RNA–Protein interactions for RNA: ENST00000458297.3

ATP9B-203, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 1 (best) BASIC

Gene ATP9B, Length 1,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-203ENST00000458297 NISCHQ9Y2I1 1504 aa26.23■■□□□ 1.79
ATP9B-203ENST00000458297 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
ATP9B-203ENST00000458297 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
ATP9B-203ENST00000458297 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
ATP9B-203ENST00000458297 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
ATP9B-203ENST00000458297 ABCC9O60706 1549 aa21.84■■□□□ 1.09
ATP9B-203ENST00000458297 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
ATP9B-203ENST00000458297 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
ATP9B-203ENST00000458297 NACADO15069 1562 aa21.48■■□□□ 1.03
ATP9B-203ENST00000458297 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
ATP9B-203ENST00000458297 RB1CC1Q8TDY2 1594 aa21.34■■□□□ 1.01
ATP9B-203ENST00000458297 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
ATP9B-203ENST00000458297 SHROOM4Q9ULL8 1493 aa21.1■□□□□ 0.97
ATP9B-203ENST00000458297 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
ATP9B-203ENST00000458297 BICRAQ9NZM4 1560 aa20.73■□□□□ 0.91
ATP9B-203ENST00000458297 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
ATP9B-203ENST00000458297 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
ATP9B-203ENST00000458297 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
ATP9B-203ENST00000458297 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
ATP9B-203ENST00000458297 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
ATP9B-203ENST00000458297 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
ATP9B-203ENST00000458297 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
ATP9B-203ENST00000458297 WIZO95785 1651 aa20.12■□□□□ 0.81
ATP9B-203ENST00000458297 EIF4G1Q04637 1599 aaKnown RBP20.09■□□□□ 0.81
ATP9B-203ENST00000458297 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
ATP9B-203ENST00000458297 SMARCA2P51531 1590 aa19.93■□□□□ 0.78
ATP9B-203ENST00000458297 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
ATP9B-203ENST00000458297 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
ATP9B-203ENST00000458297 PHF23Q9BUL5 403 aaPredicted RBP19.88■□□□□ 0.77
ATP9B-203ENST00000458297 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
ATP9B-203ENST00000458297 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
ATP9B-203ENST00000458297 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
ATP9B-203ENST00000458297 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
ATP9B-203ENST00000458297 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
ATP9B-203ENST00000458297 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
ATP9B-203ENST00000458297 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
ATP9B-203ENST00000458297 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
ATP9B-203ENST00000458297 CFTRP13569 1480 aa19.28■□□□□ 0.68
ATP9B-203ENST00000458297 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
ATP9B-203ENST00000458297 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
ATP9B-203ENST00000458297 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
ATP9B-203ENST00000458297 NESP48681 1621 aa19.14■□□□□ 0.65
ATP9B-203ENST00000458297 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
ATP9B-203ENST00000458297 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
ATP9B-203ENST00000458297 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
ATP9B-203ENST00000458297 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
ATP9B-203ENST00000458297 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.64
ATP9B-203ENST00000458297 TOP2BQ02880 1626 aa19■□□□□ 0.63
ATP9B-203ENST00000458297 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
ATP9B-203ENST00000458297 CUX1P39880 1505 aa18.96■□□□□ 0.63
ATP9B-203ENST00000458297 PDS5BQ9NTI5 1447 aa18.95■□□□□ 0.62
ATP9B-203ENST00000458297 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
ATP9B-203ENST00000458297 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
ATP9B-203ENST00000458297 URB2Q14146 1524 aaKnown RBP18.82■□□□□ 0.6
ATP9B-203ENST00000458297 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
ATP9B-203ENST00000458297 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
ATP9B-203ENST00000458297 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.6
ATP9B-203ENST00000458297 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.6
ATP9B-203ENST00000458297 WDR62O43379 1518 aa18.73■□□□□ 0.59
ATP9B-203ENST00000458297 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
ATP9B-203ENST00000458297 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
ATP9B-203ENST00000458297 SOGA1O94964 1423 aa18.71■□□□□ 0.59
ATP9B-203ENST00000458297 WDR97A6NE52 1622 aa18.71■□□□□ 0.59
ATP9B-203ENST00000458297 EEA1Q15075 1411 aa18.67■□□□□ 0.58
ATP9B-203ENST00000458297 RUSC2Q8N2Y8 1516 aa18.67■□□□□ 0.58
ATP9B-203ENST00000458297 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
ATP9B-203ENST00000458297 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
ATP9B-203ENST00000458297 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
ATP9B-203ENST00000458297 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
ATP9B-203ENST00000458297 CUX2O14529 1486 aa18.57■□□□□ 0.56
ATP9B-203ENST00000458297 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
ATP9B-203ENST00000458297 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
ATP9B-203ENST00000458297 KIF21BO75037 1637 aa18.53■□□□□ 0.56
ATP9B-203ENST00000458297 IFT140Q96RY7 1462 aa18.49■□□□□ 0.55
ATP9B-203ENST00000458297 CSRNP3Q8WYN3 585 aa18.49■□□□□ 0.55
ATP9B-203ENST00000458297 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
ATP9B-203ENST00000458297 PRXQ9BXM0 1461 aa18.43■□□□□ 0.54
ATP9B-203ENST00000458297 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
ATP9B-203ENST00000458297 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
ATP9B-203ENST00000458297 CUL7Q14999 1698 aa18.42■□□□□ 0.54
ATP9B-203ENST00000458297 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
ATP9B-203ENST00000458297 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
ATP9B-203ENST00000458297 GOLGA3Q08378 1498 aa18.41■□□□□ 0.54
ATP9B-203ENST00000458297 IGF1RP08069 1367 aa18.39■□□□□ 0.53
ATP9B-203ENST00000458297 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
ATP9B-203ENST00000458297 ZNF608Q9ULD9 1512 aaPredicted RBP18.38■□□□□ 0.53
ATP9B-203ENST00000458297 RAPGEF2Q9Y4G8 1499 aa18.37■□□□□ 0.53
ATP9B-203ENST00000458297 FOXD1Q16676 465 aa18.34■□□□□ 0.53
ATP9B-203ENST00000458297 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.53
ATP9B-203ENST00000458297 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
ATP9B-203ENST00000458297 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
ATP9B-203ENST00000458297 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
ATP9B-203ENST00000458297 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
ATP9B-203ENST00000458297 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.51
ATP9B-203ENST00000458297 TNIKQ9UKE5 1360 aa18.27■□□□□ 0.51
ATP9B-203ENST00000458297 CTTNBP2Q8WZ74 1663 aa18.24■□□□□ 0.51
ATP9B-203ENST00000458297 SNAPC4Q5SXM2 1469 aa18.22■□□□□ 0.51
ATP9B-203ENST00000458297 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
ATP9B-203ENST00000458297 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
ATP9B-203ENST00000458297 UBTFP17480 764 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms