RNA–Protein interactions for RNA: ENST00000457327.2

TREML3P-201, Transcript of triggering receptor expressed on myeloid cells like 3, pseudogene, humanhuman

BASIC

Gene TREML3P, Length 501 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREML3P-201ENST00000457327 NISCHQ9Y2I1 1504 aa18.02■□□□□ 0.47
TREML3P-201ENST00000457327 ABCC9O60706 1549 aa16.77■□□□□ 0.28
TREML3P-201ENST00000457327 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
TREML3P-201ENST00000457327 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
TREML3P-201ENST00000457327 RB1CC1Q8TDY2 1594 aa15.74■□□□□ 0.11
TREML3P-201ENST00000457327 DCAF8L2P0C7V8 631 aa15.66■□□□□ 0.1
TREML3P-201ENST00000457327 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
TREML3P-201ENST00000457327 NACADO15069 1562 aa15.53■□□□□ 0.08
TREML3P-201ENST00000457327 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
TREML3P-201ENST00000457327 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
TREML3P-201ENST00000457327 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
TREML3P-201ENST00000457327 MYO15BQ96JP2 1530 aa15.13■□□□□ 0.01
TREML3P-201ENST00000457327 DNAJC5Q9H3Z4 198 aa15.11■□□□□ 0.01
TREML3P-201ENST00000457327 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
TREML3P-201ENST00000457327 SHROOM4Q9ULL8 1493 aa14.96□□□□□ -0.01
TREML3P-201ENST00000457327 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
TREML3P-201ENST00000457327 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
TREML3P-201ENST00000457327 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
TREML3P-201ENST00000457327 ZCCHC6Q5VYS8 1495 aaKnown RBP14.79□□□□□ -0.04
TREML3P-201ENST00000457327 CUX2O14529 1486 aa14.56□□□□□ -0.08
TREML3P-201ENST00000457327 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
TREML3P-201ENST00000457327 NCAPD3P42695 1498 aa14.37□□□□□ -0.11
TREML3P-201ENST00000457327 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
TREML3P-201ENST00000457327 NESP48681 1621 aa14.27□□□□□ -0.12
TREML3P-201ENST00000457327 ATAD2BQ9ULI0 1458 aa14.25□□□□□ -0.13
TREML3P-201ENST00000457327 SMARCA2P51531 1590 aa14.19□□□□□ -0.14
TREML3P-201ENST00000457327 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
TREML3P-201ENST00000457327 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
TREML3P-201ENST00000457327 SMARCA4P51532 1647 aa14.11□□□□□ -0.15
TREML3P-201ENST00000457327 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
TREML3P-201ENST00000457327 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
TREML3P-201ENST00000457327 LAMC3Q9Y6N6 1575 aa14.07□□□□□ -0.16
TREML3P-201ENST00000457327 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
TREML3P-201ENST00000457327 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
TREML3P-201ENST00000457327 OSCARQ8IYS5 282 aa14□□□□□ -0.17
TREML3P-201ENST00000457327 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.18
TREML3P-201ENST00000457327 PEG3Q9GZU2 1588 aa13.93□□□□□ -0.18
TREML3P-201ENST00000457327 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
TREML3P-201ENST00000457327 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
TREML3P-201ENST00000457327 WDR62O43379 1518 aa13.85□□□□□ -0.19
TREML3P-201ENST00000457327 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
TREML3P-201ENST00000457327 FANCD2Q9BXW9 1451 aa13.76□□□□□ -0.21
TREML3P-201ENST00000457327 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
TREML3P-201ENST00000457327 CYB5RLQ6IPT4 315 aa13.71□□□□□ -0.21
TREML3P-201ENST00000457327 WIZO95785 1651 aa13.7□□□□□ -0.22
TREML3P-201ENST00000457327 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
TREML3P-201ENST00000457327 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
TREML3P-201ENST00000457327 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
TREML3P-201ENST00000457327 CFTRP13569 1480 aa13.66□□□□□ -0.22
TREML3P-201ENST00000457327 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
TREML3P-201ENST00000457327 AEBP2Q6ZN18 517 aaPredicted RBP13.63□□□□□ -0.23
TREML3P-201ENST00000457327 ARHGEF11O15085 1522 aa13.6□□□□□ -0.23
TREML3P-201ENST00000457327 FBLN2P98095 1184 aa13.57□□□□□ -0.24
TREML3P-201ENST00000457327 ZNF608Q9ULD9 1512 aaPredicted RBP13.56□□□□□ -0.24
TREML3P-201ENST00000457327 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
TREML3P-201ENST00000457327 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
TREML3P-201ENST00000457327 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
TREML3P-201ENST00000457327 AQRO60306 1485 aaKnown RBP eCLIP13.45□□□□□ -0.26
TREML3P-201ENST00000457327 TOPBP1Q92547 1522 aa13.44□□□□□ -0.26
TREML3P-201ENST00000457327 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
TREML3P-201ENST00000457327 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
TREML3P-201ENST00000457327 PRDM2Q13029 1718 aa13.4□□□□□ -0.26
TREML3P-201ENST00000457327 EIF4G3O43432 1585 aaKnown RBP13.4□□□□□ -0.26
TREML3P-201ENST00000457327 CHD1O14646 1710 aa13.39□□□□□ -0.27
TREML3P-201ENST00000457327 CCDC88BA6NC98 1476 aa13.39□□□□□ -0.27
TREML3P-201ENST00000457327 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
TREML3P-201ENST00000457327 DNMBPQ6XZF7 1577 aa13.33□□□□□ -0.28
TREML3P-201ENST00000457327 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
TREML3P-201ENST00000457327 TARBP1Q13395 1621 aaKnown RBP13.31□□□□□ -0.28
TREML3P-201ENST00000457327 SOGA1O94964 1423 aa13.3□□□□□ -0.28
TREML3P-201ENST00000457327 RAD54L2Q9Y4B4 1467 aa13.28□□□□□ -0.28
TREML3P-201ENST00000457327 POLA1P09884 1462 aaPredicted RBP13.27□□□□□ -0.29
TREML3P-201ENST00000457327 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
TREML3P-201ENST00000457327 SYNJ1O43426 1573 aa13.23□□□□□ -0.29
TREML3P-201ENST00000457327 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
TREML3P-201ENST00000457327 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
TREML3P-201ENST00000457327 MAGI1Q96QZ7 1491 aaPredicted RBP13.17□□□□□ -0.3
TREML3P-201ENST00000457327 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
TREML3P-201ENST00000457327 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
TREML3P-201ENST00000457327 FGD5Q6ZNL6 1462 aa13.15□□□□□ -0.3
TREML3P-201ENST00000457327 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
TREML3P-201ENST00000457327 CUX1P39880 1505 aa13.05□□□□□ -0.32
TREML3P-201ENST00000457327 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
TREML3P-201ENST00000457327 ERCC6L2Q5T890 1561 aa13.02□□□□□ -0.33
TREML3P-201ENST00000457327 PBRM1Q86U86 1689 aa13.02□□□□□ -0.33
TREML3P-201ENST00000457327 FAM69CQ0P6D2 419 aa13.01□□□□□ -0.33
TREML3P-201ENST00000457327 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
TREML3P-201ENST00000457327 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
TREML3P-201ENST00000457327 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
TREML3P-201ENST00000457327 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
TREML3P-201ENST00000457327 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
TREML3P-201ENST00000457327 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
TREML3P-201ENST00000457327 KIF13AQ9H1H9 1805 aa12.93□□□□□ -0.34
TREML3P-201ENST00000457327 ABCA5Q8WWZ7 1642 aa12.92□□□□□ -0.34
TREML3P-201ENST00000457327 NUP160Q12769 1436 aa12.92□□□□□ -0.34
TREML3P-201ENST00000457327 PRG4Q92954 1404 aaPredicted RBP12.92□□□□□ -0.34
TREML3P-201ENST00000457327 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
TREML3P-201ENST00000457327 FHAD1B1AJZ9 1412 aa12.89□□□□□ -0.35
TREML3P-201ENST00000457327 ABCC10Q5T3U5 1492 aa12.87□□□□□ -0.35
TREML3P-201ENST00000457327 SHROOM2Q13796 1616 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms