RNA–Protein interactions for RNA: ENST00000452025.5

RPE-214, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3 BASIC

Gene RPE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-214ENST00000452025 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
RPE-214ENST00000452025 ABCC9O60706 1549 aa25.27■■□□□ 1.64
RPE-214ENST00000452025 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
RPE-214ENST00000452025 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
RPE-214ENST00000452025 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
RPE-214ENST00000452025 NACADO15069 1562 aa23.65■■□□□ 1.38
RPE-214ENST00000452025 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
RPE-214ENST00000452025 PABPN1Q86U42 306 aaKnown RBP eCLIP23.39■■□□□ 1.33
RPE-214ENST00000452025 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
RPE-214ENST00000452025 BICRAQ9NZM4 1560 aa23.25■■□□□ 1.31
RPE-214ENST00000452025 MYO15BQ96JP2 1530 aa23.17■■□□□ 1.3
RPE-214ENST00000452025 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
RPE-214ENST00000452025 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
RPE-214ENST00000452025 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
RPE-214ENST00000452025 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
RPE-214ENST00000452025 CECR2Q9BXF3 1484 aa22.78■■□□□ 1.24
RPE-214ENST00000452025 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
RPE-214ENST00000452025 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
RPE-214ENST00000452025 DNAJC5Q9H3Z4 198 aa22.11■■□□□ 1.13
RPE-214ENST00000452025 CUX2O14529 1486 aa21.9■■□□□ 1.1
RPE-214ENST00000452025 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
RPE-214ENST00000452025 NCAPD3P42695 1498 aa21.77■■□□□ 1.07
RPE-214ENST00000452025 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
RPE-214ENST00000452025 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
RPE-214ENST00000452025 HMGXB3Q12766 1538 aa21.69■■□□□ 1.06
RPE-214ENST00000452025 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
RPE-214ENST00000452025 NESP48681 1621 aa21.63■■□□□ 1.05
RPE-214ENST00000452025 THOC2Q8NI27 1593 aaKnown RBP21.55■■□□□ 1.04
RPE-214ENST00000452025 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
RPE-214ENST00000452025 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
RPE-214ENST00000452025 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
RPE-214ENST00000452025 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
RPE-214ENST00000452025 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
RPE-214ENST00000452025 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
RPE-214ENST00000452025 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
RPE-214ENST00000452025 MRC2Q9UBG0 1479 aa21.14■□□□□ 0.98
RPE-214ENST00000452025 WDR62O43379 1518 aa21.12■□□□□ 0.97
RPE-214ENST00000452025 TRIM41Q8WV44 630 aa21.11■□□□□ 0.97
RPE-214ENST00000452025 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
RPE-214ENST00000452025 WIZO95785 1651 aa21.09■□□□□ 0.97
RPE-214ENST00000452025 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
RPE-214ENST00000452025 FANCD2Q9BXW9 1451 aa20.93■□□□□ 0.94
RPE-214ENST00000452025 CFTRP13569 1480 aa20.81■□□□□ 0.92
RPE-214ENST00000452025 URB2Q14146 1524 aaKnown RBP20.79■□□□□ 0.92
RPE-214ENST00000452025 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
RPE-214ENST00000452025 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
RPE-214ENST00000452025 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
RPE-214ENST00000452025 RIMBP3CA6NJZ7 1639 aa20.68■□□□□ 0.9
RPE-214ENST00000452025 RIMBP3BA6NNM3 1639 aa20.68■□□□□ 0.9
RPE-214ENST00000452025 RIMBP3Q9UFD9 1639 aa20.68■□□□□ 0.9
RPE-214ENST00000452025 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
RPE-214ENST00000452025 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.88
RPE-214ENST00000452025 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
RPE-214ENST00000452025 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
RPE-214ENST00000452025 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
RPE-214ENST00000452025 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
RPE-214ENST00000452025 CHD1O14646 1710 aa20.48■□□□□ 0.87
RPE-214ENST00000452025 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
RPE-214ENST00000452025 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
RPE-214ENST00000452025 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
RPE-214ENST00000452025 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
RPE-214ENST00000452025 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
RPE-214ENST00000452025 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.842e-6■■□□□ 13.2
RPE-214ENST00000452025 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
RPE-214ENST00000452025 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.84
RPE-214ENST00000452025 FBLN2P98095 1184 aa20.2■□□□□ 0.82
RPE-214ENST00000452025 RAD54L2Q9Y4B4 1467 aa20.19■□□□□ 0.82
RPE-214ENST00000452025 TRHP20396 242 aaPredicted RBP20.19■□□□□ 0.82
RPE-214ENST00000452025 SNAPC4Q5SXM2 1469 aa20.17■□□□□ 0.82
RPE-214ENST00000452025 CLASP1Q7Z460 1538 aa20.16■□□□□ 0.82
RPE-214ENST00000452025 WDR97A6NE52 1622 aa20.14■□□□□ 0.81
RPE-214ENST00000452025 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
RPE-214ENST00000452025 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
RPE-214ENST00000452025 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
RPE-214ENST00000452025 SOGA1O94964 1423 aa20.1■□□□□ 0.81
RPE-214ENST00000452025 PBRM1Q86U86 1689 aa20.07■□□□□ 0.8
RPE-214ENST00000452025 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
RPE-214ENST00000452025 CUX1P39880 1505 aa20.05■□□□□ 0.8
RPE-214ENST00000452025 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
RPE-214ENST00000452025 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
RPE-214ENST00000452025 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
RPE-214ENST00000452025 ABCA5Q8WWZ7 1642 aa19.92■□□□□ 0.78
RPE-214ENST00000452025 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
RPE-214ENST00000452025 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
RPE-214ENST00000452025 ERCC6L2Q5T890 1561 aa19.83■□□□□ 0.77
RPE-214ENST00000452025 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.77
RPE-214ENST00000452025 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
RPE-214ENST00000452025 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
RPE-214ENST00000452025 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
RPE-214ENST00000452025 SHROOM2Q13796 1616 aa19.72■□□□□ 0.75
RPE-214ENST00000452025 NUP160Q12769 1436 aa19.69■□□□□ 0.74
RPE-214ENST00000452025 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
RPE-214ENST00000452025 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
RPE-214ENST00000452025 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
RPE-214ENST00000452025 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
RPE-214ENST00000452025 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
RPE-214ENST00000452025 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
RPE-214ENST00000452025 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
RPE-214ENST00000452025 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.72
RPE-214ENST00000452025 SUPT5HO00267 1087 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms