RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 NISCHQ9Y2I1 1504 aa28.51■■■□□ 2.15
NUP85-202ENST00000449421 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
NUP85-202ENST00000449421 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
NUP85-202ENST00000449421 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
NUP85-202ENST00000449421 ABCC9O60706 1549 aa24.19■■□□□ 1.46
NUP85-202ENST00000449421 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
NUP85-202ENST00000449421 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
NUP85-202ENST00000449421 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
NUP85-202ENST00000449421 NACADO15069 1562 aa23.61■■□□□ 1.37
NUP85-202ENST00000449421 DCAF8L2P0C7V8 631 aa23.52■■□□□ 1.36
NUP85-202ENST00000449421 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
NUP85-202ENST00000449421 UNC13AQ9UPW8 1703 aa23.04■■□□□ 1.28
NUP85-202ENST00000449421 SCRIBQ14160 1630 aa22.94■■□□□ 1.26
NUP85-202ENST00000449421 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
NUP85-202ENST00000449421 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
NUP85-202ENST00000449421 PABPN1Q86U42 306 aaKnown RBP eCLIP22.65■■□□□ 1.22
NUP85-202ENST00000449421 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.13
NUP85-202ENST00000449421 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
NUP85-202ENST00000449421 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
NUP85-202ENST00000449421 SMARCA4P51532 1647 aa22.04■■□□□ 1.12
NUP85-202ENST00000449421 SUPT5HO00267 1087 aaKnown RBP22.03■■□□□ 1.12
NUP85-202ENST00000449421 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
NUP85-202ENST00000449421 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.11
NUP85-202ENST00000449421 PHF23Q9BUL5 403 aaPredicted RBP21.89■■□□□ 1.09
NUP85-202ENST00000449421 DNAJC5BQ9UF47 199 aa21.89■■□□□ 1.09
NUP85-202ENST00000449421 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
NUP85-202ENST00000449421 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
NUP85-202ENST00000449421 ATAD2BQ9ULI0 1458 aa21.81■■□□□ 1.08
NUP85-202ENST00000449421 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
NUP85-202ENST00000449421 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
NUP85-202ENST00000449421 WIZO95785 1651 aa21.75■■□□□ 1.07
NUP85-202ENST00000449421 HMGXB3Q12766 1538 aa21.69■■□□□ 1.06
NUP85-202ENST00000449421 BAZ1BQ9UIG0 1483 aaKnown RBP21.62■■□□□ 1.05
NUP85-202ENST00000449421 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
NUP85-202ENST00000449421 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
NUP85-202ENST00000449421 LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
NUP85-202ENST00000449421 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
NUP85-202ENST00000449421 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
NUP85-202ENST00000449421 CFTRP13569 1480 aa21.1■□□□□ 0.97
NUP85-202ENST00000449421 NESP48681 1621 aa21.07■□□□□ 0.96
NUP85-202ENST00000449421 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
NUP85-202ENST00000449421 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
NUP85-202ENST00000449421 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
NUP85-202ENST00000449421 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
NUP85-202ENST00000449421 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
NUP85-202ENST00000449421 ERCC6Q03468 1493 aa20.8■□□□□ 0.92
NUP85-202ENST00000449421 CEP164Q9UPV0 1460 aa20.79■□□□□ 0.92
NUP85-202ENST00000449421 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
NUP85-202ENST00000449421 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
NUP85-202ENST00000449421 ABCC8Q09428 1581 aa20.64■□□□□ 0.9
NUP85-202ENST00000449421 WDR62O43379 1518 aa20.64■□□□□ 0.9
NUP85-202ENST00000449421 URB2Q14146 1524 aaKnown RBP20.64■□□□□ 0.9
NUP85-202ENST00000449421 DNMBPQ6XZF7 1577 aa20.6■□□□□ 0.89
NUP85-202ENST00000449421 TOPBP1Q92547 1522 aa20.58■□□□□ 0.89
NUP85-202ENST00000449421 CUX1P39880 1505 aa20.58■□□□□ 0.88
NUP85-202ENST00000449421 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
NUP85-202ENST00000449421 BIVM-ERCC5R4GMW8 1640 aa20.54■□□□□ 0.88
NUP85-202ENST00000449421 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
NUP85-202ENST00000449421 CUX2O14529 1486 aa20.52■□□□□ 0.88
NUP85-202ENST00000449421 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
NUP85-202ENST00000449421 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
NUP85-202ENST00000449421 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
NUP85-202ENST00000449421 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
NUP85-202ENST00000449421 IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
NUP85-202ENST00000449421 SOGA1O94964 1423 aa20.35■□□□□ 0.85
NUP85-202ENST00000449421 LOC105371045A0A1W2PR82 267 aa20.34■□□□□ 0.85
NUP85-202ENST00000449421 EEA1Q15075 1411 aa20.32■□□□□ 0.84
NUP85-202ENST00000449421 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
NUP85-202ENST00000449421 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
NUP85-202ENST00000449421 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
NUP85-202ENST00000449421 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
NUP85-202ENST00000449421 PLPPR3Q6T4P5 718 aa20.24■□□□□ 0.83
NUP85-202ENST00000449421 ZNF608Q9ULD9 1512 aaPredicted RBP20.21■□□□□ 0.83
NUP85-202ENST00000449421 ABCA5Q8WWZ7 1642 aa20.18■□□□□ 0.82
NUP85-202ENST00000449421 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
NUP85-202ENST00000449421 TDRD9Q8NDG6 1382 aaKnown RBP20.15■□□□□ 0.82
NUP85-202ENST00000449421 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.811e-6■■■■□ 21.1
NUP85-202ENST00000449421 CSRNP3Q8WYN3 585 aa20.14■□□□□ 0.81
NUP85-202ENST00000449421 GAPVD1Q14C86 1478 aa20.12■□□□□ 0.81
NUP85-202ENST00000449421 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
NUP85-202ENST00000449421 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
NUP85-202ENST00000449421 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
NUP85-202ENST00000449421 ERICH3Q5RHP9 1530 aa20.06■□□□□ 0.8
NUP85-202ENST00000449421 RUSC2Q8N2Y8 1516 aa20.04■□□□□ 0.8
NUP85-202ENST00000449421 IGF1RP08069 1367 aa20■□□□□ 0.79
NUP85-202ENST00000449421 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
NUP85-202ENST00000449421 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
NUP85-202ENST00000449421 TNIKQ9UKE5 1360 aa19.95■□□□□ 0.79
NUP85-202ENST00000449421 CUL7Q14999 1698 aa19.95■□□□□ 0.78
NUP85-202ENST00000449421 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
NUP85-202ENST00000449421 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
NUP85-202ENST00000449421 ADAMTS12P58397 1594 aa19.92■□□□□ 0.78
NUP85-202ENST00000449421 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
NUP85-202ENST00000449421 KIF21BO75037 1637 aa19.91■□□□□ 0.78
NUP85-202ENST00000449421 SYNJ2O15056 1496 aa19.9■□□□□ 0.78
NUP85-202ENST00000449421 UBTFP17480 764 aaKnown RBP19.89■□□□□ 0.77
NUP85-202ENST00000449421 CHD1O14646 1710 aa19.87■□□□□ 0.77
NUP85-202ENST00000449421 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
NUP85-202ENST00000449421 PRXQ9BXM0 1461 aa19.85■□□□□ 0.77
NUP85-202ENST00000449421 GRIN2AQ12879 1464 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms