RNA–Protein interactions for RNA: ENST00000454310.5

PLOD3-206, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS ALT2 TSL 5

Gene PLOD3, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-206ENST00000454310 NISCHQ9Y2I1 1504 aa37.31■■■■□ 3.56
PLOD3-206ENST00000454310 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
PLOD3-206ENST00000454310 ABCC9O60706 1549 aa31.7■■■□□ 2.67
PLOD3-206ENST00000454310 ZCCHC6Q5VYS8 1495 aaKnown RBP31.3■■■□□ 2.6
PLOD3-206ENST00000454310 DCAF1Q9Y4B6 1507 aa31■■■□□ 2.55
PLOD3-206ENST00000454310 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
PLOD3-206ENST00000454310 NACADO15069 1562 aa30.68■■■□□ 2.5
PLOD3-206ENST00000454310 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
PLOD3-206ENST00000454310 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
PLOD3-206ENST00000454310 SCRIBQ14160 1630 aa30■■■□□ 2.39
PLOD3-206ENST00000454310 UNC13AQ9UPW8 1703 aa29.89■■■□□ 2.38
PLOD3-206ENST00000454310 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
PLOD3-206ENST00000454310 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
PLOD3-206ENST00000454310 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
PLOD3-206ENST00000454310 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
PLOD3-206ENST00000454310 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
PLOD3-206ENST00000454310 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
PLOD3-206ENST00000454310 SMARCA4P51532 1647 aa28.82■■■□□ 2.2
PLOD3-206ENST00000454310 MROH2BQ7Z745 1585 aa28.72■■■□□ 2.19
PLOD3-206ENST00000454310 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
PLOD3-206ENST00000454310 EIF4G1Q04637 1599 aaKnown RBP28.67■■■□□ 2.18
PLOD3-206ENST00000454310 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
PLOD3-206ENST00000454310 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
PLOD3-206ENST00000454310 SUPT5HO00267 1087 aaKnown RBP28.53■■■□□ 2.16
PLOD3-206ENST00000454310 WIZO95785 1651 aa28.51■■■□□ 2.16
PLOD3-206ENST00000454310 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
PLOD3-206ENST00000454310 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
PLOD3-206ENST00000454310 TOP2AP11388 1531 aaKnown RBP28.3■■■□□ 2.12
PLOD3-206ENST00000454310 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
PLOD3-206ENST00000454310 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
PLOD3-206ENST00000454310 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
PLOD3-206ENST00000454310 CCDC88BA6NC98 1476 aa27.87■■■□□ 2.05
PLOD3-206ENST00000454310 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
PLOD3-206ENST00000454310 CFTRP13569 1480 aa27.47■■□□□ 1.99
PLOD3-206ENST00000454310 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
PLOD3-206ENST00000454310 CADPSQ9ULU8 1353 aa27.41■■□□□ 1.98
PLOD3-206ENST00000454310 NESP48681 1621 aa27.36■■□□□ 1.97
PLOD3-206ENST00000454310 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
PLOD3-206ENST00000454310 CHIC1Q5VXU3 224 aa27.17■■□□□ 1.94
PLOD3-206ENST00000454310 PDS5BQ9NTI5 1447 aa27.14■■□□□ 1.93
PLOD3-206ENST00000454310 ABCC8Q09428 1581 aa27.14■■□□□ 1.93
PLOD3-206ENST00000454310 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
PLOD3-206ENST00000454310 CUX2O14529 1486 aa27.12■■□□□ 1.93
PLOD3-206ENST00000454310 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
PLOD3-206ENST00000454310 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
PLOD3-206ENST00000454310 CEP164Q9UPV0 1460 aa27.05■■□□□ 1.92
PLOD3-206ENST00000454310 BIVM-ERCC5R4GMW8 1640 aa27.04■■□□□ 1.92
PLOD3-206ENST00000454310 TOP2BQ02880 1626 aa27■■□□□ 1.91
PLOD3-206ENST00000454310 SYNJ1O43426 1573 aa26.98■■□□□ 1.91
PLOD3-206ENST00000454310 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
PLOD3-206ENST00000454310 THOC2Q8NI27 1593 aaKnown RBP26.93■■□□□ 1.9
PLOD3-206ENST00000454310 CUX1P39880 1505 aa26.92■■□□□ 1.9
PLOD3-206ENST00000454310 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
PLOD3-206ENST00000454310 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
PLOD3-206ENST00000454310 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
PLOD3-206ENST00000454310 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
PLOD3-206ENST00000454310 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
PLOD3-206ENST00000454310 WDR62O43379 1518 aa26.73■■□□□ 1.87
PLOD3-206ENST00000454310 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
PLOD3-206ENST00000454310 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
PLOD3-206ENST00000454310 EEA1Q15075 1411 aa26.61■■□□□ 1.85
PLOD3-206ENST00000454310 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
PLOD3-206ENST00000454310 ABCA10Q8WWZ4 1543 aa26.51■■□□□ 1.83
PLOD3-206ENST00000454310 SOGA1O94964 1423 aa26.49■■□□□ 1.83
PLOD3-206ENST00000454310 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
PLOD3-206ENST00000454310 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
PLOD3-206ENST00000454310 IFT140Q96RY7 1462 aa26.44■■□□□ 1.82
PLOD3-206ENST00000454310 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
PLOD3-206ENST00000454310 ABCA5Q8WWZ7 1642 aa26.38■■□□□ 1.81
PLOD3-206ENST00000454310 RUSC2Q8N2Y8 1516 aa26.37■■□□□ 1.81
PLOD3-206ENST00000454310 FAM9AQ8IZU1 332 aaPredicted RBP26.3■■□□□ 1.8
PLOD3-206ENST00000454310 KIF21BO75037 1637 aa26.29■■□□□ 1.8
PLOD3-206ENST00000454310 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
PLOD3-206ENST00000454310 CSRNP3Q8WYN3 585 aa26.28■■□□□ 1.8
PLOD3-206ENST00000454310 CUL7Q14999 1698 aa26.25■■□□□ 1.79
PLOD3-206ENST00000454310 GAPVD1Q14C86 1478 aa26.25■■□□□ 1.79
PLOD3-206ENST00000454310 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
PLOD3-206ENST00000454310 EIF4G3O43432 1585 aaKnown RBP26.22■■□□□ 1.79
PLOD3-206ENST00000454310 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
PLOD3-206ENST00000454310 ZNF608Q9ULD9 1512 aaPredicted RBP26.15■■□□□ 1.78
PLOD3-206ENST00000454310 GOLGA3Q08378 1498 aa26.15■■□□□ 1.78
PLOD3-206ENST00000454310 PRXQ9BXM0 1461 aa26.15■■□□□ 1.78
PLOD3-206ENST00000454310 IGF1RP08069 1367 aa26.14■■□□□ 1.78
PLOD3-206ENST00000454310 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
PLOD3-206ENST00000454310 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.775e-7■■■■■ 31.2
PLOD3-206ENST00000454310 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
PLOD3-206ENST00000454310 RAPGEF2Q9Y4G8 1499 aa26.05■■□□□ 1.76
PLOD3-206ENST00000454310 CARMIL1Q5VZK9 1371 aa26.05■■□□□ 1.76
PLOD3-206ENST00000454310 OSCARQ8IYS5 282 aa26.03■■□□□ 1.76
PLOD3-206ENST00000454310 MAGI1Q96QZ7 1491 aaPredicted RBP26.01■■□□□ 1.75
PLOD3-206ENST00000454310 FHAD1B1AJZ9 1412 aa25.98■■□□□ 1.75
PLOD3-206ENST00000454310 LOC105371045A0A1W2PR82 267 aa25.97■■□□□ 1.75
PLOD3-206ENST00000454310 SNAPC4Q5SXM2 1469 aa25.96■■□□□ 1.75
PLOD3-206ENST00000454310 TNIKQ9UKE5 1360 aa25.94■■□□□ 1.74
PLOD3-206ENST00000454310 CTTNBP2Q8WZ74 1663 aa25.92■■□□□ 1.74
PLOD3-206ENST00000454310 UBTFP17480 764 aaKnown RBP25.87■■□□□ 1.73
PLOD3-206ENST00000454310 SYNJ2O15056 1496 aa25.86■■□□□ 1.73
PLOD3-206ENST00000454310 EHMT2Q96KQ7 1210 aa25.84■■□□□ 1.73
PLOD3-206ENST00000454310 GRIN2AQ12879 1464 aa25.8■■□□□ 1.72
PLOD3-206ENST00000454310 CHD1O14646 1710 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms