RNA–Protein interactions for RNA: ENST00000456008.2

SLIT1-205, Transcript of slit guidance ligand 1, humanhuman

TSL 3

Gene SLIT1, Length 948 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT1-205ENST00000456008 NISCHQ9Y2I1 1504 aa51.78■■■■■ 5.88
SLIT1-205ENST00000456008 CCDC180Q9P1Z9 1646 aa45.92■■■■■ 4.94
SLIT1-205ENST00000456008 ABCC9O60706 1549 aa44.7■■■■■ 4.75
SLIT1-205ENST00000456008 ZCCHC6Q5VYS8 1495 aaKnown RBP43.19■■■■■ 4.5
SLIT1-205ENST00000456008 DCAF8L2P0C7V8 631 aa43.17■■■■■ 4.5
SLIT1-205ENST00000456008 NACADO15069 1562 aa43.14■■■■■ 4.5
SLIT1-205ENST00000456008 RB1CC1Q8TDY2 1594 aa43.12■■■■■ 4.49
SLIT1-205ENST00000456008 MYO15BQ96JP2 1530 aa42.97■■■■■ 4.47
SLIT1-205ENST00000456008 DCAF1Q9Y4B6 1507 aa42.87■■■■■ 4.45
SLIT1-205ENST00000456008 UNC13AQ9UPW8 1703 aa42.09■■■■■ 4.33
SLIT1-205ENST00000456008 SCRIBQ14160 1630 aa41.91■■■■■ 4.3
SLIT1-205ENST00000456008 PABPN1Q86U42 306 aaKnown RBP eCLIP41.82■■■■■ 4.29
SLIT1-205ENST00000456008 BICRAQ9NZM4 1560 aa41.79■■■■■ 4.28
SLIT1-205ENST00000456008 SHROOM4Q9ULL8 1493 aa41.42■■■■■ 4.22
SLIT1-205ENST00000456008 DNAJC5BQ9UF47 199 aa40.8■■■■■ 4.12
SLIT1-205ENST00000456008 EIF4G1Q04637 1599 aaKnown RBP40.68■■■■■ 4.1
SLIT1-205ENST00000456008 CC2D2AQ9P2K1 1620 aa40.45■■■■■ 4.07
SLIT1-205ENST00000456008 CECR2Q9BXF3 1484 aa40.3■■■■■ 4.04
SLIT1-205ENST00000456008 BAZ1AQ9NRL2 1556 aaPredicted RBP40.13■■■■■ 4.01
SLIT1-205ENST00000456008 SMARCA4P51532 1647 aa40.12■■■■■ 4.01
SLIT1-205ENST00000456008 MROH2BQ7Z745 1585 aa39.89■■■■□ 3.98
SLIT1-205ENST00000456008 ATAD2BQ9ULI0 1458 aa39.85■■■■□ 3.97
SLIT1-205ENST00000456008 SMARCA2P51531 1590 aa39.83■■■■□ 3.97
SLIT1-205ENST00000456008 NCAPD3P42695 1498 aa39.81■■■■□ 3.96
SLIT1-205ENST00000456008 PEG3Q9GZU2 1588 aa39.73■■■■□ 3.95
SLIT1-205ENST00000456008 HMGXB3Q12766 1538 aa39.63■■■■□ 3.93
SLIT1-205ENST00000456008 BAZ1BQ9UIG0 1483 aaKnown RBP39.55■■■■□ 3.92
SLIT1-205ENST00000456008 RSF1Q96T23 1441 aaPredicted RBP39.54■■■■□ 3.92
SLIT1-205ENST00000456008 WIZO95785 1651 aa39.46■■■■□ 3.91
SLIT1-205ENST00000456008 TOP2AP11388 1531 aaKnown RBP39.09■■■■□ 3.85
SLIT1-205ENST00000456008 NESP48681 1621 aa38.74■■■■□ 3.79
SLIT1-205ENST00000456008 LAMC3Q9Y6N6 1575 aa38.71■■■■□ 3.79
SLIT1-205ENST00000456008 SUPT5HO00267 1087 aaKnown RBP38.71■■■■□ 3.79
SLIT1-205ENST00000456008 CADPSQ9ULU8 1353 aa38.67■■■■□ 3.78
SLIT1-205ENST00000456008 CCDC88BA6NC98 1476 aa38.62■■■■□ 3.77
SLIT1-205ENST00000456008 ERCC6Q03468 1493 aa38.54■■■■□ 3.76
SLIT1-205ENST00000456008 CFTRP13569 1480 aa38.47■■■■□ 3.75
SLIT1-205ENST00000456008 PDS5BQ9NTI5 1447 aa38.46■■■■□ 3.75
SLIT1-205ENST00000456008 KIF21AQ7Z4S6 1674 aa38.27■■■■□ 3.72
SLIT1-205ENST00000456008 FANCD2Q9BXW9 1451 aa38.21■■■■□ 3.71
SLIT1-205ENST00000456008 PRDM2Q13029 1718 aa38.15■■■■□ 3.7
SLIT1-205ENST00000456008 CEP164Q9UPV0 1460 aa38.15■■■■□ 3.7
SLIT1-205ENST00000456008 THOC2Q8NI27 1593 aaKnown RBP38.11■■■■□ 3.69
SLIT1-205ENST00000456008 CUX2O14529 1486 aa38.05■■■■□ 3.68
SLIT1-205ENST00000456008 MRC2Q9UBG0 1479 aa38.04■■■■□ 3.68
SLIT1-205ENST00000456008 WDR62O43379 1518 aa37.9■■■■□ 3.66
SLIT1-205ENST00000456008 URB2Q14146 1524 aaKnown RBP37.8■■■■□ 3.64
SLIT1-205ENST00000456008 ABCC8Q09428 1581 aa37.67■■■■□ 3.62
SLIT1-205ENST00000456008 TOPBP1Q92547 1522 aa37.61■■■■□ 3.61
SLIT1-205ENST00000456008 DNMBPQ6XZF7 1577 aa37.6■■■■□ 3.61
SLIT1-205ENST00000456008 CUX1P39880 1505 aa37.41■■■■□ 3.58
SLIT1-205ENST00000456008 IFT140Q96RY7 1462 aa37.35■■■■□ 3.57
SLIT1-205ENST00000456008 POLA1P09884 1462 aaPredicted RBP37.32■■■■□ 3.56
SLIT1-205ENST00000456008 WRNQ14191 1432 aaPredicted RBP eCLIP37.28■■■■□ 3.56
SLIT1-205ENST00000456008 FGD5Q6ZNL6 1462 aa37.26■■■■□ 3.56
SLIT1-205ENST00000456008 TARBP1Q13395 1621 aaKnown RBP37.18■■■■□ 3.54
SLIT1-205ENST00000456008 SOGA1O94964 1423 aa37.18■■■■□ 3.54
SLIT1-205ENST00000456008 TOP2BQ02880 1626 aa37.17■■■■□ 3.54
SLIT1-205ENST00000456008 BIVM-ERCC5R4GMW8 1640 aa37.15■■■■□ 3.54
SLIT1-205ENST00000456008 SYNJ1O43426 1573 aa37.15■■■■□ 3.54
SLIT1-205ENST00000456008 RAD54L2Q9Y4B4 1467 aa37.14■■■■□ 3.54
SLIT1-205ENST00000456008 ZNF608Q9ULD9 1512 aaPredicted RBP37.12■■■■□ 3.53
SLIT1-205ENST00000456008 EIF4G3O43432 1585 aaKnown RBP36.99■■■■□ 3.51
SLIT1-205ENST00000456008 AQRO60306 1485 aaKnown RBP eCLIP36.95■■■■□ 3.51
SLIT1-205ENST00000456008 TDRD9Q8NDG6 1382 aaKnown RBP36.93■■■■□ 3.5
SLIT1-205ENST00000456008 WDR97A6NE52 1622 aa36.93■■■■□ 3.5
SLIT1-205ENST00000456008 ABCA10Q8WWZ4 1543 aa36.92■■■■□ 3.5
SLIT1-205ENST00000456008 GAPVD1Q14C86 1478 aa36.75■■■■□ 3.47
SLIT1-205ENST00000456008 ABCA5Q8WWZ7 1642 aa36.74■■■■□ 3.47
SLIT1-205ENST00000456008 GRIN2BQ13224 1484 aa36.72■■■■□ 3.47
SLIT1-205ENST00000456008 SNAPC4Q5SXM2 1469 aa36.62■■■■□ 3.45
SLIT1-205ENST00000456008 PBRM1Q86U86 1689 aa36.62■■■■□ 3.45
SLIT1-205ENST00000456008 DNAJC5Q9H3Z4 198 aa36.6■■■■□ 3.45
SLIT1-205ENST00000456008 MAGI1Q96QZ7 1491 aaPredicted RBP36.6■■■■□ 3.45
SLIT1-205ENST00000456008 TRIM41Q8WV44 630 aa36.57■■■■□ 3.44
SLIT1-205ENST00000456008 OSCARQ8IYS5 282 aa36.53■■■■□ 3.44
SLIT1-205ENST00000456008 KIF27Q86VH2 1401 aa36.5■■■■□ 3.43
SLIT1-205ENST00000456008 ERICH3Q5RHP9 1530 aa36.49■■■■□ 3.43
SLIT1-205ENST00000456008 FBLN2P98095 1184 aa36.48■■■■□ 3.43
SLIT1-205ENST00000456008 CHD1O14646 1710 aa36.45■■■■□ 3.43
SLIT1-205ENST00000456008 SYNJ2O15056 1496 aa36.45■■■■□ 3.43
SLIT1-205ENST00000456008 CHMP7Q8WUX9 453 aaPredicted RBP36.43■■■■□ 3.42
SLIT1-205ENST00000456008 ADAMTS12P58397 1594 aa36.38■■■■□ 3.41
SLIT1-205ENST00000456008 FHAD1B1AJZ9 1412 aa36.34■■■■□ 3.41
SLIT1-205ENST00000456008 IGF1RP08069 1367 aa36.31■■■■□ 3.4
SLIT1-205ENST00000456008 CHIC1Q5VXU3 224 aa36.26■■■■□ 3.4
SLIT1-205ENST00000456008 GRIN2AQ12879 1464 aa36.24■■■■□ 3.39
SLIT1-205ENST00000456008 CUL7Q14999 1698 aa36.19■■■■□ 3.38
SLIT1-205ENST00000456008 RUSC2Q8N2Y8 1516 aa36.19■■■■□ 3.38
SLIT1-205ENST00000456008 CARMIL1Q5VZK9 1371 aa36.11■■■■□ 3.37
SLIT1-205ENST00000456008 CLASP1Q7Z460 1538 aa36.1■■■■□ 3.37
SLIT1-205ENST00000456008 NUP160Q12769 1436 aa36.08■■■■□ 3.37
SLIT1-205ENST00000456008 CEP170Q5SW79 1584 aa36.03■■■■□ 3.36
SLIT1-205ENST00000456008 EEA1Q15075 1411 aa35.97■■■■□ 3.35
SLIT1-205ENST00000456008 RAPGEF2Q9Y4G8 1499 aa35.92■■■■□ 3.34
SLIT1-205ENST00000456008 ARHGEF11O15085 1522 aa35.9■■■■□ 3.34
SLIT1-205ENST00000456008 CSRNP3Q8WYN3 585 aa35.88■■■■□ 3.33
SLIT1-205ENST00000456008 RIMBP3CA6NJZ7 1639 aa35.87■■■■□ 3.33
SLIT1-205ENST00000456008 RIMBP3BA6NNM3 1639 aa35.87■■■■□ 3.33
SLIT1-205ENST00000456008 RIMBP3Q9UFD9 1639 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms