RNA–Protein interactions for RNA: ENST00000454783.5

LTA-214, Transcript of lymphotoxin alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LTA, Length 1,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-214ENST00000454783 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
LTA-214ENST00000454783 CCDC180Q9P1Z9 1646 aa35.08■■■■□ 3.21
LTA-214ENST00000454783 ABCC9O60706 1549 aa34.73■■■■□ 3.15
LTA-214ENST00000454783 RB1CC1Q8TDY2 1594 aa33.2■■■□□ 2.9
LTA-214ENST00000454783 NACADO15069 1562 aa33.05■■■□□ 2.88
LTA-214ENST00000454783 DCAF8L2P0C7V8 631 aa32.97■■■□□ 2.87
LTA-214ENST00000454783 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
LTA-214ENST00000454783 ZCCHC6Q5VYS8 1495 aaKnown RBP32.59■■■□□ 2.81
LTA-214ENST00000454783 UNC13AQ9UPW8 1703 aa32.54■■■□□ 2.8
LTA-214ENST00000454783 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
LTA-214ENST00000454783 PABPN1Q86U42 306 aaKnown RBP eCLIP32.39■■■□□ 2.78
LTA-214ENST00000454783 DNAJC5BQ9UF47 199 aa32.28■■■□□ 2.76
LTA-214ENST00000454783 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.75
LTA-214ENST00000454783 SCRIBQ14160 1630 aa32■■■□□ 2.71
LTA-214ENST00000454783 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
LTA-214ENST00000454783 EIF4G1Q04637 1599 aaKnown RBP31.41■■■□□ 2.62
LTA-214ENST00000454783 CC2D2AQ9P2K1 1620 aa31.4■■■□□ 2.62
LTA-214ENST00000454783 CECR2Q9BXF3 1484 aa31.23■■■□□ 2.59
LTA-214ENST00000454783 SMARCA4P51532 1647 aa30.56■■■□□ 2.48
LTA-214ENST00000454783 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
LTA-214ENST00000454783 ATAD2BQ9ULI0 1458 aa30.47■■■□□ 2.47
LTA-214ENST00000454783 BAZ1AQ9NRL2 1556 aaPredicted RBP30.42■■■□□ 2.46
LTA-214ENST00000454783 SMARCA2P51531 1590 aa30.4■■■□□ 2.46
LTA-214ENST00000454783 HMGXB3Q12766 1538 aa30.32■■■□□ 2.44
LTA-214ENST00000454783 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
LTA-214ENST00000454783 PEG3Q9GZU2 1588 aa30.23■■■□□ 2.43
LTA-214ENST00000454783 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
LTA-214ENST00000454783 NESP48681 1621 aa29.96■■■□□ 2.39
LTA-214ENST00000454783 WIZO95785 1651 aa29.94■■■□□ 2.38
LTA-214ENST00000454783 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
LTA-214ENST00000454783 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
LTA-214ENST00000454783 CUX2O14529 1486 aa29.75■■■□□ 2.35
LTA-214ENST00000454783 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
LTA-214ENST00000454783 KIF21AQ7Z4S6 1674 aa29.61■■■□□ 2.33
LTA-214ENST00000454783 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
LTA-214ENST00000454783 THOC2Q8NI27 1593 aaKnown RBP29.58■■■□□ 2.33
LTA-214ENST00000454783 PDS5BQ9NTI5 1447 aa29.56■■■□□ 2.32
LTA-214ENST00000454783 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
LTA-214ENST00000454783 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
LTA-214ENST00000454783 CFTRP13569 1480 aa29.33■■■□□ 2.29
LTA-214ENST00000454783 MRC2Q9UBG0 1479 aa29.31■■■□□ 2.28
LTA-214ENST00000454783 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.27
LTA-214ENST00000454783 CEP164Q9UPV0 1460 aa29.25■■■□□ 2.27
LTA-214ENST00000454783 WDR62O43379 1518 aa29.23■■■□□ 2.27
LTA-214ENST00000454783 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
LTA-214ENST00000454783 PRDM2Q13029 1718 aa29.14■■■□□ 2.25
LTA-214ENST00000454783 URB2Q14146 1524 aaKnown RBP29.02■■■□□ 2.24
LTA-214ENST00000454783 TOPBP1Q92547 1522 aa28.76■■■□□ 2.2
LTA-214ENST00000454783 SUPT5HO00267 1087 aaKnown RBP28.69■■■□□ 2.18
LTA-214ENST00000454783 DNMBPQ6XZF7 1577 aa28.69■■■□□ 2.18
LTA-214ENST00000454783 ABCC8Q09428 1581 aa28.68■■■□□ 2.18
LTA-214ENST00000454783 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
LTA-214ENST00000454783 ZNF608Q9ULD9 1512 aaPredicted RBP28.61■■■□□ 2.17
LTA-214ENST00000454783 TARBP1Q13395 1621 aaKnown RBP28.5■■■□□ 2.15
LTA-214ENST00000454783 POLA1P09884 1462 aaPredicted RBP28.49■■■□□ 2.15
LTA-214ENST00000454783 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
LTA-214ENST00000454783 OSCARQ8IYS5 282 aa28.44■■■□□ 2.14
LTA-214ENST00000454783 CUX1P39880 1505 aa28.41■■■□□ 2.14
LTA-214ENST00000454783 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.14
LTA-214ENST00000454783 AQRO60306 1485 aaKnown RBP eCLIP28.39■■■□□ 2.13
LTA-214ENST00000454783 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
LTA-214ENST00000454783 SOGA1O94964 1423 aa28.35■■■□□ 2.13
LTA-214ENST00000454783 TDRD9Q8NDG6 1382 aaKnown RBP28.27■■■□□ 2.12
LTA-214ENST00000454783 CHD1O14646 1710 aa28.23■■■□□ 2.11
LTA-214ENST00000454783 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
LTA-214ENST00000454783 WDR97A6NE52 1622 aa28.19■■■□□ 2.1
LTA-214ENST00000454783 FBLN2P98095 1184 aa28.12■■■□□ 2.09
LTA-214ENST00000454783 SNAPC4Q5SXM2 1469 aa28.11■■■□□ 2.09
LTA-214ENST00000454783 RIMBP3CA6NJZ7 1639 aa28.1■■■□□ 2.09
LTA-214ENST00000454783 RIMBP3BA6NNM3 1639 aa28.1■■■□□ 2.09
LTA-214ENST00000454783 RIMBP3Q9UFD9 1639 aa28.1■■■□□ 2.09
LTA-214ENST00000454783 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
LTA-214ENST00000454783 GRIN2BQ13224 1484 aa28.06■■■□□ 2.08
LTA-214ENST00000454783 ABCA10Q8WWZ4 1543 aa28.05■■■□□ 2.08
LTA-214ENST00000454783 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
LTA-214ENST00000454783 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
LTA-214ENST00000454783 PBRM1Q86U86 1689 aa28.04■■■□□ 2.08
LTA-214ENST00000454783 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.08
LTA-214ENST00000454783 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
LTA-214ENST00000454783 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
LTA-214ENST00000454783 ARHGEF11O15085 1522 aa28.02■■■□□ 2.08
LTA-214ENST00000454783 ABCA5Q8WWZ7 1642 aa28.01■■■□□ 2.07
LTA-214ENST00000454783 CHMP7Q8WUX9 453 aaPredicted RBP27.95■■■□□ 2.06
LTA-214ENST00000454783 SYNJ2O15056 1496 aa27.93■■■□□ 2.06
LTA-214ENST00000454783 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
LTA-214ENST00000454783 CYB5RLQ6IPT4 315 aa27.78■■■□□ 2.04
LTA-214ENST00000454783 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
LTA-214ENST00000454783 ADAMTS12P58397 1594 aa27.76■■■□□ 2.03
LTA-214ENST00000454783 GRIN2AQ12879 1464 aa27.71■■■□□ 2.03
LTA-214ENST00000454783 ERICH3Q5RHP9 1530 aa27.7■■■□□ 2.03
LTA-214ENST00000454783 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
LTA-214ENST00000454783 CEP170Q5SW79 1584 aa27.62■■■□□ 2.01
LTA-214ENST00000454783 NUP160Q12769 1436 aa27.6■■■□□ 2.01
LTA-214ENST00000454783 ERCC6L2Q5T890 1561 aa27.5■■□□□ 1.99
LTA-214ENST00000454783 KIF27Q86VH2 1401 aa27.47■■□□□ 1.99
LTA-214ENST00000454783 SHROOM2Q13796 1616 aa27.47■■□□□ 1.99
LTA-214ENST00000454783 IGF1RP08069 1367 aa27.44■■□□□ 1.98
LTA-214ENST00000454783 CUL7Q14999 1698 aa27.38■■□□□ 1.97
LTA-214ENST00000454783 RUSC2Q8N2Y8 1516 aa27.37■■□□□ 1.97
LTA-214ENST00000454783 TRHP20396 242 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms