RNA–Protein interactions for RNA: ENST00000456469.1

AC239859.3-201, humanhuman

TSL 5 BASIC

Gene AC239859.3, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239859.3-201ENST00000456469 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.01
AC239859.3-201ENST00000456469 ABCC9O60706 1549 aa19.53■□□□□ 0.72
AC239859.3-201ENST00000456469 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
AC239859.3-201ENST00000456469 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
AC239859.3-201ENST00000456469 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
AC239859.3-201ENST00000456469 NACADO15069 1562 aa18.34■□□□□ 0.53
AC239859.3-201ENST00000456469 UNC13AQ9UPW8 1703 aa18.27■□□□□ 0.52
AC239859.3-201ENST00000456469 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
AC239859.3-201ENST00000456469 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
AC239859.3-201ENST00000456469 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
AC239859.3-201ENST00000456469 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
AC239859.3-201ENST00000456469 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
AC239859.3-201ENST00000456469 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
AC239859.3-201ENST00000456469 CC2D2AQ9P2K1 1620 aa17.71■□□□□ 0.43
AC239859.3-201ENST00000456469 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
AC239859.3-201ENST00000456469 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
AC239859.3-201ENST00000456469 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
AC239859.3-201ENST00000456469 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
AC239859.3-201ENST00000456469 DNAJC5Q9H3Z4 198 aa17.15■□□□□ 0.34
AC239859.3-201ENST00000456469 CUX2O14529 1486 aa16.99■□□□□ 0.31
AC239859.3-201ENST00000456469 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
AC239859.3-201ENST00000456469 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
AC239859.3-201ENST00000456469 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
AC239859.3-201ENST00000456469 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
AC239859.3-201ENST00000456469 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
AC239859.3-201ENST00000456469 SMARCA2P51531 1590 aa16.77■□□□□ 0.28
AC239859.3-201ENST00000456469 THOC2Q8NI27 1593 aaKnown RBP16.73■□□□□ 0.27
AC239859.3-201ENST00000456469 NESP48681 1621 aa16.73■□□□□ 0.27
AC239859.3-201ENST00000456469 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
AC239859.3-201ENST00000456469 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
AC239859.3-201ENST00000456469 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
AC239859.3-201ENST00000456469 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
AC239859.3-201ENST00000456469 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
AC239859.3-201ENST00000456469 MROH2BQ7Z745 1585 aa16.48■□□□□ 0.23
AC239859.3-201ENST00000456469 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
AC239859.3-201ENST00000456469 WDR62O43379 1518 aa16.4■□□□□ 0.22
AC239859.3-201ENST00000456469 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
AC239859.3-201ENST00000456469 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
AC239859.3-201ENST00000456469 WIZO95785 1651 aa16.31■□□□□ 0.2
AC239859.3-201ENST00000456469 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
AC239859.3-201ENST00000456469 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
AC239859.3-201ENST00000456469 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
AC239859.3-201ENST00000456469 PRDM2Q13029 1718 aa16.15■□□□□ 0.18
AC239859.3-201ENST00000456469 CFTRP13569 1480 aa16.13■□□□□ 0.17
AC239859.3-201ENST00000456469 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
AC239859.3-201ENST00000456469 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
AC239859.3-201ENST00000456469 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
AC239859.3-201ENST00000456469 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
AC239859.3-201ENST00000456469 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
AC239859.3-201ENST00000456469 OSCARQ8IYS5 282 aa16■□□□□ 0.15
AC239859.3-201ENST00000456469 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
AC239859.3-201ENST00000456469 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
AC239859.3-201ENST00000456469 ARHGEF11O15085 1522 aa15.92■□□□□ 0.14
AC239859.3-201ENST00000456469 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
AC239859.3-201ENST00000456469 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
AC239859.3-201ENST00000456469 CHD1O14646 1710 aa15.88■□□□□ 0.13
AC239859.3-201ENST00000456469 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
AC239859.3-201ENST00000456469 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.12
AC239859.3-201ENST00000456469 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
AC239859.3-201ENST00000456469 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
AC239859.3-201ENST00000456469 ABCC8Q09428 1581 aa15.77■□□□□ 0.11
AC239859.3-201ENST00000456469 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
AC239859.3-201ENST00000456469 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.1
AC239859.3-201ENST00000456469 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
AC239859.3-201ENST00000456469 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
AC239859.3-201ENST00000456469 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
AC239859.3-201ENST00000456469 CYB5RLQ6IPT4 315 aa15.63■□□□□ 0.09
AC239859.3-201ENST00000456469 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
AC239859.3-201ENST00000456469 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
AC239859.3-201ENST00000456469 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
AC239859.3-201ENST00000456469 PBRM1Q86U86 1689 aa15.55■□□□□ 0.08
AC239859.3-201ENST00000456469 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
AC239859.3-201ENST00000456469 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
AC239859.3-201ENST00000456469 SOGA1O94964 1423 aa15.52■□□□□ 0.08
AC239859.3-201ENST00000456469 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
AC239859.3-201ENST00000456469 TDRD9Q8NDG6 1382 aaKnown RBP15.51■□□□□ 0.07
AC239859.3-201ENST00000456469 FBLN2P98095 1184 aa15.51■□□□□ 0.07
AC239859.3-201ENST00000456469 CUX1P39880 1505 aa15.51■□□□□ 0.07
AC239859.3-201ENST00000456469 SYNJ2O15056 1496 aa15.47■□□□□ 0.07
AC239859.3-201ENST00000456469 GRIN2BQ13224 1484 aa15.47■□□□□ 0.07
AC239859.3-201ENST00000456469 SUPT5HO00267 1087 aaKnown RBP15.46■□□□□ 0.07
AC239859.3-201ENST00000456469 ABCA5Q8WWZ7 1642 aa15.45■□□□□ 0.06
AC239859.3-201ENST00000456469 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
AC239859.3-201ENST00000456469 CHMP7Q8WUX9 453 aaPredicted RBP15.39■□□□□ 0.05
AC239859.3-201ENST00000456469 ABCA10Q8WWZ4 1543 aa15.36■□□□□ 0.05
AC239859.3-201ENST00000456469 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
AC239859.3-201ENST00000456469 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
AC239859.3-201ENST00000456469 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
AC239859.3-201ENST00000456469 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
AC239859.3-201ENST00000456469 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
AC239859.3-201ENST00000456469 KIF13AQ9H1H9 1805 aa15.29■□□□□ 0.04
AC239859.3-201ENST00000456469 NUP160Q12769 1436 aa15.27■□□□□ 0.04
AC239859.3-201ENST00000456469 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
AC239859.3-201ENST00000456469 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
AC239859.3-201ENST00000456469 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
AC239859.3-201ENST00000456469 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
AC239859.3-201ENST00000456469 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
AC239859.3-201ENST00000456469 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
AC239859.3-201ENST00000456469 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
AC239859.3-201ENST00000456469 DIP2BQ9P265 1576 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 279.8 ms