RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 NISCHQ9Y2I1 1504 aa24.78■■□□□ 1.56
NIPSNAP1-204ENST00000455496 ABCC9O60706 1549 aa23.73■■□□□ 1.39
NIPSNAP1-204ENST00000455496 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
NIPSNAP1-204ENST00000455496 CCDC180Q9P1Z9 1646 aa22.61■■□□□ 1.21
NIPSNAP1-204ENST00000455496 DNAJC5Q9H3Z4 198 aa22.38■■□□□ 1.17
NIPSNAP1-204ENST00000455496 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
NIPSNAP1-204ENST00000455496 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
NIPSNAP1-204ENST00000455496 NACADO15069 1562 aa21.72■■□□□ 1.07
NIPSNAP1-204ENST00000455496 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
NIPSNAP1-204ENST00000455496 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.03
NIPSNAP1-204ENST00000455496 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
NIPSNAP1-204ENST00000455496 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
NIPSNAP1-204ENST00000455496 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1.01
NIPSNAP1-204ENST00000455496 SHROOM4Q9ULL8 1493 aa21.14■□□□□ 0.98
NIPSNAP1-204ENST00000455496 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.96
NIPSNAP1-204ENST00000455496 EIF4G1Q04637 1599 aaKnown RBP21.05■□□□□ 0.96
NIPSNAP1-204ENST00000455496 CUX2O14529 1486 aa20.93■□□□□ 0.94
NIPSNAP1-204ENST00000455496 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
NIPSNAP1-204ENST00000455496 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
NIPSNAP1-204ENST00000455496 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
NIPSNAP1-204ENST00000455496 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
NIPSNAP1-204ENST00000455496 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
NIPSNAP1-204ENST00000455496 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
NIPSNAP1-204ENST00000455496 NESP48681 1621 aa20.05■□□□□ 0.8
NIPSNAP1-204ENST00000455496 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
NIPSNAP1-204ENST00000455496 OSCARQ8IYS5 282 aa19.89■□□□□ 0.77
NIPSNAP1-204ENST00000455496 AEBP2Q6ZN18 517 aaPredicted RBP19.87■□□□□ 0.77
NIPSNAP1-204ENST00000455496 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
NIPSNAP1-204ENST00000455496 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
NIPSNAP1-204ENST00000455496 HMGXB3Q12766 1538 aa19.79■□□□□ 0.76
NIPSNAP1-204ENST00000455496 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.76
NIPSNAP1-204ENST00000455496 LAMC3Q9Y6N6 1575 aa19.76■□□□□ 0.75
NIPSNAP1-204ENST00000455496 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
NIPSNAP1-204ENST00000455496 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
NIPSNAP1-204ENST00000455496 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
NIPSNAP1-204ENST00000455496 BAZ1BQ9UIG0 1483 aaKnown RBP19.62■□□□□ 0.73
NIPSNAP1-204ENST00000455496 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
NIPSNAP1-204ENST00000455496 RIMBP3CA6NJZ7 1639 aa19.57■□□□□ 0.72
NIPSNAP1-204ENST00000455496 RIMBP3BA6NNM3 1639 aa19.57■□□□□ 0.72
NIPSNAP1-204ENST00000455496 RIMBP3Q9UFD9 1639 aa19.57■□□□□ 0.72
NIPSNAP1-204ENST00000455496 WDR62O43379 1518 aa19.55■□□□□ 0.72
NIPSNAP1-204ENST00000455496 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
NIPSNAP1-204ENST00000455496 CYB5RLQ6IPT4 315 aa19.48■□□□□ 0.71
NIPSNAP1-204ENST00000455496 CADPSQ9ULU8 1353 aa19.46■□□□□ 0.71
NIPSNAP1-204ENST00000455496 ILDR1Q86SU0 546 aaPredicted RBP19.45■□□□□ 0.7
NIPSNAP1-204ENST00000455496 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
NIPSNAP1-204ENST00000455496 PEG3Q9GZU2 1588 aa19.34■□□□□ 0.69
NIPSNAP1-204ENST00000455496 CEP164Q9UPV0 1460 aa19.32■□□□□ 0.68
NIPSNAP1-204ENST00000455496 FANCD2Q9BXW9 1451 aa19.21■□□□□ 0.67
NIPSNAP1-204ENST00000455496 ARAP1Q96P48 1450 aa19.17■□□□□ 0.66
NIPSNAP1-204ENST00000455496 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
NIPSNAP1-204ENST00000455496 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
NIPSNAP1-204ENST00000455496 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
NIPSNAP1-204ENST00000455496 ZNF608Q9ULD9 1512 aaPredicted RBP19.01■□□□□ 0.63
NIPSNAP1-204ENST00000455496 IFT140Q96RY7 1462 aa18.99■□□□□ 0.63
NIPSNAP1-204ENST00000455496 CFTRP13569 1480 aa18.98■□□□□ 0.63
NIPSNAP1-204ENST00000455496 FBLN2P98095 1184 aa18.93■□□□□ 0.62
NIPSNAP1-204ENST00000455496 CHD1O14646 1710 aa18.82■□□□□ 0.6
NIPSNAP1-204ENST00000455496 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
NIPSNAP1-204ENST00000455496 AQRO60306 1485 aaKnown RBP eCLIP18.75■□□□□ 0.591e-8■■■■■ 29.9
NIPSNAP1-204ENST00000455496 WIZO95785 1651 aa18.73■□□□□ 0.59
NIPSNAP1-204ENST00000455496 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
NIPSNAP1-204ENST00000455496 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
NIPSNAP1-204ENST00000455496 CLASP1Q7Z460 1538 aa18.64■□□□□ 0.58
NIPSNAP1-204ENST00000455496 CHMP7Q8WUX9 453 aaPredicted RBP18.63■□□□□ 0.57
NIPSNAP1-204ENST00000455496 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
NIPSNAP1-204ENST00000455496 KDM4FA0A1W2PPD8 638 aa18.59■□□□□ 0.57
NIPSNAP1-204ENST00000455496 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
NIPSNAP1-204ENST00000455496 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
NIPSNAP1-204ENST00000455496 PRDM2Q13029 1718 aa18.52■□□□□ 0.56
NIPSNAP1-204ENST00000455496 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
NIPSNAP1-204ENST00000455496 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
NIPSNAP1-204ENST00000455496 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
NIPSNAP1-204ENST00000455496 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
NIPSNAP1-204ENST00000455496 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
NIPSNAP1-204ENST00000455496 MAGI1Q96QZ7 1491 aaPredicted RBP18.43■□□□□ 0.54
NIPSNAP1-204ENST00000455496 SOGA1O94964 1423 aa18.4■□□□□ 0.54
NIPSNAP1-204ENST00000455496 SYNJ2O15056 1496 aa18.39■□□□□ 0.54
NIPSNAP1-204ENST00000455496 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.54
NIPSNAP1-204ENST00000455496 GRIN2BQ13224 1484 aa18.34■□□□□ 0.53
NIPSNAP1-204ENST00000455496 FAM69CQ0P6D2 419 aa18.34■□□□□ 0.53
NIPSNAP1-204ENST00000455496 FBXO41Q8TF61 875 aa18.34■□□□□ 0.53
NIPSNAP1-204ENST00000455496 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
NIPSNAP1-204ENST00000455496 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.53
NIPSNAP1-204ENST00000455496 KIF13AQ9H1H9 1805 aa18.33■□□□□ 0.53
NIPSNAP1-204ENST00000455496 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
NIPSNAP1-204ENST00000455496 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
NIPSNAP1-204ENST00000455496 SOCS7O14512 581 aa18.24■□□□□ 0.51
NIPSNAP1-204ENST00000455496 ABCC10Q5T3U5 1492 aa18.24■□□□□ 0.51
NIPSNAP1-204ENST00000455496 KDM6BO15054 1643 aa18.23■□□□□ 0.51
NIPSNAP1-204ENST00000455496 HECW2Q9P2P5 1572 aa18.21■□□□□ 0.51
NIPSNAP1-204ENST00000455496 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
NIPSNAP1-204ENST00000455496 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
NIPSNAP1-204ENST00000455496 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
NIPSNAP1-204ENST00000455496 ILDR2Q71H61 639 aa18.15■□□□□ 0.5
NIPSNAP1-204ENST00000455496 ADGRL1O94910 1474 aa18.14■□□□□ 0.49
NIPSNAP1-204ENST00000455496 DIP2BQ9P265 1576 aa18.08■□□□□ 0.48
NIPSNAP1-204ENST00000455496 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
NIPSNAP1-204ENST00000455496 MAPKBP1O60336 1514 aa18.07■□□□□ 0.48
NIPSNAP1-204ENST00000455496 NUP160Q12769 1436 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms