RNA–Protein interactions for RNA: ENST00000458715.5

COL16A1-205, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-205ENST00000458715 NISCHQ9Y2I1 1504 aa39.39■■■■□ 3.9
COL16A1-205ENST00000458715 CCDC180Q9P1Z9 1646 aa35.16■■■■□ 3.22
COL16A1-205ENST00000458715 ABCC9O60706 1549 aa34.84■■■■□ 3.17
COL16A1-205ENST00000458715 RB1CC1Q8TDY2 1594 aa33.37■■■□□ 2.93
COL16A1-205ENST00000458715 NACADO15069 1562 aa33.25■■■□□ 2.91
COL16A1-205ENST00000458715 DCAF8L2P0C7V8 631 aa33.19■■■□□ 2.9
COL16A1-205ENST00000458715 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
COL16A1-205ENST00000458715 ZCCHC6Q5VYS8 1495 aaKnown RBP32.68■■■□□ 2.82
COL16A1-205ENST00000458715 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
COL16A1-205ENST00000458715 PABPN1Q86U42 306 aaKnown RBP eCLIP32.53■■■□□ 2.8
COL16A1-205ENST00000458715 DNAJC5BQ9UF47 199 aa32.39■■■□□ 2.78
COL16A1-205ENST00000458715 UNC13AQ9UPW8 1703 aa32.39■■■□□ 2.78
COL16A1-205ENST00000458715 BICRAQ9NZM4 1560 aa32.27■■■□□ 2.76
COL16A1-205ENST00000458715 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
COL16A1-205ENST00000458715 SCRIBQ14160 1630 aa31.99■■■□□ 2.71
COL16A1-205ENST00000458715 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
COL16A1-205ENST00000458715 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
COL16A1-205ENST00000458715 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
COL16A1-205ENST00000458715 NCAPD3P42695 1498 aa30.71■■■□□ 2.51
COL16A1-205ENST00000458715 ATAD2BQ9ULI0 1458 aa30.61■■■□□ 2.49
COL16A1-205ENST00000458715 SMARCA4P51532 1647 aa30.59■■■□□ 2.49
COL16A1-205ENST00000458715 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
COL16A1-205ENST00000458715 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
COL16A1-205ENST00000458715 HMGXB3Q12766 1538 aa30.46■■■□□ 2.47
COL16A1-205ENST00000458715 PEG3Q9GZU2 1588 aa30.36■■■□□ 2.45
COL16A1-205ENST00000458715 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
COL16A1-205ENST00000458715 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
COL16A1-205ENST00000458715 ERCC6Q03468 1493 aa30.14■■■□□ 2.42
COL16A1-205ENST00000458715 CUX2O14529 1486 aa29.99■■■□□ 2.39
COL16A1-205ENST00000458715 NESP48681 1621 aa29.97■■■□□ 2.39
COL16A1-205ENST00000458715 LAMC3Q9Y6N6 1575 aa29.92■■■□□ 2.38
COL16A1-205ENST00000458715 WIZO95785 1651 aa29.89■■■□□ 2.38
COL16A1-205ENST00000458715 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
COL16A1-205ENST00000458715 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
COL16A1-205ENST00000458715 CADPSQ9ULU8 1353 aa29.8■■■□□ 2.36
COL16A1-205ENST00000458715 DNAJC5Q9H3Z4 198 aa29.64■■■□□ 2.34
COL16A1-205ENST00000458715 TOP2AP11388 1531 aaKnown RBP29.62■■■□□ 2.33
COL16A1-205ENST00000458715 THOC2Q8NI27 1593 aaKnown RBP29.59■■■□□ 2.33
COL16A1-205ENST00000458715 KIF21AQ7Z4S6 1674 aa29.54■■■□□ 2.32
COL16A1-205ENST00000458715 CFTRP13569 1480 aa29.49■■■□□ 2.31
COL16A1-205ENST00000458715 MRC2Q9UBG0 1479 aa29.46■■■□□ 2.31
COL16A1-205ENST00000458715 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
COL16A1-205ENST00000458715 FANCD2Q9BXW9 1451 aa29.41■■■□□ 2.3
COL16A1-205ENST00000458715 WDR62O43379 1518 aa29.34■■■□□ 2.29
COL16A1-205ENST00000458715 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
COL16A1-205ENST00000458715 URB2Q14146 1524 aaKnown RBP29.08■■■□□ 2.25
COL16A1-205ENST00000458715 PRDM2Q13029 1718 aa29.07■■■□□ 2.24
COL16A1-205ENST00000458715 ABCC8Q09428 1581 aa28.96■■■□□ 2.23
COL16A1-205ENST00000458715 TOPBP1Q92547 1522 aa28.86■■■□□ 2.21
COL16A1-205ENST00000458715 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
COL16A1-205ENST00000458715 SUPT5HO00267 1087 aaKnown RBP28.81■■■□□ 2.2
COL16A1-205ENST00000458715 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
COL16A1-205ENST00000458715 OSCARQ8IYS5 282 aa28.76■■■□□ 2.19
COL16A1-205ENST00000458715 ZNF608Q9ULD9 1512 aaPredicted RBP28.66■■■□□ 2.18
COL16A1-205ENST00000458715 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
COL16A1-205ENST00000458715 SOGA1O94964 1423 aa28.54■■■□□ 2.16
COL16A1-205ENST00000458715 TARBP1Q13395 1621 aaKnown RBP28.53■■■□□ 2.16
COL16A1-205ENST00000458715 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.15
COL16A1-205ENST00000458715 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
COL16A1-205ENST00000458715 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.14
COL16A1-205ENST00000458715 RAD54L2Q9Y4B4 1467 aa28.45■■■□□ 2.14
COL16A1-205ENST00000458715 CUX1P39880 1505 aa28.43■■■□□ 2.14
COL16A1-205ENST00000458715 TRIM41Q8WV44 630 aa28.41■■■□□ 2.14
COL16A1-205ENST00000458715 TDRD9Q8NDG6 1382 aaKnown RBP28.4■■■□□ 2.14
COL16A1-205ENST00000458715 WDR97A6NE52 1622 aa28.37■■■□□ 2.13
COL16A1-205ENST00000458715 FBLN2P98095 1184 aa28.33■■■□□ 2.13
COL16A1-205ENST00000458715 GRIN2BQ13224 1484 aa28.25■■■□□ 2.11
COL16A1-205ENST00000458715 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
COL16A1-205ENST00000458715 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
COL16A1-205ENST00000458715 WRNQ14191 1432 aaPredicted RBP eCLIP28.21■■■□□ 2.11
COL16A1-205ENST00000458715 ABCA10Q8WWZ4 1543 aa28.19■■■□□ 2.1
COL16A1-205ENST00000458715 SNAPC4Q5SXM2 1469 aa28.19■■■□□ 2.1
COL16A1-205ENST00000458715 GAPVD1Q14C86 1478 aa28.17■■■□□ 2.1
COL16A1-205ENST00000458715 CHD1O14646 1710 aa28.16■■■□□ 2.1
COL16A1-205ENST00000458715 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
COL16A1-205ENST00000458715 RIMBP3CA6NJZ7 1639 aa28.13■■■□□ 2.09
COL16A1-205ENST00000458715 RIMBP3BA6NNM3 1639 aa28.13■■■□□ 2.09
COL16A1-205ENST00000458715 RIMBP3Q9UFD9 1639 aa28.13■■■□□ 2.09
COL16A1-205ENST00000458715 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
COL16A1-205ENST00000458715 SYNJ2O15056 1496 aa28.1■■■□□ 2.09
COL16A1-205ENST00000458715 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
COL16A1-205ENST00000458715 ABCA5Q8WWZ7 1642 aa28.03■■■□□ 2.08
COL16A1-205ENST00000458715 SYNJ1O43426 1573 aa28.02■■■□□ 2.08
COL16A1-205ENST00000458715 CYB5RLQ6IPT4 315 aa28.01■■■□□ 2.07
COL16A1-205ENST00000458715 PBRM1Q86U86 1689 aa27.98■■■□□ 2.07
COL16A1-205ENST00000458715 CLASP1Q7Z460 1538 aa27.94■■■□□ 2.06
COL16A1-205ENST00000458715 FHAD1B1AJZ9 1412 aa27.86■■■□□ 2.05
COL16A1-205ENST00000458715 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
COL16A1-205ENST00000458715 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
COL16A1-205ENST00000458715 GRIN2AQ12879 1464 aa27.84■■■□□ 2.05
COL16A1-205ENST00000458715 ADAMTS12P58397 1594 aa27.79■■■□□ 2.04
COL16A1-205ENST00000458715 NUP160Q12769 1436 aa27.75■■■□□ 2.03
COL16A1-205ENST00000458715 KIF27Q86VH2 1401 aa27.68■■■□□ 2.02
COL16A1-205ENST00000458715 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
COL16A1-205ENST00000458715 TRHP20396 242 aaPredicted RBP27.61■■■□□ 2.01
COL16A1-205ENST00000458715 IGF1RP08069 1367 aa27.6■■■□□ 2.01
COL16A1-205ENST00000458715 JPH4Q96JJ6 628 aa27.55■■■□□ 2
COL16A1-205ENST00000458715 SHROOM2Q13796 1616 aa27.52■■■□□ 2
COL16A1-205ENST00000458715 PRG4Q92954 1404 aaPredicted RBP27.48■■□□□ 1.99
COL16A1-205ENST00000458715 CUL7Q14999 1698 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms