RNA–Protein interactions for RNA: ENST00000456627.1

LINC00355-201, long intergenic non-protein coding RNA 355, humanhuman

TSL 2 BASIC

Gene LINC00355, Length 1,878 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00355-201ENST00000456627 NISCHQ9Y2I1 1504 aa29.19■■■□□ 2.26
LINC00355-201ENST00000456627 CCDC180Q9P1Z9 1646 aa25.47■■□□□ 1.67
LINC00355-201ENST00000456627 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
LINC00355-201ENST00000456627 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
LINC00355-201ENST00000456627 ABCC9O60706 1549 aa24.35■■□□□ 1.49
LINC00355-201ENST00000456627 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
LINC00355-201ENST00000456627 SHROOM4Q9ULL8 1493 aa23.89■■□□□ 1.42
LINC00355-201ENST00000456627 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
LINC00355-201ENST00000456627 NACADO15069 1562 aa23.78■■□□□ 1.4
LINC00355-201ENST00000456627 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
LINC00355-201ENST00000456627 SCRIBQ14160 1630 aa23.52■■□□□ 1.36
LINC00355-201ENST00000456627 UNC13AQ9UPW8 1703 aa23.12■■□□□ 1.29
LINC00355-201ENST00000456627 PABPN1Q86U42 306 aaKnown RBP eCLIP22.98■■□□□ 1.27
LINC00355-201ENST00000456627 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
LINC00355-201ENST00000456627 BICRAQ9NZM4 1560 aa22.89■■□□□ 1.26
LINC00355-201ENST00000456627 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
LINC00355-201ENST00000456627 RSF1Q96T23 1441 aaPredicted RBP22.62■■□□□ 1.21
LINC00355-201ENST00000456627 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.21
LINC00355-201ENST00000456627 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
LINC00355-201ENST00000456627 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
LINC00355-201ENST00000456627 WIZO95785 1651 aa22.39■■□□□ 1.18
LINC00355-201ENST00000456627 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
LINC00355-201ENST00000456627 ATAD2BQ9ULI0 1458 aa22.14■■□□□ 1.14
LINC00355-201ENST00000456627 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.13
LINC00355-201ENST00000456627 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
LINC00355-201ENST00000456627 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
LINC00355-201ENST00000456627 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
LINC00355-201ENST00000456627 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
LINC00355-201ENST00000456627 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
LINC00355-201ENST00000456627 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
LINC00355-201ENST00000456627 HMGXB3Q12766 1538 aa21.89■■□□□ 1.1
LINC00355-201ENST00000456627 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
LINC00355-201ENST00000456627 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
LINC00355-201ENST00000456627 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
LINC00355-201ENST00000456627 ABCC8Q09428 1581 aa21.46■■□□□ 1.03
LINC00355-201ENST00000456627 CFTRP13569 1480 aa21.44■■□□□ 1.02
LINC00355-201ENST00000456627 CADPSQ9ULU8 1353 aa21.42■■□□□ 1.02
LINC00355-201ENST00000456627 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
LINC00355-201ENST00000456627 NESP48681 1621 aa21.31■■□□□ 1
LINC00355-201ENST00000456627 PRDM2Q13029 1718 aa21.27■■□□□ 1
LINC00355-201ENST00000456627 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
LINC00355-201ENST00000456627 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
LINC00355-201ENST00000456627 FAM9AQ8IZU1 332 aaPredicted RBP21.2■□□□□ 0.98
LINC00355-201ENST00000456627 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
LINC00355-201ENST00000456627 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
LINC00355-201ENST00000456627 CUX1P39880 1505 aa21.12■□□□□ 0.97
LINC00355-201ENST00000456627 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
LINC00355-201ENST00000456627 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
LINC00355-201ENST00000456627 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
LINC00355-201ENST00000456627 SOGA1O94964 1423 aa21.03■□□□□ 0.96
LINC00355-201ENST00000456627 LOC105371045A0A1W2PR82 267 aa21.02■□□□□ 0.96
LINC00355-201ENST00000456627 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
LINC00355-201ENST00000456627 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
LINC00355-201ENST00000456627 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
LINC00355-201ENST00000456627 RUSC2Q8N2Y8 1516 aa20.95■□□□□ 0.94
LINC00355-201ENST00000456627 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
LINC00355-201ENST00000456627 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
LINC00355-201ENST00000456627 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
LINC00355-201ENST00000456627 ERCC6Q03468 1493 aa20.91■□□□□ 0.94
LINC00355-201ENST00000456627 EEA1Q15075 1411 aa20.9■□□□□ 0.94
LINC00355-201ENST00000456627 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
LINC00355-201ENST00000456627 MRC2Q9UBG0 1479 aa20.84■□□□□ 0.93
LINC00355-201ENST00000456627 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
LINC00355-201ENST00000456627 CUX2O14529 1486 aa20.8■□□□□ 0.92
LINC00355-201ENST00000456627 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
LINC00355-201ENST00000456627 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
LINC00355-201ENST00000456627 WDR62O43379 1518 aa20.71■□□□□ 0.91
LINC00355-201ENST00000456627 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
LINC00355-201ENST00000456627 UBTFP17480 764 aaKnown RBP20.67■□□□□ 0.9
LINC00355-201ENST00000456627 THOC2Q8NI27 1593 aaKnown RBP20.66■□□□□ 0.9
LINC00355-201ENST00000456627 GOLGA3Q08378 1498 aa20.65■□□□□ 0.9
LINC00355-201ENST00000456627 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
LINC00355-201ENST00000456627 KIF21BO75037 1637 aa20.63■□□□□ 0.89
LINC00355-201ENST00000456627 IGF1RP08069 1367 aa20.61■□□□□ 0.89
LINC00355-201ENST00000456627 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
LINC00355-201ENST00000456627 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
LINC00355-201ENST00000456627 RAPGEF2Q9Y4G8 1499 aa20.6■□□□□ 0.89
LINC00355-201ENST00000456627 PRXQ9BXM0 1461 aa20.57■□□□□ 0.88
LINC00355-201ENST00000456627 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
LINC00355-201ENST00000456627 GAPVD1Q14C86 1478 aa20.55■□□□□ 0.88
LINC00355-201ENST00000456627 TNIKQ9UKE5 1360 aa20.54■□□□□ 0.88
LINC00355-201ENST00000456627 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
LINC00355-201ENST00000456627 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
LINC00355-201ENST00000456627 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
LINC00355-201ENST00000456627 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
LINC00355-201ENST00000456627 ZNF608Q9ULD9 1512 aaPredicted RBP20.5■□□□□ 0.87
LINC00355-201ENST00000456627 RANGAP1P46060 587 aaPredicted RBP20.46■□□□□ 0.87
LINC00355-201ENST00000456627 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
LINC00355-201ENST00000456627 CUL7Q14999 1698 aa20.43■□□□□ 0.86
LINC00355-201ENST00000456627 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
LINC00355-201ENST00000456627 GRIN2BQ13224 1484 aa20.4■□□□□ 0.86
LINC00355-201ENST00000456627 EIF4G3O43432 1585 aaKnown RBP20.39■□□□□ 0.85
LINC00355-201ENST00000456627 CLIP1P30622 1438 aa20.34■□□□□ 0.85
LINC00355-201ENST00000456627 FHAD1B1AJZ9 1412 aa20.31■□□□□ 0.84
LINC00355-201ENST00000456627 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
LINC00355-201ENST00000456627 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
LINC00355-201ENST00000456627 FBLN2P98095 1184 aa20.23■□□□□ 0.83
LINC00355-201ENST00000456627 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
LINC00355-201ENST00000456627 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
LINC00355-201ENST00000456627 CTTNBP2Q8WZ74 1663 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 239.7 ms