RNA–Protein interactions for RNA: ENST00000456818.5

TUBA4A-207, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-207ENST00000456818 NISCHQ9Y2I1 1504 aa41.53■■■■■ 4.24
TUBA4A-207ENST00000456818 CCDC180Q9P1Z9 1646 aa36.82■■■■□ 3.49
TUBA4A-207ENST00000456818 ABCC9O60706 1549 aa36.13■■■■□ 3.38
TUBA4A-207ENST00000456818 DCAF8L2P0C7V8 631 aa34.86■■■■□ 3.17
TUBA4A-207ENST00000456818 RB1CC1Q8TDY2 1594 aa34.71■■■■□ 3.15
TUBA4A-207ENST00000456818 NACADO15069 1562 aa34.68■■■■□ 3.14
TUBA4A-207ENST00000456818 ZCCHC6Q5VYS8 1495 aaKnown RBP34.58■■■■□ 3.13
TUBA4A-207ENST00000456818 MYO15BQ96JP2 1530 aa34.45■■■■□ 3.1
TUBA4A-207ENST00000456818 DCAF1Q9Y4B6 1507 aa34.32■■■■□ 3.08
TUBA4A-207ENST00000456818 PABPN1Q86U42 306 aaKnown RBP eCLIP33.83■■■■□ 3.01
TUBA4A-207ENST00000456818 UNC13AQ9UPW8 1703 aa33.81■■■■□ 3
TUBA4A-207ENST00000456818 SCRIBQ14160 1630 aa33.69■■■□□ 2.98
TUBA4A-207ENST00000456818 BICRAQ9NZM4 1560 aa33.62■■■□□ 2.97
TUBA4A-207ENST00000456818 SHROOM4Q9ULL8 1493 aa33.28■■■□□ 2.92
TUBA4A-207ENST00000456818 DNAJC5BQ9UF47 199 aa33.14■■■□□ 2.9
TUBA4A-207ENST00000456818 EIF4G1Q04637 1599 aaKnown RBP32.77■■■□□ 2.84
TUBA4A-207ENST00000456818 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
TUBA4A-207ENST00000456818 CECR2Q9BXF3 1484 aa32.46■■■□□ 2.79
TUBA4A-207ENST00000456818 BAZ1AQ9NRL2 1556 aaPredicted RBP32.19■■■□□ 2.74
TUBA4A-207ENST00000456818 SMARCA4P51532 1647 aa32.18■■■□□ 2.74
TUBA4A-207ENST00000456818 ATAD2BQ9ULI0 1458 aa32.05■■■□□ 2.72
TUBA4A-207ENST00000456818 NCAPD3P42695 1498 aa32.02■■■□□ 2.72
TUBA4A-207ENST00000456818 MROH2BQ7Z745 1585 aa32.01■■■□□ 2.71
TUBA4A-207ENST00000456818 SMARCA2P51531 1590 aa32■■■□□ 2.71
TUBA4A-207ENST00000456818 PEG3Q9GZU2 1588 aa31.85■■■□□ 2.69
TUBA4A-207ENST00000456818 HMGXB3Q12766 1538 aa31.83■■■□□ 2.69
TUBA4A-207ENST00000456818 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
TUBA4A-207ENST00000456818 RSF1Q96T23 1441 aaPredicted RBP31.67■■■□□ 2.66
TUBA4A-207ENST00000456818 WIZO95785 1651 aa31.64■■■□□ 2.66
TUBA4A-207ENST00000456818 TOP2AP11388 1531 aaKnown RBP31.33■■■□□ 2.61
TUBA4A-207ENST00000456818 NESP48681 1621 aa31.25■■■□□ 2.59
TUBA4A-207ENST00000456818 ERCC6Q03468 1493 aa31.17■■■□□ 2.58
TUBA4A-207ENST00000456818 LAMC3Q9Y6N6 1575 aa31.14■■■□□ 2.58
TUBA4A-207ENST00000456818 CADPSQ9ULU8 1353 aa31.13■■■□□ 2.57
TUBA4A-207ENST00000456818 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
TUBA4A-207ENST00000456818 PDS5BQ9NTI5 1447 aa31■■■□□ 2.55
TUBA4A-207ENST00000456818 CCDC88BA6NC98 1476 aa30.99■■■□□ 2.55
TUBA4A-207ENST00000456818 CFTRP13569 1480 aa30.91■■■□□ 2.54
TUBA4A-207ENST00000456818 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
TUBA4A-207ENST00000456818 CUX2O14529 1486 aa30.76■■■□□ 2.52
TUBA4A-207ENST00000456818 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.51
TUBA4A-207ENST00000456818 CEP164Q9UPV0 1460 aa30.72■■■□□ 2.51
TUBA4A-207ENST00000456818 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
TUBA4A-207ENST00000456818 MRC2Q9UBG0 1479 aa30.66■■■□□ 2.5
TUBA4A-207ENST00000456818 PRDM2Q13029 1718 aa30.55■■■□□ 2.48
TUBA4A-207ENST00000456818 WDR62O43379 1518 aa30.52■■■□□ 2.48
TUBA4A-207ENST00000456818 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
TUBA4A-207ENST00000456818 ABCC8Q09428 1581 aa30.26■■■□□ 2.43
TUBA4A-207ENST00000456818 TOPBP1Q92547 1522 aa30.25■■■□□ 2.43
TUBA4A-207ENST00000456818 DNMBPQ6XZF7 1577 aa30.2■■■□□ 2.42
TUBA4A-207ENST00000456818 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
TUBA4A-207ENST00000456818 CUX1P39880 1505 aa30.02■■■□□ 2.4
TUBA4A-207ENST00000456818 POLA1P09884 1462 aaPredicted RBP30■■■□□ 2.39
TUBA4A-207ENST00000456818 FGD5Q6ZNL6 1462 aa29.94■■■□□ 2.38
TUBA4A-207ENST00000456818 SOGA1O94964 1423 aa29.93■■■□□ 2.38
TUBA4A-207ENST00000456818 ZNF608Q9ULD9 1512 aaPredicted RBP29.92■■■□□ 2.38
TUBA4A-207ENST00000456818 RAD54L2Q9Y4B4 1467 aa29.9■■■□□ 2.38
TUBA4A-207ENST00000456818 WRNQ14191 1432 aaPredicted RBP eCLIP29.89■■■□□ 2.38
TUBA4A-207ENST00000456818 TARBP1Q13395 1621 aaKnown RBP29.86■■■□□ 2.37
TUBA4A-207ENST00000456818 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
TUBA4A-207ENST00000456818 AQRO60306 1485 aaKnown RBP eCLIP29.79■■■□□ 2.36
TUBA4A-207ENST00000456818 EIF4G3O43432 1585 aaKnown RBP29.77■■■□□ 2.36
TUBA4A-207ENST00000456818 SYNJ1O43426 1573 aa29.76■■■□□ 2.35
TUBA4A-207ENST00000456818 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
TUBA4A-207ENST00000456818 TOP2BQ02880 1626 aa29.75■■■□□ 2.35
TUBA4A-207ENST00000456818 BIVM-ERCC5R4GMW8 1640 aa29.72■■■□□ 2.35
TUBA4A-207ENST00000456818 ABCA10Q8WWZ4 1543 aa29.64■■■□□ 2.34
TUBA4A-207ENST00000456818 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
TUBA4A-207ENST00000456818 OSCARQ8IYS5 282 aa29.58■■■□□ 2.33
TUBA4A-207ENST00000456818 GAPVD1Q14C86 1478 aa29.55■■■□□ 2.32
TUBA4A-207ENST00000456818 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
TUBA4A-207ENST00000456818 FBLN2P98095 1184 aa29.52■■■□□ 2.32
TUBA4A-207ENST00000456818 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
TUBA4A-207ENST00000456818 ABCA5Q8WWZ7 1642 aa29.47■■■□□ 2.31
TUBA4A-207ENST00000456818 MAGI1Q96QZ7 1491 aaPredicted RBP29.44■■■□□ 2.3
TUBA4A-207ENST00000456818 CHMP7Q8WUX9 453 aaPredicted RBP29.42■■■□□ 2.3
TUBA4A-207ENST00000456818 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
TUBA4A-207ENST00000456818 CHD1O14646 1710 aa29.34■■■□□ 2.29
TUBA4A-207ENST00000456818 SYNJ2O15056 1496 aa29.34■■■□□ 2.29
TUBA4A-207ENST00000456818 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
TUBA4A-207ENST00000456818 KIF27Q86VH2 1401 aa29.28■■■□□ 2.28
TUBA4A-207ENST00000456818 ERICH3Q5RHP9 1530 aa29.27■■■□□ 2.28
TUBA4A-207ENST00000456818 FHAD1B1AJZ9 1412 aa29.22■■■□□ 2.27
TUBA4A-207ENST00000456818 ADAMTS12P58397 1594 aa29.21■■■□□ 2.27
TUBA4A-207ENST00000456818 GRIN2AQ12879 1464 aa29.15■■■□□ 2.26
TUBA4A-207ENST00000456818 IGF1RP08069 1367 aa29.14■■■□□ 2.26
TUBA4A-207ENST00000456818 CLASP1Q7Z460 1538 aa29.06■■■□□ 2.24
TUBA4A-207ENST00000456818 ARHGEF11O15085 1522 aa29.03■■■□□ 2.24
TUBA4A-207ENST00000456818 NUP160Q12769 1436 aa29.01■■■□□ 2.23
TUBA4A-207ENST00000456818 CARMIL1Q5VZK9 1371 aa29■■■□□ 2.23
TUBA4A-207ENST00000456818 RUSC2Q8N2Y8 1516 aa28.99■■■□□ 2.23
TUBA4A-207ENST00000456818 CUL7Q14999 1698 aa28.99■■■□□ 2.23
TUBA4A-207ENST00000456818 RIMBP3CA6NJZ7 1639 aa28.99■■■□□ 2.23
TUBA4A-207ENST00000456818 RIMBP3BA6NNM3 1639 aa28.99■■■□□ 2.23
TUBA4A-207ENST00000456818 RIMBP3Q9UFD9 1639 aa28.99■■■□□ 2.23
TUBA4A-207ENST00000456818 CEP170Q5SW79 1584 aa28.98■■■□□ 2.23
TUBA4A-207ENST00000456818 CHIC1Q5VXU3 224 aa28.91■■■□□ 2.22
TUBA4A-207ENST00000456818 CYB5RLQ6IPT4 315 aa28.85■■■□□ 2.21
TUBA4A-207ENST00000456818 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
TUBA4A-207ENST00000456818 RAPGEF2Q9Y4G8 1499 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms