RNA–Protein interactions for RNA: ENST00000450041.5

UBXN11-211, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-211ENST00000450041 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
UBXN11-211ENST00000450041 CCDC180Q9P1Z9 1646 aa33.29■■■□□ 2.92
UBXN11-211ENST00000450041 ABCC9O60706 1549 aa32.41■■■□□ 2.78
UBXN11-211ENST00000450041 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
UBXN11-211ENST00000450041 NACADO15069 1562 aa31.28■■■□□ 2.6
UBXN11-211ENST00000450041 RB1CC1Q8TDY2 1594 aa31.27■■■□□ 2.6
UBXN11-211ENST00000450041 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
UBXN11-211ENST00000450041 MYO15BQ96JP2 1530 aa31.18■■■□□ 2.58
UBXN11-211ENST00000450041 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
UBXN11-211ENST00000450041 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
UBXN11-211ENST00000450041 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
UBXN11-211ENST00000450041 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.44
UBXN11-211ENST00000450041 BICRAQ9NZM4 1560 aa30.31■■■□□ 2.44
UBXN11-211ENST00000450041 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
UBXN11-211ENST00000450041 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
UBXN11-211ENST00000450041 EIF4G1Q04637 1599 aaKnown RBP29.5■■■□□ 2.31
UBXN11-211ENST00000450041 CC2D2AQ9P2K1 1620 aa29.32■■■□□ 2.28
UBXN11-211ENST00000450041 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
UBXN11-211ENST00000450041 BAZ1AQ9NRL2 1556 aaPredicted RBP29.08■■■□□ 2.25
UBXN11-211ENST00000450041 SMARCA4P51532 1647 aa29.07■■■□□ 2.24
UBXN11-211ENST00000450041 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
UBXN11-211ENST00000450041 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
UBXN11-211ENST00000450041 NCAPD3P42695 1498 aa28.88■■■□□ 2.21
UBXN11-211ENST00000450041 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
UBXN11-211ENST00000450041 PEG3Q9GZU2 1588 aa28.81■■■□□ 2.2
UBXN11-211ENST00000450041 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
UBXN11-211ENST00000450041 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
UBXN11-211ENST00000450041 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
UBXN11-211ENST00000450041 WIZO95785 1651 aa28.58■■■□□ 2.16
UBXN11-211ENST00000450041 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
UBXN11-211ENST00000450041 NESP48681 1621 aa28.09■■■□□ 2.09
UBXN11-211ENST00000450041 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
UBXN11-211ENST00000450041 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
UBXN11-211ENST00000450041 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
UBXN11-211ENST00000450041 CCDC88BA6NC98 1476 aa27.97■■■□□ 2.07
UBXN11-211ENST00000450041 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
UBXN11-211ENST00000450041 CFTRP13569 1480 aa27.9■■■□□ 2.06
UBXN11-211ENST00000450041 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
UBXN11-211ENST00000450041 KIF21AQ7Z4S6 1674 aa27.73■■■□□ 2.03
UBXN11-211ENST00000450041 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.02
UBXN11-211ENST00000450041 CEP164Q9UPV0 1460 aa27.65■■■□□ 2.02
UBXN11-211ENST00000450041 PRDM2Q13029 1718 aa27.64■■■□□ 2.02
UBXN11-211ENST00000450041 THOC2Q8NI27 1593 aaKnown RBP27.64■■■□□ 2.01
UBXN11-211ENST00000450041 CUX2O14529 1486 aa27.63■■■□□ 2.01
UBXN11-211ENST00000450041 MRC2Q9UBG0 1479 aa27.58■■■□□ 2.01
UBXN11-211ENST00000450041 WDR62O43379 1518 aa27.48■■□□□ 1.99
UBXN11-211ENST00000450041 URB2Q14146 1524 aaKnown RBP27.41■■□□□ 1.98
UBXN11-211ENST00000450041 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
UBXN11-211ENST00000450041 TOPBP1Q92547 1522 aa27.27■■□□□ 1.96
UBXN11-211ENST00000450041 DNMBPQ6XZF7 1577 aa27.26■■□□□ 1.95
UBXN11-211ENST00000450041 CUX1P39880 1505 aa27.11■■□□□ 1.93
UBXN11-211ENST00000450041 IFT140Q96RY7 1462 aa27.08■■□□□ 1.93
UBXN11-211ENST00000450041 POLA1P09884 1462 aaPredicted RBP27.05■■□□□ 1.92
UBXN11-211ENST00000450041 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.91
UBXN11-211ENST00000450041 FGD5Q6ZNL6 1462 aa27■■□□□ 1.91
UBXN11-211ENST00000450041 TARBP1Q13395 1621 aaKnown RBP26.95■■□□□ 1.91
UBXN11-211ENST00000450041 SOGA1O94964 1423 aa26.94■■□□□ 1.9
UBXN11-211ENST00000450041 TOP2BQ02880 1626 aa26.93■■□□□ 1.9
UBXN11-211ENST00000450041 ZNF608Q9ULD9 1512 aaPredicted RBP26.91■■□□□ 1.9
UBXN11-211ENST00000450041 BIVM-ERCC5R4GMW8 1640 aa26.91■■□□□ 1.9
UBXN11-211ENST00000450041 RAD54L2Q9Y4B4 1467 aa26.91■■□□□ 1.9
UBXN11-211ENST00000450041 SYNJ1O43426 1573 aa26.9■■□□□ 1.9
UBXN11-211ENST00000450041 EIF4G3O43432 1585 aaKnown RBP26.81■■□□□ 1.88
UBXN11-211ENST00000450041 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
UBXN11-211ENST00000450041 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.88
UBXN11-211ENST00000450041 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
UBXN11-211ENST00000450041 ABCA10Q8WWZ4 1543 aa26.76■■□□□ 1.87
UBXN11-211ENST00000450041 GAPVD1Q14C86 1478 aa26.63■■□□□ 1.85
UBXN11-211ENST00000450041 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
UBXN11-211ENST00000450041 ABCA5Q8WWZ7 1642 aa26.62■■□□□ 1.85
UBXN11-211ENST00000450041 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
UBXN11-211ENST00000450041 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
UBXN11-211ENST00000450041 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
UBXN11-211ENST00000450041 PBRM1Q86U86 1689 aa26.53■■□□□ 1.84
UBXN11-211ENST00000450041 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
UBXN11-211ENST00000450041 TRIM41Q8WV44 630 aa26.45■■□□□ 1.82
UBXN11-211ENST00000450041 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
UBXN11-211ENST00000450041 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
UBXN11-211ENST00000450041 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
UBXN11-211ENST00000450041 FBLN2P98095 1184 aa26.42■■□□□ 1.82
UBXN11-211ENST00000450041 CHD1O14646 1710 aa26.42■■□□□ 1.82
UBXN11-211ENST00000450041 CHMP7Q8WUX9 453 aaPredicted RBP26.4■■□□□ 1.82
UBXN11-211ENST00000450041 ADAMTS12P58397 1594 aa26.37■■□□□ 1.81
UBXN11-211ENST00000450041 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
UBXN11-211ENST00000450041 IGF1RP08069 1367 aa26.32■■□□□ 1.8
UBXN11-211ENST00000450041 GRIN2AQ12879 1464 aa26.27■■□□□ 1.8
UBXN11-211ENST00000450041 CHIC1Q5VXU3 224 aa26.24■■□□□ 1.79
UBXN11-211ENST00000450041 CUL7Q14999 1698 aa26.22■■□□□ 1.79
UBXN11-211ENST00000450041 RUSC2Q8N2Y8 1516 aa26.2■■□□□ 1.79
UBXN11-211ENST00000450041 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
UBXN11-211ENST00000450041 NUP160Q12769 1436 aa26.16■■□□□ 1.78
UBXN11-211ENST00000450041 CARMIL1Q5VZK9 1371 aa26.15■■□□□ 1.78
UBXN11-211ENST00000450041 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
UBXN11-211ENST00000450041 EEA1Q15075 1411 aa26.05■■□□□ 1.76
UBXN11-211ENST00000450041 ARHGEF11O15085 1522 aa26.05■■□□□ 1.76
UBXN11-211ENST00000450041 RAPGEF2Q9Y4G8 1499 aa26.02■■□□□ 1.76
UBXN11-211ENST00000450041 RIMBP3CA6NJZ7 1639 aa26.02■■□□□ 1.76
UBXN11-211ENST00000450041 RIMBP3BA6NNM3 1639 aa26.02■■□□□ 1.76
UBXN11-211ENST00000450041 RIMBP3Q9UFD9 1639 aa26.02■■□□□ 1.76
UBXN11-211ENST00000450041 CSRNP3Q8WYN3 585 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms