RNA–Protein interactions for RNA: ENST00000456419.5

BBX-217, Transcript of BBX, HMG-box containing, humanhuman

TSL 5

Gene BBX, Length 871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-217ENST00000456419 NISCHQ9Y2I1 1504 aa23.53■■□□□ 1.36
BBX-217ENST00000456419 ABCC9O60706 1549 aa21.67■■□□□ 1.06
BBX-217ENST00000456419 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
BBX-217ENST00000456419 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
BBX-217ENST00000456419 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
BBX-217ENST00000456419 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
BBX-217ENST00000456419 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
BBX-217ENST00000456419 NACADO15069 1562 aa20.2■□□□□ 0.82
BBX-217ENST00000456419 PABPN1Q86U42 306 aaKnown RBP eCLIP20.16■□□□□ 0.82
BBX-217ENST00000456419 DCAF8L2P0C7V8 631 aa20.03■□□□□ 0.8
BBX-217ENST00000456419 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
BBX-217ENST00000456419 MYO15BQ96JP2 1530 aa19.83■□□□□ 0.77
BBX-217ENST00000456419 UNC13AQ9UPW8 1703 aa19.83■□□□□ 0.77
BBX-217ENST00000456419 CECR2Q9BXF3 1484 aa19.58■□□□□ 0.72
BBX-217ENST00000456419 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
BBX-217ENST00000456419 CC2D2AQ9P2K1 1620 aa19.51■□□□□ 0.71
BBX-217ENST00000456419 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
BBX-217ENST00000456419 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
BBX-217ENST00000456419 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
BBX-217ENST00000456419 DNAJC5Q9H3Z4 198 aa19.38■□□□□ 0.69
BBX-217ENST00000456419 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
BBX-217ENST00000456419 CUX2O14529 1486 aa18.85■□□□□ 0.61
BBX-217ENST00000456419 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
BBX-217ENST00000456419 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
BBX-217ENST00000456419 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.57
BBX-217ENST00000456419 NESP48681 1621 aa18.51■□□□□ 0.55
BBX-217ENST00000456419 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
BBX-217ENST00000456419 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
BBX-217ENST00000456419 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
BBX-217ENST00000456419 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
BBX-217ENST00000456419 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.53
BBX-217ENST00000456419 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
BBX-217ENST00000456419 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
BBX-217ENST00000456419 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
BBX-217ENST00000456419 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
BBX-217ENST00000456419 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
BBX-217ENST00000456419 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
BBX-217ENST00000456419 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
BBX-217ENST00000456419 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
BBX-217ENST00000456419 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
BBX-217ENST00000456419 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
BBX-217ENST00000456419 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
BBX-217ENST00000456419 WDR62O43379 1518 aa18.04■□□□□ 0.48
BBX-217ENST00000456419 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
BBX-217ENST00000456419 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
BBX-217ENST00000456419 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
BBX-217ENST00000456419 CFTRP13569 1480 aa17.82■□□□□ 0.44
BBX-217ENST00000456419 WIZO95785 1651 aa17.81■□□□□ 0.44
BBX-217ENST00000456419 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.43
BBX-217ENST00000456419 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
BBX-217ENST00000456419 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
BBX-217ENST00000456419 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
BBX-217ENST00000456419 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.42
BBX-217ENST00000456419 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
BBX-217ENST00000456419 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
BBX-217ENST00000456419 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
BBX-217ENST00000456419 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
BBX-217ENST00000456419 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
BBX-217ENST00000456419 TOPBP1Q92547 1522 aa17.49■□□□□ 0.39
BBX-217ENST00000456419 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
BBX-217ENST00000456419 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
BBX-217ENST00000456419 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
BBX-217ENST00000456419 EIF4G3O43432 1585 aaKnown RBP17.42■□□□□ 0.38
BBX-217ENST00000456419 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
BBX-217ENST00000456419 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
BBX-217ENST00000456419 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
BBX-217ENST00000456419 FBLN2P98095 1184 aa17.37■□□□□ 0.37
BBX-217ENST00000456419 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
BBX-217ENST00000456419 TARBP1Q13395 1621 aaKnown RBP17.34■□□□□ 0.37
BBX-217ENST00000456419 CHD1O14646 1710 aa17.31■□□□□ 0.36
BBX-217ENST00000456419 POLA1P09884 1462 aaPredicted RBP17.3■□□□□ 0.36
BBX-217ENST00000456419 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.35
BBX-217ENST00000456419 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
BBX-217ENST00000456419 SOGA1O94964 1423 aa17.23■□□□□ 0.35
BBX-217ENST00000456419 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
BBX-217ENST00000456419 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
BBX-217ENST00000456419 CHMP7Q8WUX9 453 aaPredicted RBP17.19■□□□□ 0.34
BBX-217ENST00000456419 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
BBX-217ENST00000456419 SYNJ1O43426 1573 aa17.12■□□□□ 0.33
BBX-217ENST00000456419 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
BBX-217ENST00000456419 WDR97A6NE52 1622 aa17.11■□□□□ 0.33
BBX-217ENST00000456419 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
BBX-217ENST00000456419 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
BBX-217ENST00000456419 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
BBX-217ENST00000456419 CUX1P39880 1505 aa17.05■□□□□ 0.32
BBX-217ENST00000456419 FOXD1Q16676 465 aa16.99■□□□□ 0.31
BBX-217ENST00000456419 ERCC6L2Q5T890 1561 aa16.92■□□□□ 0.3
BBX-217ENST00000456419 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
BBX-217ENST00000456419 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
BBX-217ENST00000456419 ABCA5Q8WWZ7 1642 aa16.87■□□□□ 0.29
BBX-217ENST00000456419 PBRM1Q86U86 1689 aa16.87■□□□□ 0.29
BBX-217ENST00000456419 NUP160Q12769 1436 aa16.87■□□□□ 0.29
BBX-217ENST00000456419 CEP170Q5SW79 1584 aa16.84■□□□□ 0.29
BBX-217ENST00000456419 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
BBX-217ENST00000456419 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
BBX-217ENST00000456419 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
BBX-217ENST00000456419 ADAMTS12P58397 1594 aa16.77■□□□□ 0.28
BBX-217ENST00000456419 PRG4Q92954 1404 aaPredicted RBP16.73■□□□□ 0.27
BBX-217ENST00000456419 JPH4Q96JJ6 628 aa16.72■□□□□ 0.27
BBX-217ENST00000456419 FAM69CQ0P6D2 419 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms