RNA–Protein interactions for RNA: ENST00000456528.5

NPRL3-204, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 5

Gene NPRL3, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-204ENST00000456528 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
NPRL3-204ENST00000456528 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
NPRL3-204ENST00000456528 ABCC9O60706 1549 aa31.11■■■□□ 2.57
NPRL3-204ENST00000456528 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
NPRL3-204ENST00000456528 NACADO15069 1562 aa29.73■■■□□ 2.35
NPRL3-204ENST00000456528 DCAF8L2P0C7V8 631 aa29.5■■■□□ 2.31
NPRL3-204ENST00000456528 MYO15BQ96JP2 1530 aa29.42■■■□□ 2.3
NPRL3-204ENST00000456528 ZCCHC6Q5VYS8 1495 aaKnown RBP29.39■■■□□ 2.3
NPRL3-204ENST00000456528 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
NPRL3-204ENST00000456528 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.27
NPRL3-204ENST00000456528 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
NPRL3-204ENST00000456528 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
NPRL3-204ENST00000456528 SCRIBQ14160 1630 aa28.85■■■□□ 2.21
NPRL3-204ENST00000456528 DNAJC5BQ9UF47 199 aa28.66■■■□□ 2.18
NPRL3-204ENST00000456528 SHROOM4Q9ULL8 1493 aa28.62■■■□□ 2.17
NPRL3-204ENST00000456528 EIF4G1Q04637 1599 aaKnown RBP28.22■■■□□ 2.11
NPRL3-204ENST00000456528 CC2D2AQ9P2K1 1620 aa28.19■■■□□ 2.1
NPRL3-204ENST00000456528 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
NPRL3-204ENST00000456528 SMARCA4P51532 1647 aa27.55■■■□□ 2
NPRL3-204ENST00000456528 BAZ1AQ9NRL2 1556 aaPredicted RBP27.43■■□□□ 1.98
NPRL3-204ENST00000456528 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
NPRL3-204ENST00000456528 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
NPRL3-204ENST00000456528 NCAPD3P42695 1498 aa27.35■■□□□ 1.97
NPRL3-204ENST00000456528 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
NPRL3-204ENST00000456528 PEG3Q9GZU2 1588 aa27.23■■□□□ 1.95
NPRL3-204ENST00000456528 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
NPRL3-204ENST00000456528 BAZ1BQ9UIG0 1483 aaKnown RBP27.17■■□□□ 1.94
NPRL3-204ENST00000456528 WIZO95785 1651 aa26.99■■□□□ 1.91
NPRL3-204ENST00000456528 ERCC6Q03468 1493 aa26.87■■□□□ 1.89
NPRL3-204ENST00000456528 NESP48681 1621 aa26.85■■□□□ 1.89
NPRL3-204ENST00000456528 LAMC3Q9Y6N6 1575 aa26.78■■□□□ 1.88
NPRL3-204ENST00000456528 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
NPRL3-204ENST00000456528 KIF21AQ7Z4S6 1674 aa26.68■■□□□ 1.86
NPRL3-204ENST00000456528 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
NPRL3-204ENST00000456528 CUX2O14529 1486 aa26.66■■□□□ 1.86
NPRL3-204ENST00000456528 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
NPRL3-204ENST00000456528 CADPSQ9ULU8 1353 aa26.53■■□□□ 1.84
NPRL3-204ENST00000456528 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
NPRL3-204ENST00000456528 PRDM2Q13029 1718 aa26.42■■□□□ 1.82
NPRL3-204ENST00000456528 CFTRP13569 1480 aa26.35■■□□□ 1.81
NPRL3-204ENST00000456528 MRC2Q9UBG0 1479 aa26.33■■□□□ 1.81
NPRL3-204ENST00000456528 CEP164Q9UPV0 1460 aa26.32■■□□□ 1.8
NPRL3-204ENST00000456528 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
NPRL3-204ENST00000456528 WDR62O43379 1518 aa26.28■■□□□ 1.8
NPRL3-204ENST00000456528 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
NPRL3-204ENST00000456528 URB2Q14146 1524 aaKnown RBP26.07■■□□□ 1.76
NPRL3-204ENST00000456528 DNAJC5Q9H3Z4 198 aa26.03■■□□□ 1.76
NPRL3-204ENST00000456528 TOPBP1Q92547 1522 aa25.86■■□□□ 1.73
NPRL3-204ENST00000456528 DNMBPQ6XZF7 1577 aa25.85■■□□□ 1.73
NPRL3-204ENST00000456528 SUPT5HO00267 1087 aaKnown RBP25.83■■□□□ 1.73
NPRL3-204ENST00000456528 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
NPRL3-204ENST00000456528 IFT140Q96RY7 1462 aa25.74■■□□□ 1.71
NPRL3-204ENST00000456528 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
NPRL3-204ENST00000456528 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
NPRL3-204ENST00000456528 TARBP1Q13395 1621 aaKnown RBP25.65■■□□□ 1.7
NPRL3-204ENST00000456528 POLA1P09884 1462 aaPredicted RBP25.61■■□□□ 1.69
NPRL3-204ENST00000456528 CUX1P39880 1505 aa25.58■■□□□ 1.68
NPRL3-204ENST00000456528 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
NPRL3-204ENST00000456528 RAD54L2Q9Y4B4 1467 aa25.48■■□□□ 1.67
NPRL3-204ENST00000456528 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
NPRL3-204ENST00000456528 CHD1O14646 1710 aa25.46■■□□□ 1.67
NPRL3-204ENST00000456528 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.667e-9■■■■■ 34.8
NPRL3-204ENST00000456528 SOGA1O94964 1423 aa25.44■■□□□ 1.66
NPRL3-204ENST00000456528 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
NPRL3-204ENST00000456528 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
NPRL3-204ENST00000456528 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
NPRL3-204ENST00000456528 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
NPRL3-204ENST00000456528 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
NPRL3-204ENST00000456528 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
NPRL3-204ENST00000456528 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
NPRL3-204ENST00000456528 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
NPRL3-204ENST00000456528 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
NPRL3-204ENST00000456528 ABCA10Q8WWZ4 1543 aa25.24■■□□□ 1.63
NPRL3-204ENST00000456528 GRIN2BQ13224 1484 aa25.22■■□□□ 1.63
NPRL3-204ENST00000456528 MAGI1Q96QZ7 1491 aaPredicted RBP25.21■■□□□ 1.63
NPRL3-204ENST00000456528 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
NPRL3-204ENST00000456528 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
NPRL3-204ENST00000456528 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
NPRL3-204ENST00000456528 GAPVD1Q14C86 1478 aa25.19■■□□□ 1.62
NPRL3-204ENST00000456528 FBLN2P98095 1184 aa25.16■■□□□ 1.62
NPRL3-204ENST00000456528 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
NPRL3-204ENST00000456528 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
NPRL3-204ENST00000456528 SYNJ2O15056 1496 aa25.1■■□□□ 1.61
NPRL3-204ENST00000456528 CLASP1Q7Z460 1538 aa25.05■■□□□ 1.6
NPRL3-204ENST00000456528 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
NPRL3-204ENST00000456528 CHMP7Q8WUX9 453 aaPredicted RBP25.03■■□□□ 1.6
NPRL3-204ENST00000456528 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
NPRL3-204ENST00000456528 GRIN2AQ12879 1464 aa24.92■■□□□ 1.58
NPRL3-204ENST00000456528 ARAP1Q96P48 1450 aa24.89■■□□□ 1.57
NPRL3-204ENST00000456528 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
NPRL3-204ENST00000456528 CEP170Q5SW79 1584 aa24.85■■□□□ 1.57
NPRL3-204ENST00000456528 NUP160Q12769 1436 aa24.79■■□□□ 1.56
NPRL3-204ENST00000456528 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
NPRL3-204ENST00000456528 CUL7Q14999 1698 aa24.77■■□□□ 1.56
NPRL3-204ENST00000456528 KIF27Q86VH2 1401 aa24.75■■□□□ 1.55
NPRL3-204ENST00000456528 SHROOM2Q13796 1616 aa24.73■■□□□ 1.55
NPRL3-204ENST00000456528 RUSC2Q8N2Y8 1516 aa24.69■■□□□ 1.54
NPRL3-204ENST00000456528 ERCC6L2Q5T890 1561 aa24.67■■□□□ 1.54
NPRL3-204ENST00000456528 IGF1RP08069 1367 aa24.61■■□□□ 1.53
NPRL3-204ENST00000456528 PRG4Q92954 1404 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms