RNA–Protein interactions for RNA: ENST00000455891.5

CMTR1-202, Transcript of cap methyltransferase 1, humanhuman

TSL 2

Gene CMTR1, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTR1-202ENST00000455891 NISCHQ9Y2I1 1504 aa50.47■■■■■ 5.67
CMTR1-202ENST00000455891 CCDC180Q9P1Z9 1646 aa44.85■■■■■ 4.77
CMTR1-202ENST00000455891 ABCC9O60706 1549 aa43.77■■■■■ 4.6
CMTR1-202ENST00000455891 RB1CC1Q8TDY2 1594 aa42.14■■■■■ 4.34
CMTR1-202ENST00000455891 DCAF8L2P0C7V8 631 aa42.12■■■■■ 4.33
CMTR1-202ENST00000455891 ZCCHC6Q5VYS8 1495 aaKnown RBP42.11■■■■■ 4.33
CMTR1-202ENST00000455891 NACADO15069 1562 aa42.1■■■■■ 4.33
CMTR1-202ENST00000455891 MYO15BQ96JP2 1530 aa41.85■■■■■ 4.29
CMTR1-202ENST00000455891 DCAF1Q9Y4B6 1507 aa41.74■■■■■ 4.27
CMTR1-202ENST00000455891 UNC13AQ9UPW8 1703 aa41.17■■■■■ 4.18
CMTR1-202ENST00000455891 SCRIBQ14160 1630 aa41■■■■■ 4.15
CMTR1-202ENST00000455891 PABPN1Q86U42 306 aaKnown RBP eCLIP40.88■■■■■ 4.13
CMTR1-202ENST00000455891 BICRAQ9NZM4 1560 aa40.83■■■■■ 4.13
CMTR1-202ENST00000455891 SHROOM4Q9ULL8 1493 aa40.43■■■■■ 4.06
CMTR1-202ENST00000455891 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
CMTR1-202ENST00000455891 EIF4G1Q04637 1599 aaKnown RBP39.77■■■■□ 3.96
CMTR1-202ENST00000455891 CC2D2AQ9P2K1 1620 aa39.58■■■■□ 3.93
CMTR1-202ENST00000455891 CECR2Q9BXF3 1484 aa39.31■■■■□ 3.88
CMTR1-202ENST00000455891 SMARCA4P51532 1647 aa39.18■■■■□ 3.86
CMTR1-202ENST00000455891 BAZ1AQ9NRL2 1556 aaPredicted RBP39.14■■■■□ 3.86
CMTR1-202ENST00000455891 MROH2BQ7Z745 1585 aa38.92■■■■□ 3.82
CMTR1-202ENST00000455891 ATAD2BQ9ULI0 1458 aa38.89■■■■□ 3.82
CMTR1-202ENST00000455891 SMARCA2P51531 1590 aa38.87■■■■□ 3.81
CMTR1-202ENST00000455891 NCAPD3P42695 1498 aa38.81■■■■□ 3.8
CMTR1-202ENST00000455891 PEG3Q9GZU2 1588 aa38.74■■■■□ 3.79
CMTR1-202ENST00000455891 HMGXB3Q12766 1538 aa38.69■■■■□ 3.78
CMTR1-202ENST00000455891 BAZ1BQ9UIG0 1483 aaKnown RBP38.63■■■■□ 3.77
CMTR1-202ENST00000455891 WIZO95785 1651 aa38.52■■■■□ 3.76
CMTR1-202ENST00000455891 RSF1Q96T23 1441 aaPredicted RBP38.5■■■■□ 3.75
CMTR1-202ENST00000455891 TOP2AP11388 1531 aaKnown RBP38.14■■■■□ 3.7
CMTR1-202ENST00000455891 NESP48681 1621 aa37.9■■■■□ 3.66
CMTR1-202ENST00000455891 LAMC3Q9Y6N6 1575 aa37.81■■■■□ 3.64
CMTR1-202ENST00000455891 ERCC6Q03468 1493 aa37.74■■■■□ 3.63
CMTR1-202ENST00000455891 CADPSQ9ULU8 1353 aa37.69■■■■□ 3.62
CMTR1-202ENST00000455891 SUPT5HO00267 1087 aaKnown RBP37.66■■■■□ 3.62
CMTR1-202ENST00000455891 CCDC88BA6NC98 1476 aa37.64■■■■□ 3.62
CMTR1-202ENST00000455891 PDS5BQ9NTI5 1447 aa37.53■■■■□ 3.6
CMTR1-202ENST00000455891 CFTRP13569 1480 aa37.52■■■■□ 3.6
CMTR1-202ENST00000455891 KIF21AQ7Z4S6 1674 aa37.47■■■■□ 3.59
CMTR1-202ENST00000455891 FANCD2Q9BXW9 1451 aa37.33■■■■□ 3.57
CMTR1-202ENST00000455891 THOC2Q8NI27 1593 aaKnown RBP37.32■■■■□ 3.56
CMTR1-202ENST00000455891 PRDM2Q13029 1718 aa37.29■■■■□ 3.56
CMTR1-202ENST00000455891 CEP164Q9UPV0 1460 aa37.28■■■■□ 3.56
CMTR1-202ENST00000455891 CUX2O14529 1486 aa37.23■■■■□ 3.55
CMTR1-202ENST00000455891 MRC2Q9UBG0 1479 aa37.2■■■■□ 3.54
CMTR1-202ENST00000455891 WDR62O43379 1518 aa37.05■■■■□ 3.52
CMTR1-202ENST00000455891 URB2Q14146 1524 aaKnown RBP36.94■■■■□ 3.5
CMTR1-202ENST00000455891 TOPBP1Q92547 1522 aa36.74■■■■□ 3.47
CMTR1-202ENST00000455891 DNMBPQ6XZF7 1577 aa36.72■■■■□ 3.47
CMTR1-202ENST00000455891 ABCC8Q09428 1581 aa36.7■■■■□ 3.46
CMTR1-202ENST00000455891 CUX1P39880 1505 aa36.52■■■■□ 3.44
CMTR1-202ENST00000455891 IFT140Q96RY7 1462 aa36.47■■■■□ 3.43
CMTR1-202ENST00000455891 POLA1P09884 1462 aaPredicted RBP36.43■■■■□ 3.42
CMTR1-202ENST00000455891 FGD5Q6ZNL6 1462 aa36.39■■■■□ 3.42
CMTR1-202ENST00000455891 WRNQ14191 1432 aaPredicted RBP eCLIP36.34■■■■□ 3.41
CMTR1-202ENST00000455891 TARBP1Q13395 1621 aaKnown RBP36.31■■■■□ 3.4
CMTR1-202ENST00000455891 ZNF608Q9ULD9 1512 aaPredicted RBP36.29■■■■□ 3.4
CMTR1-202ENST00000455891 RAD54L2Q9Y4B4 1467 aa36.27■■■■□ 3.4
CMTR1-202ENST00000455891 SYNJ1O43426 1573 aa36.27■■■■□ 3.4
CMTR1-202ENST00000455891 SOGA1O94964 1423 aa36.25■■■■□ 3.39
CMTR1-202ENST00000455891 TOP2BQ02880 1626 aa36.24■■■■□ 3.39
CMTR1-202ENST00000455891 BIVM-ERCC5R4GMW8 1640 aa36.24■■■■□ 3.39
CMTR1-202ENST00000455891 EIF4G3O43432 1585 aaKnown RBP36.21■■■■□ 3.39
CMTR1-202ENST00000455891 DNAJC5Q9H3Z4 198 aa36.1■■■■□ 3.37
CMTR1-202ENST00000455891 AQRO60306 1485 aaKnown RBP eCLIP36.09■■■■□ 3.379e-6■□□□□ 10.2
CMTR1-202ENST00000455891 WDR97A6NE52 1622 aa36.08■■■■□ 3.37
CMTR1-202ENST00000455891 TDRD9Q8NDG6 1382 aaKnown RBP36.04■■■■□ 3.36
CMTR1-202ENST00000455891 ABCA10Q8WWZ4 1543 aa36.01■■■■□ 3.36
CMTR1-202ENST00000455891 ABCA5Q8WWZ7 1642 aa35.89■■■■□ 3.34
CMTR1-202ENST00000455891 GAPVD1Q14C86 1478 aa35.86■■■■□ 3.33
CMTR1-202ENST00000455891 GRIN2BQ13224 1484 aa35.85■■■■□ 3.33
CMTR1-202ENST00000455891 PBRM1Q86U86 1689 aa35.82■■■■□ 3.33
CMTR1-202ENST00000455891 SNAPC4Q5SXM2 1469 aa35.81■■■■□ 3.32
CMTR1-202ENST00000455891 MAGI1Q96QZ7 1491 aaPredicted RBP35.73■■■■□ 3.31
CMTR1-202ENST00000455891 CHD1O14646 1710 aa35.71■■■■□ 3.31
CMTR1-202ENST00000455891 FBLN2P98095 1184 aa35.65■■■■□ 3.3
CMTR1-202ENST00000455891 OSCARQ8IYS5 282 aa35.65■■■■□ 3.3
CMTR1-202ENST00000455891 SYNJ2O15056 1496 aa35.6■■■■□ 3.29
CMTR1-202ENST00000455891 ERICH3Q5RHP9 1530 aa35.58■■■■□ 3.29
CMTR1-202ENST00000455891 ADAMTS12P58397 1594 aa35.56■■■■□ 3.28
CMTR1-202ENST00000455891 KIF27Q86VH2 1401 aa35.56■■■■□ 3.28
CMTR1-202ENST00000455891 CHMP7Q8WUX9 453 aaPredicted RBP35.54■■■■□ 3.28
CMTR1-202ENST00000455891 TRIM41Q8WV44 630 aa35.54■■■■□ 3.28
CMTR1-202ENST00000455891 FHAD1B1AJZ9 1412 aa35.45■■■■□ 3.27
CMTR1-202ENST00000455891 GRIN2AQ12879 1464 aa35.4■■■■□ 3.26
CMTR1-202ENST00000455891 IGF1RP08069 1367 aa35.33■■■■□ 3.25
CMTR1-202ENST00000455891 CUL7Q14999 1698 aa35.33■■■■□ 3.25
CMTR1-202ENST00000455891 CLASP1Q7Z460 1538 aa35.3■■■■□ 3.24
CMTR1-202ENST00000455891 RUSC2Q8N2Y8 1516 aa35.27■■■■□ 3.24
CMTR1-202ENST00000455891 CEP170Q5SW79 1584 aa35.23■■■■□ 3.23
CMTR1-202ENST00000455891 NUP160Q12769 1436 aa35.21■■■■□ 3.23
CMTR1-202ENST00000455891 CHIC1Q5VXU3 224 aa35.17■■■■□ 3.22
CMTR1-202ENST00000455891 CARMIL1Q5VZK9 1371 aa35.16■■■■□ 3.22
CMTR1-202ENST00000455891 ARHGEF11O15085 1522 aa35.16■■■■□ 3.22
CMTR1-202ENST00000455891 RIMBP3CA6NJZ7 1639 aa35.15■■■■□ 3.22
CMTR1-202ENST00000455891 RIMBP3BA6NNM3 1639 aa35.15■■■■□ 3.22
CMTR1-202ENST00000455891 RIMBP3Q9UFD9 1639 aa35.15■■■■□ 3.22
CMTR1-202ENST00000455891 RAPGEF2Q9Y4G8 1499 aa34.99■■■■□ 3.19
CMTR1-202ENST00000455891 EEA1Q15075 1411 aa34.96■■■■□ 3.19
CMTR1-202ENST00000455891 SHROOM2Q13796 1616 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms