RNA–Protein interactions for RNA: ENST00000458128.2

PGAM4-201, Transcript of phosphoglycerate mutase family member 4, humanhuman

APPRIS P1 BASIC

Gene PGAM4, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM4-201ENST00000458128 NISCHQ9Y2I1 1504 aa24.99■■□□□ 1.59
PGAM4-201ENST00000458128 ABCC9O60706 1549 aa23.18■■□□□ 1.3
PGAM4-201ENST00000458128 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
PGAM4-201ENST00000458128 DNAJC5BQ9UF47 199 aa22.68■■□□□ 1.22
PGAM4-201ENST00000458128 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
PGAM4-201ENST00000458128 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
PGAM4-201ENST00000458128 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
PGAM4-201ENST00000458128 NACADO15069 1562 aa21.5■■□□□ 1.03
PGAM4-201ENST00000458128 DNAJC5Q9H3Z4 198 aa21.5■■□□□ 1.03
PGAM4-201ENST00000458128 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
PGAM4-201ENST00000458128 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
PGAM4-201ENST00000458128 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
PGAM4-201ENST00000458128 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
PGAM4-201ENST00000458128 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
PGAM4-201ENST00000458128 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
PGAM4-201ENST00000458128 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
PGAM4-201ENST00000458128 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
PGAM4-201ENST00000458128 ZCCHC6Q5VYS8 1495 aaKnown RBP20.64■□□□□ 0.89
PGAM4-201ENST00000458128 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
PGAM4-201ENST00000458128 CUX2O14529 1486 aa20.32■□□□□ 0.84
PGAM4-201ENST00000458128 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
PGAM4-201ENST00000458128 ERCC6Q03468 1493 aa20.08■□□□□ 0.81
PGAM4-201ENST00000458128 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
PGAM4-201ENST00000458128 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
PGAM4-201ENST00000458128 SMARCA2P51531 1590 aa19.68■□□□□ 0.74
PGAM4-201ENST00000458128 SMARCA4P51532 1647 aa19.68■□□□□ 0.74
PGAM4-201ENST00000458128 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
PGAM4-201ENST00000458128 NESP48681 1621 aa19.64■□□□□ 0.73
PGAM4-201ENST00000458128 THOC2Q8NI27 1593 aaKnown RBP19.59■□□□□ 0.73
PGAM4-201ENST00000458128 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
PGAM4-201ENST00000458128 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
PGAM4-201ENST00000458128 BAZ1BQ9UIG0 1483 aaKnown RBP19.5■□□□□ 0.71
PGAM4-201ENST00000458128 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
PGAM4-201ENST00000458128 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
PGAM4-201ENST00000458128 OSCARQ8IYS5 282 aa19.33■□□□□ 0.68
PGAM4-201ENST00000458128 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
PGAM4-201ENST00000458128 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
PGAM4-201ENST00000458128 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
PGAM4-201ENST00000458128 MRC2Q9UBG0 1479 aa19.17■□□□□ 0.66
PGAM4-201ENST00000458128 WDR62O43379 1518 aa19.17■□□□□ 0.66
PGAM4-201ENST00000458128 WIZO95785 1651 aa19.13■□□□□ 0.65
PGAM4-201ENST00000458128 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
PGAM4-201ENST00000458128 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
PGAM4-201ENST00000458128 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
PGAM4-201ENST00000458128 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
PGAM4-201ENST00000458128 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
PGAM4-201ENST00000458128 PRDM2Q13029 1718 aa19.08■□□□□ 0.64
PGAM4-201ENST00000458128 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
PGAM4-201ENST00000458128 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
PGAM4-201ENST00000458128 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
PGAM4-201ENST00000458128 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
PGAM4-201ENST00000458128 CFTRP13569 1480 aa18.84■□□□□ 0.61
PGAM4-201ENST00000458128 URB2Q14146 1524 aaKnown RBP18.81■□□□□ 0.6
PGAM4-201ENST00000458128 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
PGAM4-201ENST00000458128 CHD1O14646 1710 aa18.73■□□□□ 0.59
PGAM4-201ENST00000458128 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
PGAM4-201ENST00000458128 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
PGAM4-201ENST00000458128 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
PGAM4-201ENST00000458128 IFT140Q96RY7 1462 aa18.64■□□□□ 0.57
PGAM4-201ENST00000458128 ZNF608Q9ULD9 1512 aaPredicted RBP18.61■□□□□ 0.57
PGAM4-201ENST00000458128 ILDR1Q86SU0 546 aaPredicted RBP18.58■□□□□ 0.56
PGAM4-201ENST00000458128 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
PGAM4-201ENST00000458128 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
PGAM4-201ENST00000458128 ABCC8Q09428 1581 aa18.53■□□□□ 0.56
PGAM4-201ENST00000458128 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.55
PGAM4-201ENST00000458128 CCDC88BA6NC98 1476 aa18.49■□□□□ 0.55
PGAM4-201ENST00000458128 FBLN2P98095 1184 aa18.48■□□□□ 0.55
PGAM4-201ENST00000458128 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.53
PGAM4-201ENST00000458128 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
PGAM4-201ENST00000458128 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
PGAM4-201ENST00000458128 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
PGAM4-201ENST00000458128 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
PGAM4-201ENST00000458128 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
PGAM4-201ENST00000458128 RAD54L2Q9Y4B4 1467 aa18.25■□□□□ 0.51
PGAM4-201ENST00000458128 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
PGAM4-201ENST00000458128 SOGA1O94964 1423 aa18.21■□□□□ 0.51
PGAM4-201ENST00000458128 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
PGAM4-201ENST00000458128 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
PGAM4-201ENST00000458128 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
PGAM4-201ENST00000458128 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
PGAM4-201ENST00000458128 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.5
PGAM4-201ENST00000458128 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
PGAM4-201ENST00000458128 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
PGAM4-201ENST00000458128 KDM4FA0A1W2PPD8 638 aa18.12■□□□□ 0.49
PGAM4-201ENST00000458128 CUX1P39880 1505 aa18.11■□□□□ 0.49
PGAM4-201ENST00000458128 KIF13AQ9H1H9 1805 aa18.07■□□□□ 0.48
PGAM4-201ENST00000458128 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
PGAM4-201ENST00000458128 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.46
PGAM4-201ENST00000458128 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
PGAM4-201ENST00000458128 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
PGAM4-201ENST00000458128 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
PGAM4-201ENST00000458128 CEP170Q5SW79 1584 aa17.93■□□□□ 0.46
PGAM4-201ENST00000458128 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
PGAM4-201ENST00000458128 BIVM-ERCC5R4GMW8 1640 aa17.89■□□□□ 0.45
PGAM4-201ENST00000458128 FAM69CQ0P6D2 419 aa17.87■□□□□ 0.45
PGAM4-201ENST00000458128 TSPOAP1O95153 1857 aa17.82■□□□□ 0.44
PGAM4-201ENST00000458128 NUP160Q12769 1436 aa17.81■□□□□ 0.44
PGAM4-201ENST00000458128 TOP2BQ02880 1626 aa17.81■□□□□ 0.44
PGAM4-201ENST00000458128 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
PGAM4-201ENST00000458128 KDM6BO15054 1643 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms