RNA–Protein interactions for RNA: ENST00000458159.5

ACTA2-203, Transcript of actin, alpha 2, smooth muscle, aorta, humanhuman

TSL 3

Gene ACTA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA2-203ENST00000458159 NISCHQ9Y2I1 1504 aa35.05■■■■□ 3.2
ACTA2-203ENST00000458159 CCDC180Q9P1Z9 1646 aa31.16■■■□□ 2.58
ACTA2-203ENST00000458159 ABCC9O60706 1549 aa30.5■■■□□ 2.47
ACTA2-203ENST00000458159 DCAF8L2P0C7V8 631 aa29.4■■■□□ 2.3
ACTA2-203ENST00000458159 RB1CC1Q8TDY2 1594 aa29.33■■■□□ 2.29
ACTA2-203ENST00000458159 NACADO15069 1562 aa29.28■■■□□ 2.28
ACTA2-203ENST00000458159 ZCCHC6Q5VYS8 1495 aaKnown RBP29.18■■■□□ 2.26
ACTA2-203ENST00000458159 MYO15BQ96JP2 1530 aa29.05■■■□□ 2.24
ACTA2-203ENST00000458159 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
ACTA2-203ENST00000458159 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
ACTA2-203ENST00000458159 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
ACTA2-203ENST00000458159 SCRIBQ14160 1630 aa28.48■■■□□ 2.15
ACTA2-203ENST00000458159 BICRAQ9NZM4 1560 aa28.41■■■□□ 2.14
ACTA2-203ENST00000458159 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
ACTA2-203ENST00000458159 DNAJC5BQ9UF47 199 aa27.94■■■□□ 2.06
ACTA2-203ENST00000458159 EIF4G1Q04637 1599 aaKnown RBP27.68■■■□□ 2.02
ACTA2-203ENST00000458159 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
ACTA2-203ENST00000458159 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
ACTA2-203ENST00000458159 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
ACTA2-203ENST00000458159 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
ACTA2-203ENST00000458159 ATAD2BQ9ULI0 1458 aa27.03■■□□□ 1.92
ACTA2-203ENST00000458159 MROH2BQ7Z745 1585 aa27.02■■□□□ 1.92
ACTA2-203ENST00000458159 SMARCA2P51531 1590 aa27.01■■□□□ 1.92
ACTA2-203ENST00000458159 NCAPD3P42695 1498 aa27■■□□□ 1.91
ACTA2-203ENST00000458159 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
ACTA2-203ENST00000458159 HMGXB3Q12766 1538 aa26.87■■□□□ 1.89
ACTA2-203ENST00000458159 BAZ1BQ9UIG0 1483 aaKnown RBP26.84■■□□□ 1.89
ACTA2-203ENST00000458159 WIZO95785 1651 aa26.77■■□□□ 1.88
ACTA2-203ENST00000458159 RSF1Q96T23 1441 aaPredicted RBP26.71■■□□□ 1.87
ACTA2-203ENST00000458159 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
ACTA2-203ENST00000458159 NESP48681 1621 aa26.39■■□□□ 1.81
ACTA2-203ENST00000458159 LAMC3Q9Y6N6 1575 aa26.31■■□□□ 1.8
ACTA2-203ENST00000458159 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
ACTA2-203ENST00000458159 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
ACTA2-203ENST00000458159 SUPT5HO00267 1087 aaKnown RBP26.15■■□□□ 1.78
ACTA2-203ENST00000458159 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
ACTA2-203ENST00000458159 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.77
ACTA2-203ENST00000458159 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
ACTA2-203ENST00000458159 CFTRP13569 1480 aa26.07■■□□□ 1.76
ACTA2-203ENST00000458159 THOC2Q8NI27 1593 aaKnown RBP25.96■■□□□ 1.75
ACTA2-203ENST00000458159 CUX2O14529 1486 aa25.96■■□□□ 1.75
ACTA2-203ENST00000458159 FANCD2Q9BXW9 1451 aa25.95■■□□□ 1.74
ACTA2-203ENST00000458159 PRDM2Q13029 1718 aa25.93■■□□□ 1.74
ACTA2-203ENST00000458159 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
ACTA2-203ENST00000458159 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
ACTA2-203ENST00000458159 WDR62O43379 1518 aa25.76■■□□□ 1.71
ACTA2-203ENST00000458159 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
ACTA2-203ENST00000458159 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
ACTA2-203ENST00000458159 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
ACTA2-203ENST00000458159 DNMBPQ6XZF7 1577 aa25.51■■□□□ 1.67
ACTA2-203ENST00000458159 IFT140Q96RY7 1462 aa25.36■■□□□ 1.65
ACTA2-203ENST00000458159 CUX1P39880 1505 aa25.36■■□□□ 1.65
ACTA2-203ENST00000458159 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
ACTA2-203ENST00000458159 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
ACTA2-203ENST00000458159 ZNF608Q9ULD9 1512 aaPredicted RBP25.26■■□□□ 1.63
ACTA2-203ENST00000458159 TARBP1Q13395 1621 aaKnown RBP25.25■■□□□ 1.63
ACTA2-203ENST00000458159 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
ACTA2-203ENST00000458159 SOGA1O94964 1423 aa25.23■■□□□ 1.63
ACTA2-203ENST00000458159 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.63
ACTA2-203ENST00000458159 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
ACTA2-203ENST00000458159 SYNJ1O43426 1573 aa25.15■■□□□ 1.62
ACTA2-203ENST00000458159 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
ACTA2-203ENST00000458159 DNAJC5Q9H3Z4 198 aa25.14■■□□□ 1.62
ACTA2-203ENST00000458159 TOP2BQ02880 1626 aa25.14■■□□□ 1.61
ACTA2-203ENST00000458159 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.61
ACTA2-203ENST00000458159 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
ACTA2-203ENST00000458159 WDR97A6NE52 1622 aa25.05■■□□□ 1.6
ACTA2-203ENST00000458159 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
ACTA2-203ENST00000458159 GAPVD1Q14C86 1478 aa24.94■■□□□ 1.58
ACTA2-203ENST00000458159 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
ACTA2-203ENST00000458159 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
ACTA2-203ENST00000458159 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
ACTA2-203ENST00000458159 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
ACTA2-203ENST00000458159 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.58
ACTA2-203ENST00000458159 FBLN2P98095 1184 aa24.88■■□□□ 1.57
ACTA2-203ENST00000458159 CHD1O14646 1710 aa24.87■■□□□ 1.57
ACTA2-203ENST00000458159 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.57
ACTA2-203ENST00000458159 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
ACTA2-203ENST00000458159 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
ACTA2-203ENST00000458159 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
ACTA2-203ENST00000458159 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
ACTA2-203ENST00000458159 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
ACTA2-203ENST00000458159 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
ACTA2-203ENST00000458159 FHAD1B1AJZ9 1412 aa24.63■■□□□ 1.53
ACTA2-203ENST00000458159 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
ACTA2-203ENST00000458159 IGF1RP08069 1367 aa24.55■■□□□ 1.52
ACTA2-203ENST00000458159 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
ACTA2-203ENST00000458159 RIMBP3CA6NJZ7 1639 aa24.53■■□□□ 1.52
ACTA2-203ENST00000458159 RIMBP3BA6NNM3 1639 aa24.53■■□□□ 1.52
ACTA2-203ENST00000458159 RIMBP3Q9UFD9 1639 aa24.53■■□□□ 1.52
ACTA2-203ENST00000458159 CUL7Q14999 1698 aa24.52■■□□□ 1.52
ACTA2-203ENST00000458159 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
ACTA2-203ENST00000458159 CEP170Q5SW79 1584 aa24.48■■□□□ 1.51
ACTA2-203ENST00000458159 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
ACTA2-203ENST00000458159 NUP160Q12769 1436 aa24.46■■□□□ 1.51
ACTA2-203ENST00000458159 CARMIL1Q5VZK9 1371 aa24.44■■□□□ 1.5
ACTA2-203ENST00000458159 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
ACTA2-203ENST00000458159 CYB5RLQ6IPT4 315 aa24.32■■□□□ 1.48
ACTA2-203ENST00000458159 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
ACTA2-203ENST00000458159 RAPGEF2Q9Y4G8 1499 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 770.7 ms