RNA–Protein interactions for RNA: ENST00000449988.1

PHF20-205, Transcript of PHD finger protein 20, humanhuman

TSL 4

Gene PHF20, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-205ENST00000449988 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
PHF20-205ENST00000449988 AEBP2Q6ZN18 517 aaPredicted RBP19■□□□□ 0.63
PHF20-205ENST00000449988 ABCC9O60706 1549 aa18.53■□□□□ 0.56
PHF20-205ENST00000449988 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
PHF20-205ENST00000449988 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
PHF20-205ENST00000449988 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
PHF20-205ENST00000449988 RB1CC1Q8TDY2 1594 aa17.38■□□□□ 0.37
PHF20-205ENST00000449988 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
PHF20-205ENST00000449988 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
PHF20-205ENST00000449988 NACADO15069 1562 aa17.05■□□□□ 0.32
PHF20-205ENST00000449988 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
PHF20-205ENST00000449988 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
PHF20-205ENST00000449988 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
PHF20-205ENST00000449988 CC2D2AQ9P2K1 1620 aa16.77■□□□□ 0.27
PHF20-205ENST00000449988 DCAF8L2P0C7V8 631 aa16.63■□□□□ 0.25
PHF20-205ENST00000449988 SHROOM4Q9ULL8 1493 aa16.62■□□□□ 0.25
PHF20-205ENST00000449988 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
PHF20-205ENST00000449988 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
PHF20-205ENST00000449988 CUX2O14529 1486 aa16.42■□□□□ 0.22
PHF20-205ENST00000449988 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
PHF20-205ENST00000449988 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
PHF20-205ENST00000449988 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
PHF20-205ENST00000449988 SCRIBQ14160 1630 aa16.09■□□□□ 0.17
PHF20-205ENST00000449988 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
PHF20-205ENST00000449988 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
PHF20-205ENST00000449988 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
PHF20-205ENST00000449988 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
PHF20-205ENST00000449988 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
PHF20-205ENST00000449988 NESP48681 1621 aa15.65■□□□□ 0.1
PHF20-205ENST00000449988 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
PHF20-205ENST00000449988 SMARCA2P51531 1590 aa15.55■□□□□ 0.08
PHF20-205ENST00000449988 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
PHF20-205ENST00000449988 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
PHF20-205ENST00000449988 HMGXB3Q12766 1538 aa15.54■□□□□ 0.08
PHF20-205ENST00000449988 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
PHF20-205ENST00000449988 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
PHF20-205ENST00000449988 PDS5BQ9NTI5 1447 aa15.44■□□□□ 0.06
PHF20-205ENST00000449988 RIMBP3CA6NJZ7 1639 aa15.4■□□□□ 0.06
PHF20-205ENST00000449988 RIMBP3BA6NNM3 1639 aa15.4■□□□□ 0.06
PHF20-205ENST00000449988 RIMBP3Q9UFD9 1639 aa15.4■□□□□ 0.06
PHF20-205ENST00000449988 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.05
PHF20-205ENST00000449988 WDR62O43379 1518 aa15.33■□□□□ 0.05
PHF20-205ENST00000449988 BAZ1BQ9UIG0 1483 aaKnown RBP15.33■□□□□ 0.04
PHF20-205ENST00000449988 SMARCA4P51532 1647 aa15.31■□□□□ 0.04
PHF20-205ENST00000449988 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
PHF20-205ENST00000449988 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
PHF20-205ENST00000449988 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
PHF20-205ENST00000449988 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
PHF20-205ENST00000449988 CYB5RLQ6IPT4 315 aa15.14■□□□□ 0.01
PHF20-205ENST00000449988 CEP164Q9UPV0 1460 aa15.11■□□□□ 0.01
PHF20-205ENST00000449988 FOXD1Q16676 465 aa15.07■□□□□ 0
PHF20-205ENST00000449988 ARAP1Q96P48 1450 aa15□□□□□ -0.01
PHF20-205ENST00000449988 FANCD2Q9BXW9 1451 aa14.99□□□□□ -0.01
PHF20-205ENST00000449988 ILDR1Q86SU0 546 aaPredicted RBP14.93□□□□□ -0.02
PHF20-205ENST00000449988 RSF1Q96T23 1441 aaPredicted RBP14.91□□□□□ -0.02
PHF20-205ENST00000449988 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
PHF20-205ENST00000449988 CHD1O14646 1710 aa14.89□□□□□ -0.03
PHF20-205ENST00000449988 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
PHF20-205ENST00000449988 IFT140Q96RY7 1462 aa14.83□□□□□ -0.03
PHF20-205ENST00000449988 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
PHF20-205ENST00000449988 CFTRP13569 1480 aa14.82□□□□□ -0.04
PHF20-205ENST00000449988 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
PHF20-205ENST00000449988 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
PHF20-205ENST00000449988 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
PHF20-205ENST00000449988 WIZO95785 1651 aa14.68□□□□□ -0.06
PHF20-205ENST00000449988 FBLN2P98095 1184 aa14.68□□□□□ -0.06
PHF20-205ENST00000449988 CLASP1Q7Z460 1538 aa14.63□□□□□ -0.07
PHF20-205ENST00000449988 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
PHF20-205ENST00000449988 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
PHF20-205ENST00000449988 SYNJ1O43426 1573 aa14.6□□□□□ -0.07
PHF20-205ENST00000449988 AQRO60306 1485 aaKnown RBP eCLIP14.59□□□□□ -0.07
PHF20-205ENST00000449988 TARBP1Q13395 1621 aaKnown RBP14.58□□□□□ -0.08
PHF20-205ENST00000449988 KIF13AQ9H1H9 1805 aa14.55□□□□□ -0.08
PHF20-205ENST00000449988 GAPVD1Q14C86 1478 aa14.54□□□□□ -0.08
PHF20-205ENST00000449988 DNMBPQ6XZF7 1577 aa14.51□□□□□ -0.09
PHF20-205ENST00000449988 KDM4FA0A1W2PPD8 638 aa14.48□□□□□ -0.09
PHF20-205ENST00000449988 WDR97A6NE52 1622 aa14.46□□□□□ -0.09
PHF20-205ENST00000449988 CHMP7Q8WUX9 453 aaPredicted RBP14.46□□□□□ -0.09
PHF20-205ENST00000449988 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
PHF20-205ENST00000449988 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
PHF20-205ENST00000449988 ERCC6L2Q5T890 1561 aa14.43□□□□□ -0.1
PHF20-205ENST00000449988 MAGI1Q96QZ7 1491 aaPredicted RBP14.43□□□□□ -0.1
PHF20-205ENST00000449988 POLA1P09884 1462 aaPredicted RBP14.39□□□□□ -0.11
PHF20-205ENST00000449988 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
PHF20-205ENST00000449988 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
PHF20-205ENST00000449988 KDM6BO15054 1643 aa14.34□□□□□ -0.11
PHF20-205ENST00000449988 FBXO41Q8TF61 875 aa14.33□□□□□ -0.12
PHF20-205ENST00000449988 SOGA1O94964 1423 aa14.32□□□□□ -0.12
PHF20-205ENST00000449988 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
PHF20-205ENST00000449988 HECW2Q9P2P5 1572 aa14.31□□□□□ -0.12
PHF20-205ENST00000449988 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
PHF20-205ENST00000449988 PBRM1Q86U86 1689 aa14.28□□□□□ -0.12
PHF20-205ENST00000449988 ABCC10Q5T3U5 1492 aa14.26□□□□□ -0.13
PHF20-205ENST00000449988 FAM69CQ0P6D2 419 aa14.25□□□□□ -0.13
PHF20-205ENST00000449988 TSPOAP1O95153 1857 aa14.25□□□□□ -0.13
PHF20-205ENST00000449988 CCDC88BA6NC98 1476 aa14.24□□□□□ -0.13
PHF20-205ENST00000449988 CEP170Q5SW79 1584 aa14.23□□□□□ -0.13
PHF20-205ENST00000449988 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
PHF20-205ENST00000449988 ADRA2BP18089 450 aa14.22□□□□□ -0.13
PHF20-205ENST00000449988 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms