■■□ 3.54
RPL3-207ENST00000459859 BAZ1AQ9NRL2 1556 aaPredicted RBP37.15■■■■□ 3.54
RPL3-207ENST00000459859 MROH2BQ7Z745 1585 aa36.92■■■■□ 3.5
RPL3-207ENST00000459859 SMARCA2P51531 1590 aa36.88■■■■□ 3.49
RPL3-207ENST00000459859 ATAD2BQ9ULI0 1458 aa36.87■■■■□ 3.49
RPL3-207ENST00000459859 NCAPD3P42695 1498 aa36.8■■■■□ 3.48
RPL3-207ENST00000459859 PEG3Q9GZU2 1588 aa36.73■■■■□ 3.47
RPL3-207ENST00000459859 HMGXB3Q12766 1538 aa36.67■■■■□ 3.46
RPL3-207ENST00000459859 BAZ1BQ9UIG0 1483 aaKnown RBP36.64■■■■□ 3.46
RPL3-207ENST00000459859 RSF1Q96T23 1441 aaPredicted RBP36.57■■■■□ 3.44
RPL3-207ENST00000459859 WIZO95785 1651 aa36.56■■■■□ 3.44
RPL3-207ENST00000459859 TOP2AP11388 1531 aaKnown RBP36.19■■■■□ 3.38
RPL3-207ENST00000459859 SUPT5HO00267 1087 aaKnown RBP35.92■■■■□ 3.34
RPL3-207ENST00000459859 NESP48681 1621 aa35.89■■■■□ 3.34
RPL3-207ENST00000459859 LAMC3Q9Y6N6 1575 aa35.85■■■■□ 3.33
RPL3-207ENST00000459859 CADPSQ9ULU8 1353 aa35.76■■■■□ 3.32
RPL3-207ENST00000459859 ERCC6Q03468 1493 aa35.75■■■■□ 3.31
RPL3-207ENST00000459859 CCDC88BA6NC98 1476 aa35.74■■■■□ 3.31
RPL3-207ENST00000459859 PDS5BQ9NTI5 1447 aa35.62■■■■□ 3.29
RPL3-207ENST00000459859 CFTRP13569 1480 aa35.58■■■■□ 3.29
RPL3-207ENST00000459859 KIF21AQ7Z4S6 1674 aa35.49■■■■□ 3.27
RPL3-207ENST00000459859 FANCD2Q9BXW9 1451 aa35.39■■■■□ 3.26
RPL3-207ENST00000459859 PRDM2Q13029 1718 aa35.38■■■■□ 3.25
RPL3-207ENST00000459859 CEP164Q9UPV0 1460 aa35.35■■■■□ 3.25
RPL3-207ENST00000459859 THOC2Q8NI27 1593 aaKnown RBP35.3■■■■□ 3.24
RPL3-207ENST00000459859 MRC2Q9UBG0 1479 aa35.23■■■■□ 3.23
RPL3-207ENST00000459859 CUX2O14529 1486 aa35.22■■■■□ 3.23
RPL3-207ENST00000459859 WDR62O43379 1518 aa35.07■■■■□ 3.21
RPL3-207ENST00000459859 URB2Q14146 1524 aaKnown RBP34.99■■■■□ 3.19
RPL3-207ENST00000459859 ABCC8Q09428 1581 aa34.86■■■■□ 3.17
RPL3-207ENST00000459859 TOPBP1Q92547 1522 aa34.83■■■■□ 3.17
RPL3-207ENST00000459859 DNMBPQ6XZF7 1577 aa34.83■■■■□ 3.17
RPL3-207ENST00000459859 CUX1P39880 1505 aa34.63■■■■□ 3.13
RPL3-207ENST00000459859 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
RPL3-207ENST00000459859 POLA1P09884 1462 aaPredicted RBP34.55■■■■□ 3.12
RPL3-207ENST00000459859 WRNQ14191 1432 aaPredicted RBP eCLIP34.53■■■■□ 3.125e-6■□□□□ 8.4
RPL3-207ENST00000459859 FGD5Q6ZNL6 1462 aa34.52■■■■□ 3.12
RPL3-207ENST00000459859 SOGA1O94964 1423 aa34.43■■■■□ 3.1
RPL3-207ENST00000459859 TOP2BQ02880 1626 aa34.41■■■■□ 3.1
RPL3-207ENST00000459859 TARBP1Q13395 1621 aaKnown RBP34.41■■■■□ 3.1
RPL3-207ENST00000459859 SYNJ1O43426 1573 aa34.4■■■■□ 3.1
RPL3-207ENST00000459859 RAD54L2Q9Y4B4 1467 aa34.4■■■■□ 3.1
RPL3-207ENST00000459859 BIVM-ERCC5R4GMW8 1640 aa34.4■■■■□ 3.1
RPL3-207ENST00000459859 ZNF608Q9ULD9 1512 aaPredicted RBP34.37■■■■□ 3.09
RPL3-207ENST00000459859 EIF4G3O43432 1585 aaKnown RBP34.28■■■■□ 3.08
RPL3-207ENST00000459859 AQRO60306 1485 aaKnown RBP eCLIP34.22■■■■□ 3.073e-8■■■■□ 26.7
RPL3-207ENST00000459859 TDRD9Q8NDG6 1382 aaKnown RBP34.21■■■■□ 3.07
RPL3-207ENST00000459859 WDR97A6NE52 1622 aa34.19■■■■□ 3.06
RPL3-207ENST00000459859 ABCA10Q8WWZ4 1543 aa34.16■■■■□ 3.06
RPL3-207ENST00000459859 GAPVD1Q14C86 1478 aa34.04■■■■□ 3.04
RPL3-207ENST00000459859 ABCA5Q8WWZ7 1642 aa34.01■■■■□ 3.04
RPL3-207ENST00000459859 GRIN2BQ13224 1484 aa34.01■■■■□ 3.03
RPL3-207ENST00000459859 PBRM1Q86U86 1689 aa33.97■■■■□ 3.03
RPL3-207ENST00000459859 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.02
RPL3-207ENST00000459859 TRIM41Q8WV44 630 aa33.9■■■■□ 3.02
RPL3-207ENST00000459859 MAGI1Q96QZ7 1491 aaPredicted RBP33.89■■■■□ 3.02
RPL3-207ENST00000459859 FBLN2P98095 1184 aa33.86■■■■□ 3.01
RPL3-207ENST00000459859 DNAJC5Q9H3Z4 198 aa33.86■■■■□ 3.01
RPL3-207ENST00000459859 OSCARQ8IYS5 282 aa33.83■■■■□ 3.01
RPL3-207ENST00000459859 CHD1O14646 1710 aa33.82■■■■□ 3
RPL3-207ENST00000459859 KIF27Q86VH2 1401 aa33.81■■■■□ 3
RPL3-207ENST00000459859 CHMP7Q8WUX9 453 aaPredicted RBP33.77■■■■□ 3
RPL3-207ENST00000459859 ERICH3Q5RHP9 1530 aa33.77■■■■□ 3
RPL3-207ENST00000459859 SYNJ2O15056 1496 aa33.75■■■□□ 2.99
RPL3-207ENST00000459859 ADAMTS12P58397 1594 aa33.7■■■□□ 2.99
RPL3-207ENST00000459859 FHAD1B1AJZ9 1412 aa33.65■■■□□ 2.98
RPL3-207ENST00000459859 IGF1RP08069 1367 aa33.57■■■□□ 2.96
RPL3-207ENST00000459859 GRIN2AQ12879 1464 aa33.56■■■□□ 2.96
RPL3-207ENST00000459859 CHIC1Q5VXU3 224 aa33.56■■■□□ 2.96
RPL3-207ENST00000459859 CUL7Q14999 1698 aa33.54■■■□□ 2.96
RPL3-207ENST00000459859 RUSC2Q8N2Y8 1516 aa33.5■■■□□ 2.95
RPL3-207ENST00000459859 CARMIL1Q5VZK9 1371 aa33.43■■■□□ 2.94
RPL3-207ENST00000459859 CLASP1Q7Z460 1538 aa33.41■■■□□ 2.94
RPL3-207ENST00000459859 CEP170Q5SW79 1584 aa33.38■■■□□ 2.93
RPL3-207ENST00000459859 NUP160Q12769 1436 aa33.37■■■□□ 2.93
RPL3-207ENST00000459859 EEA1Q15075 1411 aa33.29■■■□□ 2.92
RPL3-207ENST00000459859 ARHGEF11O15085 1522 aa33.27■■■□□ 2.92
RPL3-207ENST00000459859 RAPGEF2Q9Y4G8 1499 aa33.26■■■□□ 2.92
RPL3-207ENST00000459859 RIMBP3CA6NJZ7 1639 aa33.25■■■□□ 2.91
RPL3-207ENST00000459859 RIMBP3BA6NNM3 1639 aa33.25■■■□□ 2.91
RPL3-207ENST00000459859 RIMBP3Q9UFD9 1639 aa33.25■■■□□ 2.91
RPL3-207ENST00000459859 FAM9AQ8IZU1 332 aaPredicted RBP33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms