RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 NISCHQ9Y2I1 1504 aa6.53□□□□□ -1.36
ATM-203ENST00000452508 DCAF8L2P0C7V8 631 aa6.17□□□□□ -1.42
ATM-203ENST00000452508 FAM9AQ8IZU1 332 aaPredicted RBP6.02□□□□□ -1.45
ATM-203ENST00000452508 MYT1Q01538 1121 aa5.99□□□□□ -1.45
ATM-203ENST00000452508 SHROOM4Q9ULL8 1493 aa5.91□□□□□ -1.46
ATM-203ENST00000452508 PELP1Q8IZL8 1130 aaKnown RBP5.84□□□□□ -1.47
ATM-203ENST00000452508 SUPT5HO00267 1087 aaKnown RBP5.79□□□□□ -1.48
ATM-203ENST00000452508 CCDC180Q9P1Z9 1646 aa5.68□□□□□ -1.5
ATM-203ENST00000452508 ABCC9O60706 1549 aa5.64□□□□□ -1.51
ATM-203ENST00000452508 TTBK1Q5TCY1 1321 aaPredicted RBP5.64□□□□□ -1.51
ATM-203ENST00000452508 APLP2Q06481 763 aa5.64□□□□□ -1.51
ATM-203ENST00000452508 YTHDC1Q96MU7 727 aaKnown RBP5.56□□□□□ -1.52
ATM-203ENST00000452508 EHMT2Q96KQ7 1210 aa5.55□□□□□ -1.52
ATM-203ENST00000452508 CCER1Q8TC90 406 aaPredicted RBP5.49□□□□□ -1.53
ATM-203ENST00000452508 ZEB1P37275 1124 aaPredicted RBP5.48□□□□□ -1.53
ATM-203ENST00000452508 PABPN1Q86U42 306 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATM-203ENST00000452508 RB1CC1Q8TDY2 1594 aa5.46□□□□□ -1.53
ATM-203ENST00000452508 ZCCHC6Q5VYS8 1495 aaKnown RBP5.45□□□□□ -1.54
ATM-203ENST00000452508 SCRIBQ14160 1630 aa5.39□□□□□ -1.55
ATM-203ENST00000452508 NACADO15069 1562 aa5.37□□□□□ -1.55
ATM-203ENST00000452508 CLSPNQ9HAW4 1339 aa5.37□□□□□ -1.55
ATM-203ENST00000452508 TRIM41Q8WV44 630 aa5.35□□□□□ -1.55
ATM-203ENST00000452508 RANGAP1P46060 587 aaPredicted RBP5.33□□□□□ -1.56
ATM-203ENST00000452508 CENPBP07199 599 aaPredicted RBP5.29□□□□□ -1.56
ATM-203ENST00000452508 MYT1LQ9UL68 1186 aa5.29□□□□□ -1.56
ATM-203ENST00000452508 ACIN1Q9UKV3 1341 aaKnown RBP5.28□□□□□ -1.56
ATM-203ENST00000452508 ATP1B4Q9UN42 357 aaPredicted RBP5.24□□□□□ -1.57
ATM-203ENST00000452508 UBTFP17480 764 aaKnown RBP5.23□□□□□ -1.57
ATM-203ENST00000452508 CHIC1Q5VXU3 224 aa5.22□□□□□ -1.57
ATM-203ENST00000452508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.22□□□□□ -1.57
ATM-203ENST00000452508 HNRNPUL2Q1KMD3 747 aaKnown RBP5.22□□□□□ -1.57
ATM-203ENST00000452508 LOC105371045A0A1W2PR82 267 aa5.2□□□□□ -1.58
ATM-203ENST00000452508 NPM1P06748 294 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATM-203ENST00000452508 PPARGC1BQ86YN6 1023 aaKnown RBP5.19□□□□□ -1.58
ATM-203ENST00000452508 ESF1Q9H501 851 aaKnown RBP5.19□□□□□ -1.58
ATM-203ENST00000452508 ERCC6Q03468 1493 aa5.19□□□□□ -1.58
ATM-203ENST00000452508 DCAF1Q9Y4B6 1507 aa5.19□□□□□ -1.58
ATM-203ENST00000452508 CECR2Q9BXF3 1484 aa5.17□□□□□ -1.58
ATM-203ENST00000452508 CDK11AQ9UQ88 783 aaPredicted RBP5.16□□□□□ -1.58
ATM-203ENST00000452508 RSF1Q96T23 1441 aaPredicted RBP5.15□□□□□ -1.58
ATM-203ENST00000452508 SMARCA2P51531 1590 aa5.15□□□□□ -1.59
ATM-203ENST00000452508 PCGF6Q9BYE7 350 aa5.14□□□□□ -1.59
ATM-203ENST00000452508 ARID4BQ4LE39 1312 aaPredicted RBP5.13□□□□□ -1.59
ATM-203ENST00000452508 MYO15BQ96JP2 1530 aa5.13□□□□□ -1.59
ATM-203ENST00000452508 NEFMP07197 916 aa5.12□□□□□ -1.59
ATM-203ENST00000452508 ERICH6Q7L0X2 663 aa5.11□□□□□ -1.59
ATM-203ENST00000452508 BAZ1BQ9UIG0 1483 aaKnown RBP5.11□□□□□ -1.59
ATM-203ENST00000452508 BAZ1AQ9NRL2 1556 aaPredicted RBP5.1□□□□□ -1.59
ATM-203ENST00000452508 MROH2BQ7Z745 1585 aa5.1□□□□□ -1.59
ATM-203ENST00000452508 FBLN2P98095 1184 aa5.09□□□□□ -1.59
ATM-203ENST00000452508 NEFLP07196 543 aa5.06□□□□□ -1.6
ATM-203ENST00000452508 EIF5BO60841 1220 aaKnown RBP5.06□□□□□ -1.6
ATM-203ENST00000452508 ITGAEP38570 1179 aa5.03□□□□□ -1.6
ATM-203ENST00000452508 PDS5BQ9NTI5 1447 aa5.03□□□□□ -1.6
ATM-203ENST00000452508 WIZO95785 1651 aa5.02□□□□□ -1.61
ATM-203ENST00000452508 P3H3Q8IVL6 736 aa5.02□□□□□ -1.61
ATM-203ENST00000452508 CCDC88BA6NC98 1476 aa5.01□□□□□ -1.61
ATM-203ENST00000452508 BCANQ96GW7 911 aa5□□□□□ -1.61
ATM-203ENST00000452508 EEA1Q15075 1411 aa5□□□□□ -1.61
ATM-203ENST00000452508 GLIPR1L2Q4G1C9 344 aa5□□□□□ -1.61
ATM-203ENST00000452508 ABCC8Q09428 1581 aa5□□□□□ -1.61
ATM-203ENST00000452508 ARID3CA6NKF2 412 aa5□□□□□ -1.61
ATM-203ENST00000452508 CHMP7Q8WUX9 453 aaPredicted RBP4.99□□□□□ -1.61
ATM-203ENST00000452508 TRIM26Q12899 539 aaPredicted RBP4.99□□□□□ -1.61
ATM-203ENST00000452508 CSRNP3Q8WYN3 585 aa4.99□□□□□ -1.61
ATM-203ENST00000452508 STAG3Q9UJ98 1225 aa4.98□□□□□ -1.61
ATM-203ENST00000452508 SLC4A1APQ9BWU0 796 aaKnown RBP4.98□□□□□ -1.61
ATM-203ENST00000452508 ZBTB47Q9UFB7 747 aaPredicted RBP4.97□□□□□ -1.61
ATM-203ENST00000452508 SMARCA4P51532 1647 aa4.97□□□□□ -1.61
ATM-203ENST00000452508 ATAD2BQ9ULI0 1458 aa4.97□□□□□ -1.61
ATM-203ENST00000452508 WRNQ14191 1432 aaPredicted RBP eCLIP4.97□□□□□ -1.61
ATM-203ENST00000452508 TOP2AP11388 1531 aaKnown RBP4.97□□□□□ -1.61
ATM-203ENST00000452508 CLIP1P30622 1438 aa4.97□□□□□ -1.61
ATM-203ENST00000452508 DAXXQ9UER7 740 aaPredicted RBP4.97□□□□□ -1.61
ATM-203ENST00000452508 ANP32EQ9BTT0 268 aa4.96□□□□□ -1.62
ATM-203ENST00000452508 CEP162Q5TB80 1403 aa4.95□□□□□ -1.62
ATM-203ENST00000452508 FAM50AQ14320 339 aaKnown RBP4.95□□□□□ -1.62
ATM-203ENST00000452508 SLC24A1O60721 1099 aa4.94□□□□□ -1.62
ATM-203ENST00000452508 CARMIL2Q6F5E8 1435 aa4.94□□□□□ -1.62
ATM-203ENST00000452508 HDGFP51858 240 aaKnown RBP4.94□□□□□ -1.62
ATM-203ENST00000452508 SCAF1Q9H7N4 1312 aaKnown RBP4.94□□□□□ -1.62
ATM-203ENST00000452508 SOGA1O94964 1423 aa4.93□□□□□ -1.62
ATM-203ENST00000452508 FOXD1Q16676 465 aa4.93□□□□□ -1.62
ATM-203ENST00000452508 KIF27Q86VH2 1401 aa4.93□□□□□ -1.62
ATM-203ENST00000452508 KANK1Q14678 1352 aa4.92□□□□□ -1.62
ATM-203ENST00000452508 CEP164Q9UPV0 1460 aa4.92□□□□□ -1.62
ATM-203ENST00000452508 GOLGA3Q08378 1498 aa4.91□□□□□ -1.62
ATM-203ENST00000452508 EIF4G1Q04637 1599 aaKnown RBP4.91□□□□□ -1.62
ATM-203ENST00000452508 TRIM52Q96A61 297 aa4.91□□□□□ -1.62
ATM-203ENST00000452508 NEUROD1Q13562 356 aa4.91□□□□□ -1.62
ATM-203ENST00000452508 BICRAQ9NZM4 1560 aa4.91□□□□□ -1.62
ATM-203ENST00000452508 NPM2Q86SE8 214 aaKnown RBP4.9□□□□□ -1.63
ATM-203ENST00000452508 FHAD1B1AJZ9 1412 aa4.9□□□□□ -1.63
ATM-203ENST00000452508 PPP1R15AO75807 674 aaPredicted RBP4.89□□□□□ -1.63
ATM-203ENST00000452508 RTL5Q5HYW3 569 aaPredicted RBP4.89□□□□□ -1.63
ATM-203ENST00000452508 CUX2O14529 1486 aa4.88□□□□□ -1.63
ATM-203ENST00000452508 NCLP19338 710 aaKnown RBP4.88□□□□□ -1.63
ATM-203ENST00000452508 MTUS2Q5JR59 1369 aa4.88□□□□□ -1.63
ATM-203ENST00000452508 CADPSQ9ULU8 1353 aa4.88□□□□□ -1.63
ATM-203ENST00000452508 TSPY4P0CV99 314 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms