RNA–Protein interactions for RNA: ENST00000452725.5

STAMBP-207, Transcript of STAM binding protein, humanhuman

TSL 4

Gene STAMBP, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-207ENST00000452725 NISCHQ9Y2I1 1504 aa28.65■■■□□ 2.18
STAMBP-207ENST00000452725 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
STAMBP-207ENST00000452725 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
STAMBP-207ENST00000452725 CCDC180Q9P1Z9 1646 aa25.57■■□□□ 1.68
STAMBP-207ENST00000452725 ABCC9O60706 1549 aa25.27■■□□□ 1.64
STAMBP-207ENST00000452725 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
STAMBP-207ENST00000452725 NACADO15069 1562 aa24.11■■□□□ 1.45
STAMBP-207ENST00000452725 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
STAMBP-207ENST00000452725 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
STAMBP-207ENST00000452725 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.42
STAMBP-207ENST00000452725 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.41
STAMBP-207ENST00000452725 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
STAMBP-207ENST00000452725 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
STAMBP-207ENST00000452725 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
STAMBP-207ENST00000452725 BICRAQ9NZM4 1560 aa23.49■■□□□ 1.35
STAMBP-207ENST00000452725 DNAJC5BQ9UF47 199 aa23.43■■□□□ 1.34
STAMBP-207ENST00000452725 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
STAMBP-207ENST00000452725 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
STAMBP-207ENST00000452725 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
STAMBP-207ENST00000452725 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.26
STAMBP-207ENST00000452725 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
STAMBP-207ENST00000452725 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
STAMBP-207ENST00000452725 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
STAMBP-207ENST00000452725 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
STAMBP-207ENST00000452725 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
STAMBP-207ENST00000452725 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
STAMBP-207ENST00000452725 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
STAMBP-207ENST00000452725 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
STAMBP-207ENST00000452725 HMGXB3Q12766 1538 aa22.13■■□□□ 1.13
STAMBP-207ENST00000452725 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
STAMBP-207ENST00000452725 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.12
STAMBP-207ENST00000452725 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
STAMBP-207ENST00000452725 WIZO95785 1651 aa21.81■■□□□ 1.08
STAMBP-207ENST00000452725 NESP48681 1621 aa21.8■■□□□ 1.08
STAMBP-207ENST00000452725 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
STAMBP-207ENST00000452725 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
STAMBP-207ENST00000452725 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
STAMBP-207ENST00000452725 CUX2O14529 1486 aa21.67■■□□□ 1.06
STAMBP-207ENST00000452725 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
STAMBP-207ENST00000452725 CADPSQ9ULU8 1353 aa21.58■■□□□ 1.04
STAMBP-207ENST00000452725 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
STAMBP-207ENST00000452725 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
STAMBP-207ENST00000452725 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
STAMBP-207ENST00000452725 CFTRP13569 1480 aa21.42■■□□□ 1.02
STAMBP-207ENST00000452725 MRC2Q9UBG0 1479 aa21.37■■□□□ 1.01
STAMBP-207ENST00000452725 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
STAMBP-207ENST00000452725 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
STAMBP-207ENST00000452725 WDR62O43379 1518 aa21.32■■□□□ 1
STAMBP-207ENST00000452725 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
STAMBP-207ENST00000452725 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
STAMBP-207ENST00000452725 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
STAMBP-207ENST00000452725 FOXD1Q16676 465 aa21.17■□□□□ 0.98
STAMBP-207ENST00000452725 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
STAMBP-207ENST00000452725 ADRA2BP18089 450 aa21.03■□□□□ 0.96
STAMBP-207ENST00000452725 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
STAMBP-207ENST00000452725 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
STAMBP-207ENST00000452725 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
STAMBP-207ENST00000452725 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
STAMBP-207ENST00000452725 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
STAMBP-207ENST00000452725 IFT140Q96RY7 1462 aa20.91■□□□□ 0.94
STAMBP-207ENST00000452725 ZNF608Q9ULD9 1512 aaPredicted RBP20.85■□□□□ 0.93
STAMBP-207ENST00000452725 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
STAMBP-207ENST00000452725 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
STAMBP-207ENST00000452725 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
STAMBP-207ENST00000452725 CUX1P39880 1505 aa20.73■□□□□ 0.91
STAMBP-207ENST00000452725 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
STAMBP-207ENST00000452725 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
STAMBP-207ENST00000452725 OSCARQ8IYS5 282 aa20.69■□□□□ 0.9
STAMBP-207ENST00000452725 SOGA1O94964 1423 aa20.68■□□□□ 0.9
STAMBP-207ENST00000452725 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.92e-7■■■□□ 19.2
STAMBP-207ENST00000452725 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
STAMBP-207ENST00000452725 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
STAMBP-207ENST00000452725 CHD1O14646 1710 aa20.5■□□□□ 0.87
STAMBP-207ENST00000452725 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
STAMBP-207ENST00000452725 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.87
STAMBP-207ENST00000452725 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
STAMBP-207ENST00000452725 TOP2BQ02880 1626 aa20.47■□□□□ 0.87
STAMBP-207ENST00000452725 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
STAMBP-207ENST00000452725 GRIN2BQ13224 1484 aa20.47■□□□□ 0.87
STAMBP-207ENST00000452725 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
STAMBP-207ENST00000452725 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
STAMBP-207ENST00000452725 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
STAMBP-207ENST00000452725 FBLN2P98095 1184 aa20.45■□□□□ 0.86
STAMBP-207ENST00000452725 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
STAMBP-207ENST00000452725 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
STAMBP-207ENST00000452725 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
STAMBP-207ENST00000452725 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
STAMBP-207ENST00000452725 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
STAMBP-207ENST00000452725 ARHGEF11O15085 1522 aa20.4■□□□□ 0.86
STAMBP-207ENST00000452725 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
STAMBP-207ENST00000452725 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
STAMBP-207ENST00000452725 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
STAMBP-207ENST00000452725 KCNA4P22459 653 aa20.34■□□□□ 0.85
STAMBP-207ENST00000452725 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
STAMBP-207ENST00000452725 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
STAMBP-207ENST00000452725 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
STAMBP-207ENST00000452725 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
STAMBP-207ENST00000452725 GRIN2AQ12879 1464 aa20.22■□□□□ 0.83
STAMBP-207ENST00000452725 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
STAMBP-207ENST00000452725 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms