RNA–Protein interactions for RNA: ENST00000457080.5

MITF-211, Transcript of melanogenesis associated transcription factor, humanhuman

TSL 1 (best)

Gene MITF, Length 382 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MITF-211ENST00000457080 NISCHQ9Y2I1 1504 aa29.26■■■□□ 2.27
MITF-211ENST00000457080 CCDC180Q9P1Z9 1646 aa26.25■■□□□ 1.79
MITF-211ENST00000457080 ABCC9O60706 1549 aa26■■□□□ 1.75
MITF-211ENST00000457080 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
MITF-211ENST00000457080 NACADO15069 1562 aa24.76■■□□□ 1.55
MITF-211ENST00000457080 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
MITF-211ENST00000457080 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
MITF-211ENST00000457080 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
MITF-211ENST00000457080 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
MITF-211ENST00000457080 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
MITF-211ENST00000457080 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
MITF-211ENST00000457080 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
MITF-211ENST00000457080 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
MITF-211ENST00000457080 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
MITF-211ENST00000457080 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
MITF-211ENST00000457080 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
MITF-211ENST00000457080 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
MITF-211ENST00000457080 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
MITF-211ENST00000457080 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
MITF-211ENST00000457080 SMARCA4P51532 1647 aa22.81■■□□□ 1.24
MITF-211ENST00000457080 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
MITF-211ENST00000457080 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
MITF-211ENST00000457080 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
MITF-211ENST00000457080 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
MITF-211ENST00000457080 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
MITF-211ENST00000457080 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
MITF-211ENST00000457080 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
MITF-211ENST00000457080 ERCC6Q03468 1493 aa22.5■■□□□ 1.19
MITF-211ENST00000457080 CUX2O14529 1486 aa22.41■■□□□ 1.18
MITF-211ENST00000457080 NESP48681 1621 aa22.36■■□□□ 1.17
MITF-211ENST00000457080 LAMC3Q9Y6N6 1575 aa22.33■■□□□ 1.16
MITF-211ENST00000457080 WIZO95785 1651 aa22.26■■□□□ 1.15
MITF-211ENST00000457080 PDS5BQ9NTI5 1447 aa22.18■■□□□ 1.14
MITF-211ENST00000457080 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
MITF-211ENST00000457080 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
MITF-211ENST00000457080 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
MITF-211ENST00000457080 DNAJC5Q9H3Z4 198 aa22.12■■□□□ 1.13
MITF-211ENST00000457080 RSF1Q96T23 1441 aaPredicted RBP22.12■■□□□ 1.13
MITF-211ENST00000457080 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
MITF-211ENST00000457080 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
MITF-211ENST00000457080 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
MITF-211ENST00000457080 CFTRP13569 1480 aa21.92■■□□□ 1.1
MITF-211ENST00000457080 WDR62O43379 1518 aa21.9■■□□□ 1.1
MITF-211ENST00000457080 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
MITF-211ENST00000457080 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
MITF-211ENST00000457080 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
MITF-211ENST00000457080 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
MITF-211ENST00000457080 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
MITF-211ENST00000457080 TOPBP1Q92547 1522 aa21.49■■□□□ 1.03
MITF-211ENST00000457080 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
MITF-211ENST00000457080 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
MITF-211ENST00000457080 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
MITF-211ENST00000457080 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
MITF-211ENST00000457080 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
MITF-211ENST00000457080 POLA1P09884 1462 aaPredicted RBP21.28■■□□□ 1
MITF-211ENST00000457080 TARBP1Q13395 1621 aaKnown RBP21.28■■□□□ 1
MITF-211ENST00000457080 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
MITF-211ENST00000457080 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
MITF-211ENST00000457080 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.98
MITF-211ENST00000457080 SOGA1O94964 1423 aa21.18■□□□□ 0.98
MITF-211ENST00000457080 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
MITF-211ENST00000457080 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
MITF-211ENST00000457080 CUX1P39880 1505 aa21.16■□□□□ 0.98
MITF-211ENST00000457080 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
MITF-211ENST00000457080 CHD1O14646 1710 aa21.11■□□□□ 0.97
MITF-211ENST00000457080 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
MITF-211ENST00000457080 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
MITF-211ENST00000457080 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
MITF-211ENST00000457080 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
MITF-211ENST00000457080 FBLN2P98095 1184 aa21.04■□□□□ 0.96
MITF-211ENST00000457080 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
MITF-211ENST00000457080 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
MITF-211ENST00000457080 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
MITF-211ENST00000457080 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
MITF-211ENST00000457080 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
MITF-211ENST00000457080 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
MITF-211ENST00000457080 PBRM1Q86U86 1689 aa20.94■□□□□ 0.94
MITF-211ENST00000457080 CHMP7Q8WUX9 453 aaPredicted RBP20.94■□□□□ 0.94
MITF-211ENST00000457080 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
MITF-211ENST00000457080 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
MITF-211ENST00000457080 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
MITF-211ENST00000457080 TOP2BQ02880 1626 aa20.91■□□□□ 0.94
MITF-211ENST00000457080 ABCA5Q8WWZ7 1642 aa20.91■□□□□ 0.94
MITF-211ENST00000457080 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
MITF-211ENST00000457080 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
MITF-211ENST00000457080 ARAP1Q96P48 1450 aa20.82■□□□□ 0.92
MITF-211ENST00000457080 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
MITF-211ENST00000457080 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
MITF-211ENST00000457080 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
MITF-211ENST00000457080 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
MITF-211ENST00000457080 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
MITF-211ENST00000457080 NUP160Q12769 1436 aa20.64■□□□□ 0.89
MITF-211ENST00000457080 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
MITF-211ENST00000457080 TRHP20396 242 aaPredicted RBP20.58■□□□□ 0.89
MITF-211ENST00000457080 SHROOM2Q13796 1616 aa20.55■□□□□ 0.88
MITF-211ENST00000457080 KIF27Q86VH2 1401 aa20.52■□□□□ 0.87
MITF-211ENST00000457080 ERCC6L2Q5T890 1561 aa20.5■□□□□ 0.87
MITF-211ENST00000457080 CUL7Q14999 1698 aa20.48■□□□□ 0.87
MITF-211ENST00000457080 RUSC2Q8N2Y8 1516 aa20.46■□□□□ 0.87
MITF-211ENST00000457080 PRG4Q92954 1404 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms