RNA–Protein interactions for RNA: ENST00000459764.1

TWNK-203, Transcript of twinkle mtDNA helicase, humanhuman

TSL 3

Gene TWNK, Length 327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-203ENST00000459764 NISCHQ9Y2I1 1504 aa20.27■□□□□ 0.83
TWNK-203ENST00000459764 ABCC9O60706 1549 aa18.65■□□□□ 0.58
TWNK-203ENST00000459764 CCDC180Q9P1Z9 1646 aa18.26■□□□□ 0.51
TWNK-203ENST00000459764 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
TWNK-203ENST00000459764 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
TWNK-203ENST00000459764 NACADO15069 1562 aa17.43■□□□□ 0.38
TWNK-203ENST00000459764 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
TWNK-203ENST00000459764 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
TWNK-203ENST00000459764 MYO15BQ96JP2 1530 aa17.12■□□□□ 0.33
TWNK-203ENST00000459764 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.32
TWNK-203ENST00000459764 UNC13AQ9UPW8 1703 aa17.06■□□□□ 0.32
TWNK-203ENST00000459764 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
TWNK-203ENST00000459764 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
TWNK-203ENST00000459764 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
TWNK-203ENST00000459764 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
TWNK-203ENST00000459764 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
TWNK-203ENST00000459764 ZCCHC6Q5VYS8 1495 aaKnown RBP16.7■□□□□ 0.26
TWNK-203ENST00000459764 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
TWNK-203ENST00000459764 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
TWNK-203ENST00000459764 CUX2O14529 1486 aa16.27■□□□□ 0.19
TWNK-203ENST00000459764 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
TWNK-203ENST00000459764 ERCC6Q03468 1493 aa16.15■□□□□ 0.18
TWNK-203ENST00000459764 ATAD2BQ9ULI0 1458 aa16.01■□□□□ 0.15
TWNK-203ENST00000459764 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
TWNK-203ENST00000459764 HMGXB3Q12766 1538 aa15.92■□□□□ 0.14
TWNK-203ENST00000459764 NESP48681 1621 aa15.91■□□□□ 0.14
TWNK-203ENST00000459764 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
TWNK-203ENST00000459764 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
TWNK-203ENST00000459764 TRIM41Q8WV44 630 aa15.78■□□□□ 0.12
TWNK-203ENST00000459764 THOC2Q8NI27 1593 aaKnown RBP15.78■□□□□ 0.12
TWNK-203ENST00000459764 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
TWNK-203ENST00000459764 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
TWNK-203ENST00000459764 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
TWNK-203ENST00000459764 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
TWNK-203ENST00000459764 CADPSQ9ULU8 1353 aa15.64■□□□□ 0.09
TWNK-203ENST00000459764 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
TWNK-203ENST00000459764 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
TWNK-203ENST00000459764 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.09
TWNK-203ENST00000459764 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
TWNK-203ENST00000459764 WDR62O43379 1518 aa15.53■□□□□ 0.08
TWNK-203ENST00000459764 CEP164Q9UPV0 1460 aa15.44■□□□□ 0.06
TWNK-203ENST00000459764 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
TWNK-203ENST00000459764 CFTRP13569 1480 aa15.36■□□□□ 0.05
TWNK-203ENST00000459764 WIZO95785 1651 aa15.32■□□□□ 0.04
TWNK-203ENST00000459764 URB2Q14146 1524 aaKnown RBP15.28■□□□□ 0.04
TWNK-203ENST00000459764 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.03
TWNK-203ENST00000459764 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.03
TWNK-203ENST00000459764 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.03
TWNK-203ENST00000459764 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
TWNK-203ENST00000459764 IFT140Q96RY7 1462 aa15.18■□□□□ 0.02
TWNK-203ENST00000459764 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
TWNK-203ENST00000459764 CYB5RLQ6IPT4 315 aa15.17■□□□□ 0.02
TWNK-203ENST00000459764 TOP2AP11388 1531 aaKnown RBP15.16■□□□□ 0.02
TWNK-203ENST00000459764 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
TWNK-203ENST00000459764 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
TWNK-203ENST00000459764 TOPBP1Q92547 1522 aa15.07■□□□□ 0
TWNK-203ENST00000459764 ABCC8Q09428 1581 aa15.07■□□□□ 0
TWNK-203ENST00000459764 CCDC88BA6NC98 1476 aa15.03■□□□□ -0
TWNK-203ENST00000459764 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.01
TWNK-203ENST00000459764 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
TWNK-203ENST00000459764 FBLN2P98095 1184 aa15□□□□□ -0.01
TWNK-203ENST00000459764 PRDM2Q13029 1718 aa15□□□□□ -0.01
TWNK-203ENST00000459764 EIF4G3O43432 1585 aaKnown RBP14.98□□□□□ -0.01
TWNK-203ENST00000459764 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
TWNK-203ENST00000459764 AEBP2Q6ZN18 517 aaPredicted RBP14.94□□□□□ -0.02
TWNK-203ENST00000459764 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
TWNK-203ENST00000459764 CHD1O14646 1710 aa14.89□□□□□ -0.03
TWNK-203ENST00000459764 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
TWNK-203ENST00000459764 TDRD9Q8NDG6 1382 aaKnown RBP14.87□□□□□ -0.03
TWNK-203ENST00000459764 SOGA1O94964 1423 aa14.87□□□□□ -0.03
TWNK-203ENST00000459764 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
TWNK-203ENST00000459764 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
TWNK-203ENST00000459764 CLASP1Q7Z460 1538 aa14.81□□□□□ -0.04
TWNK-203ENST00000459764 SNAPC4Q5SXM2 1469 aa14.8□□□□□ -0.04
TWNK-203ENST00000459764 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
TWNK-203ENST00000459764 MAGI1Q96QZ7 1491 aaPredicted RBP14.78□□□□□ -0.04
TWNK-203ENST00000459764 SYNJ1O43426 1573 aa14.77□□□□□ -0.04
TWNK-203ENST00000459764 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
TWNK-203ENST00000459764 SYNJ2O15056 1496 aa14.74□□□□□ -0.05
TWNK-203ENST00000459764 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
TWNK-203ENST00000459764 GAPVD1Q14C86 1478 aa14.72□□□□□ -0.05
TWNK-203ENST00000459764 CUX1P39880 1505 aa14.65□□□□□ -0.06
TWNK-203ENST00000459764 ABCA10Q8WWZ4 1543 aa14.58□□□□□ -0.08
TWNK-203ENST00000459764 GRIN2AQ12879 1464 aa14.54□□□□□ -0.08
TWNK-203ENST00000459764 NUP160Q12769 1436 aa14.53□□□□□ -0.08
TWNK-203ENST00000459764 PBRM1Q86U86 1689 aa14.52□□□□□ -0.08
TWNK-203ENST00000459764 ERCC6L2Q5T890 1561 aa14.52□□□□□ -0.08
TWNK-203ENST00000459764 ABCA5Q8WWZ7 1642 aa14.51□□□□□ -0.09
TWNK-203ENST00000459764 CEP170Q5SW79 1584 aa14.5□□□□□ -0.09
TWNK-203ENST00000459764 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
TWNK-203ENST00000459764 FHAD1B1AJZ9 1412 aa14.47□□□□□ -0.09
TWNK-203ENST00000459764 JPH4Q96JJ6 628 aa14.45□□□□□ -0.1
TWNK-203ENST00000459764 SHROOM2Q13796 1616 aa14.44□□□□□ -0.1
TWNK-203ENST00000459764 FAM69CQ0P6D2 419 aa14.44□□□□□ -0.1
TWNK-203ENST00000459764 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
TWNK-203ENST00000459764 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
TWNK-203ENST00000459764 PRG4Q92954 1404 aaPredicted RBP14.42□□□□□ -0.1
TWNK-203ENST00000459764 ABCC10Q5T3U5 1492 aa14.4□□□□□ -0.1
TWNK-203ENST00000459764 ERICH3Q5RHP9 1530 aa14.38□□□□□ -0.11
TWNK-203ENST00000459764 KIF13AQ9H1H9 1805 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms