RNA–Protein interactions for RNA: ENST00000453000.1

CABP1-204, Transcript of calcium binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CABP1, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CABP1-204ENST00000453000 NISCHQ9Y2I1 1504 aa38.17■■■■□ 3.7
CABP1-204ENST00000453000 CCDC180Q9P1Z9 1646 aa33.56■■■□□ 2.96
CABP1-204ENST00000453000 ABCC9O60706 1549 aa32.39■■■□□ 2.78
CABP1-204ENST00000453000 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
CABP1-204ENST00000453000 DCAF8L2P0C7V8 631 aa31.69■■■□□ 2.66
CABP1-204ENST00000453000 DCAF1Q9Y4B6 1507 aa31.51■■■□□ 2.64
CABP1-204ENST00000453000 NACADO15069 1562 aa31.39■■■□□ 2.62
CABP1-204ENST00000453000 MYO15BQ96JP2 1530 aa31.37■■■□□ 2.61
CABP1-204ENST00000453000 RB1CC1Q8TDY2 1594 aa31.28■■■□□ 2.6
CABP1-204ENST00000453000 SCRIBQ14160 1630 aa30.83■■■□□ 2.53
CABP1-204ENST00000453000 UNC13AQ9UPW8 1703 aa30.74■■■□□ 2.51
CABP1-204ENST00000453000 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
CABP1-204ENST00000453000 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
CABP1-204ENST00000453000 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
CABP1-204ENST00000453000 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
CABP1-204ENST00000453000 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
CABP1-204ENST00000453000 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
CABP1-204ENST00000453000 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
CABP1-204ENST00000453000 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
CABP1-204ENST00000453000 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
CABP1-204ENST00000453000 CC2D2AQ9P2K1 1620 aa29.29■■■□□ 2.28
CABP1-204ENST00000453000 DNAJC5BQ9UF47 199 aa29.25■■■□□ 2.27
CABP1-204ENST00000453000 WIZO95785 1651 aa29.24■■■□□ 2.27
CABP1-204ENST00000453000 SUPT5HO00267 1087 aaKnown RBP29.19■■■□□ 2.26
CABP1-204ENST00000453000 ATAD2BQ9ULI0 1458 aa29.17■■■□□ 2.26
CABP1-204ENST00000453000 PEG3Q9GZU2 1588 aa29.14■■■□□ 2.26
CABP1-204ENST00000453000 SMARCA2P51531 1590 aa29.07■■■□□ 2.24
CABP1-204ENST00000453000 NCAPD3P42695 1498 aa29■■■□□ 2.23
CABP1-204ENST00000453000 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
CABP1-204ENST00000453000 HMGXB3Q12766 1538 aa28.9■■■□□ 2.22
CABP1-204ENST00000453000 TOP2AP11388 1531 aaKnown RBP28.86■■■□□ 2.21
CABP1-204ENST00000453000 CCDC88BA6NC98 1476 aa28.58■■■□□ 2.17
CABP1-204ENST00000453000 NESP48681 1621 aa28.27■■■□□ 2.12
CABP1-204ENST00000453000 CADPSQ9ULU8 1353 aa28.2■■■□□ 2.11
CABP1-204ENST00000453000 CFTRP13569 1480 aa28.18■■■□□ 2.1
CABP1-204ENST00000453000 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
CABP1-204ENST00000453000 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
CABP1-204ENST00000453000 PRDM2Q13029 1718 aa27.99■■■□□ 2.07
CABP1-204ENST00000453000 FANCD2Q9BXW9 1451 aa27.91■■■□□ 2.06
CABP1-204ENST00000453000 KIF21AQ7Z4S6 1674 aa27.9■■■□□ 2.06
CABP1-204ENST00000453000 PDS5BQ9NTI5 1447 aa27.87■■■□□ 2.05
CABP1-204ENST00000453000 ABCC8Q09428 1581 aa27.81■■■□□ 2.04
CABP1-204ENST00000453000 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
CABP1-204ENST00000453000 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
CABP1-204ENST00000453000 URB2Q14146 1524 aaKnown RBP27.65■■■□□ 2.02
CABP1-204ENST00000453000 CUX1P39880 1505 aa27.63■■■□□ 2.01
CABP1-204ENST00000453000 THOC2Q8NI27 1593 aaKnown RBP27.62■■■□□ 2.01
CABP1-204ENST00000453000 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
CABP1-204ENST00000453000 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
CABP1-204ENST00000453000 MRC2Q9UBG0 1479 aa27.61■■■□□ 2.01
CABP1-204ENST00000453000 TOPBP1Q92547 1522 aa27.55■■■□□ 2
CABP1-204ENST00000453000 DNMBPQ6XZF7 1577 aa27.53■■■□□ 2
CABP1-204ENST00000453000 WDR62O43379 1518 aa27.51■■□□□ 1.99
CABP1-204ENST00000453000 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
CABP1-204ENST00000453000 BIVM-ERCC5R4GMW8 1640 aa27.49■■□□□ 1.99
CABP1-204ENST00000453000 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
CABP1-204ENST00000453000 FGD5Q6ZNL6 1462 aa27.4■■□□□ 1.98
CABP1-204ENST00000453000 POLA1P09884 1462 aaPredicted RBP27.37■■□□□ 1.97
CABP1-204ENST00000453000 CUX2O14529 1486 aa27.33■■□□□ 1.97
CABP1-204ENST00000453000 RAD54L2Q9Y4B4 1467 aa27.31■■□□□ 1.96
CABP1-204ENST00000453000 SOGA1O94964 1423 aa27.23■■□□□ 1.95
CABP1-204ENST00000453000 TARBP1Q13395 1621 aaKnown RBP27.22■■□□□ 1.95
CABP1-204ENST00000453000 WDR97A6NE52 1622 aa27.15■■□□□ 1.94
CABP1-204ENST00000453000 IFT140Q96RY7 1462 aa27.14■■□□□ 1.94
CABP1-204ENST00000453000 ZNF608Q9ULD9 1512 aaPredicted RBP27.12■■□□□ 1.93
CABP1-204ENST00000453000 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
CABP1-204ENST00000453000 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
CABP1-204ENST00000453000 TDRD9Q8NDG6 1382 aaKnown RBP27.08■■□□□ 1.92
CABP1-204ENST00000453000 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.92
CABP1-204ENST00000453000 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
CABP1-204ENST00000453000 EIF4G3O43432 1585 aaKnown RBP26.98■■□□□ 1.91
CABP1-204ENST00000453000 FAM9AQ8IZU1 332 aaPredicted RBP26.97■■□□□ 1.91
CABP1-204ENST00000453000 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
CABP1-204ENST00000453000 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
CABP1-204ENST00000453000 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.9
CABP1-204ENST00000453000 EEA1Q15075 1411 aa26.86■■□□□ 1.89
CABP1-204ENST00000453000 PBRM1Q86U86 1689 aa26.86■■□□□ 1.89
CABP1-204ENST00000453000 IGF1RP08069 1367 aa26.84■■□□□ 1.89
CABP1-204ENST00000453000 GRIN2BQ13224 1484 aa26.8■■□□□ 1.88
CABP1-204ENST00000453000 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
CABP1-204ENST00000453000 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.88
CABP1-204ENST00000453000 SNAPC4Q5SXM2 1469 aa26.76■■□□□ 1.87
CABP1-204ENST00000453000 ADAMTS12P58397 1594 aa26.68■■□□□ 1.86
CABP1-204ENST00000453000 PRXQ9BXM0 1461 aa26.66■■□□□ 1.86
CABP1-204ENST00000453000 EHMT2Q96KQ7 1210 aa26.66■■□□□ 1.86
CABP1-204ENST00000453000 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
CABP1-204ENST00000453000 CUL7Q14999 1698 aa26.64■■□□□ 1.86
CABP1-204ENST00000453000 MAGI1Q96QZ7 1491 aaPredicted RBP26.64■■□□□ 1.85
CABP1-204ENST00000453000 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
CABP1-204ENST00000453000 RAPGEF2Q9Y4G8 1499 aa26.59■■□□□ 1.85
CABP1-204ENST00000453000 KIF21BO75037 1637 aa26.56■■□□□ 1.84
CABP1-204ENST00000453000 SYNJ2O15056 1496 aa26.56■■□□□ 1.84
CABP1-204ENST00000453000 CHD1O14646 1710 aa26.53■■□□□ 1.84
CABP1-204ENST00000453000 FBLN2P98095 1184 aa26.53■■□□□ 1.84
CABP1-204ENST00000453000 GRIN2AQ12879 1464 aa26.5■■□□□ 1.83
CABP1-204ENST00000453000 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
CABP1-204ENST00000453000 GOLGA3Q08378 1498 aa26.46■■□□□ 1.83
CABP1-204ENST00000453000 CEP170Q5SW79 1584 aa26.41■■□□□ 1.82
CABP1-204ENST00000453000 TNIKQ9UKE5 1360 aa26.4■■□□□ 1.82
CABP1-204ENST00000453000 NUP160Q12769 1436 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms