RNA–Protein interactions for RNA: ENST00000457232.5

HNF4A-206, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-206ENST00000457232 NISCHQ9Y2I1 1504 aa32.13■■■□□ 2.73
HNF4A-206ENST00000457232 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
HNF4A-206ENST00000457232 ABCC9O60706 1549 aa28.68■■■□□ 2.18
HNF4A-206ENST00000457232 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
HNF4A-206ENST00000457232 NACADO15069 1562 aa27.2■■□□□ 1.95
HNF4A-206ENST00000457232 UNC13AQ9UPW8 1703 aa26.89■■□□□ 1.9
HNF4A-206ENST00000457232 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.89
HNF4A-206ENST00000457232 MYO15BQ96JP2 1530 aa26.87■■□□□ 1.89
HNF4A-206ENST00000457232 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
HNF4A-206ENST00000457232 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
HNF4A-206ENST00000457232 PABPN1Q86U42 306 aaKnown RBP eCLIP26.65■■□□□ 1.86
HNF4A-206ENST00000457232 BICRAQ9NZM4 1560 aa26.64■■□□□ 1.86
HNF4A-206ENST00000457232 DCAF1Q9Y4B6 1507 aa26.57■■□□□ 1.84
HNF4A-206ENST00000457232 SCRIBQ14160 1630 aa26.26■■□□□ 1.79
HNF4A-206ENST00000457232 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
HNF4A-206ENST00000457232 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
HNF4A-206ENST00000457232 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
HNF4A-206ENST00000457232 CECR2Q9BXF3 1484 aa25.82■■□□□ 1.72
HNF4A-206ENST00000457232 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
HNF4A-206ENST00000457232 SMARCA4P51532 1647 aa25.08■■□□□ 1.61
HNF4A-206ENST00000457232 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
HNF4A-206ENST00000457232 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
HNF4A-206ENST00000457232 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
HNF4A-206ENST00000457232 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
HNF4A-206ENST00000457232 PEG3Q9GZU2 1588 aa24.85■■□□□ 1.57
HNF4A-206ENST00000457232 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
HNF4A-206ENST00000457232 MROH2BQ7Z745 1585 aa24.77■■□□□ 1.56
HNF4A-206ENST00000457232 ERCC6Q03468 1493 aa24.7■■□□□ 1.55
HNF4A-206ENST00000457232 NESP48681 1621 aa24.7■■□□□ 1.54
HNF4A-206ENST00000457232 CUX2O14529 1486 aa24.69■■□□□ 1.54
HNF4A-206ENST00000457232 LAMC3Q9Y6N6 1575 aa24.55■■□□□ 1.52
HNF4A-206ENST00000457232 DNAJC5Q9H3Z4 198 aa24.52■■□□□ 1.52
HNF4A-206ENST00000457232 WIZO95785 1651 aa24.5■■□□□ 1.51
HNF4A-206ENST00000457232 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
HNF4A-206ENST00000457232 KIF21AQ7Z4S6 1674 aa24.45■■□□□ 1.5
HNF4A-206ENST00000457232 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
HNF4A-206ENST00000457232 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
HNF4A-206ENST00000457232 RSF1Q96T23 1441 aaPredicted RBP24.25■■□□□ 1.47
HNF4A-206ENST00000457232 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
HNF4A-206ENST00000457232 MRC2Q9UBG0 1479 aa24.16■■□□□ 1.46
HNF4A-206ENST00000457232 WDR62O43379 1518 aa24.14■■□□□ 1.46
HNF4A-206ENST00000457232 CFTRP13569 1480 aa24.08■■□□□ 1.45
HNF4A-206ENST00000457232 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
HNF4A-206ENST00000457232 FANCD2Q9BXW9 1451 aa24.05■■□□□ 1.44
HNF4A-206ENST00000457232 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
HNF4A-206ENST00000457232 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.41
HNF4A-206ENST00000457232 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
HNF4A-206ENST00000457232 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
HNF4A-206ENST00000457232 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
HNF4A-206ENST00000457232 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
HNF4A-206ENST00000457232 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
HNF4A-206ENST00000457232 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
HNF4A-206ENST00000457232 EIF4G3O43432 1585 aaKnown RBP23.49■■□□□ 1.35
HNF4A-206ENST00000457232 OSCARQ8IYS5 282 aa23.47■■□□□ 1.35
HNF4A-206ENST00000457232 TARBP1Q13395 1621 aaKnown RBP23.47■■□□□ 1.35
HNF4A-206ENST00000457232 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
HNF4A-206ENST00000457232 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.33
HNF4A-206ENST00000457232 CHD1O14646 1710 aa23.32■■□□□ 1.32
HNF4A-206ENST00000457232 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.322e-7■■■■□ 26.1
HNF4A-206ENST00000457232 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
HNF4A-206ENST00000457232 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
HNF4A-206ENST00000457232 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
HNF4A-206ENST00000457232 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
HNF4A-206ENST00000457232 CUX1P39880 1505 aa23.27■■□□□ 1.32
HNF4A-206ENST00000457232 FGD5Q6ZNL6 1462 aa23.25■■□□□ 1.31
HNF4A-206ENST00000457232 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
HNF4A-206ENST00000457232 SOGA1O94964 1423 aa23.21■■□□□ 1.31
HNF4A-206ENST00000457232 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
HNF4A-206ENST00000457232 TDRD9Q8NDG6 1382 aaKnown RBP23.16■■□□□ 1.3
HNF4A-206ENST00000457232 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
HNF4A-206ENST00000457232 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
HNF4A-206ENST00000457232 PBRM1Q86U86 1689 aa23.07■■□□□ 1.28
HNF4A-206ENST00000457232 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
HNF4A-206ENST00000457232 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
HNF4A-206ENST00000457232 FBLN2P98095 1184 aa23.04■■□□□ 1.28
HNF4A-206ENST00000457232 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
HNF4A-206ENST00000457232 ABCA5Q8WWZ7 1642 aa23.02■■□□□ 1.28
HNF4A-206ENST00000457232 ARAP1Q96P48 1450 aa23.01■■□□□ 1.27
HNF4A-206ENST00000457232 ABCA10Q8WWZ4 1543 aa22.99■■□□□ 1.27
HNF4A-206ENST00000457232 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
HNF4A-206ENST00000457232 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
HNF4A-206ENST00000457232 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
HNF4A-206ENST00000457232 SYNJ1O43426 1573 aa22.96■■□□□ 1.27
HNF4A-206ENST00000457232 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
HNF4A-206ENST00000457232 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
HNF4A-206ENST00000457232 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
HNF4A-206ENST00000457232 WRNQ14191 1432 aaPredicted RBP eCLIP22.85■■□□□ 1.25
HNF4A-206ENST00000457232 ADAMTS12P58397 1594 aa22.82■■□□□ 1.24
HNF4A-206ENST00000457232 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
HNF4A-206ENST00000457232 CEP170Q5SW79 1584 aa22.73■■□□□ 1.23
HNF4A-206ENST00000457232 ERICH3Q5RHP9 1530 aa22.7■■□□□ 1.22
HNF4A-206ENST00000457232 NUP160Q12769 1436 aa22.7■■□□□ 1.22
HNF4A-206ENST00000457232 ERCC6L2Q5T890 1561 aa22.68■■□□□ 1.22
HNF4A-206ENST00000457232 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
HNF4A-206ENST00000457232 SHROOM2Q13796 1616 aa22.65■■□□□ 1.22
HNF4A-206ENST00000457232 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
HNF4A-206ENST00000457232 RUSC2Q8N2Y8 1516 aa22.52■■□□□ 1.2
HNF4A-206ENST00000457232 CUL7Q14999 1698 aa22.42■■□□□ 1.18
HNF4A-206ENST00000457232 PRG4Q92954 1404 aaPredicted RBP22.41■■□□□ 1.18
HNF4A-206ENST00000457232 KIF27Q86VH2 1401 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms