RNA–Protein interactions for RNA: ENST00000449191.1

UBE2F-SCLY-201, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 3 BASIC

Gene UBE2F-SCLY, Length 951 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-201ENST00000449191 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
UBE2F-SCLY-201ENST00000449191 CCDC180Q9P1Z9 1646 aa22.38■■□□□ 1.17
UBE2F-SCLY-201ENST00000449191 ABCC9O60706 1549 aa22.18■■□□□ 1.14
UBE2F-SCLY-201ENST00000449191 RB1CC1Q8TDY2 1594 aa21.21■□□□□ 0.99
UBE2F-SCLY-201ENST00000449191 NACADO15069 1562 aa21.1■□□□□ 0.97
UBE2F-SCLY-201ENST00000449191 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
UBE2F-SCLY-201ENST00000449191 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
UBE2F-SCLY-201ENST00000449191 UNC13AQ9UPW8 1703 aa20.75■□□□□ 0.91
UBE2F-SCLY-201ENST00000449191 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
UBE2F-SCLY-201ENST00000449191 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
UBE2F-SCLY-201ENST00000449191 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
UBE2F-SCLY-201ENST00000449191 PABPN1Q86U42 306 aaKnown RBP eCLIP20.62■□□□□ 0.89
UBE2F-SCLY-201ENST00000449191 BICRAQ9NZM4 1560 aa20.58■□□□□ 0.88
UBE2F-SCLY-201ENST00000449191 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
UBE2F-SCLY-201ENST00000449191 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
UBE2F-SCLY-201ENST00000449191 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.8
UBE2F-SCLY-201ENST00000449191 EIF4G1Q04637 1599 aaKnown RBP20.07■□□□□ 0.8
UBE2F-SCLY-201ENST00000449191 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
UBE2F-SCLY-201ENST00000449191 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
UBE2F-SCLY-201ENST00000449191 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
UBE2F-SCLY-201ENST00000449191 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
UBE2F-SCLY-201ENST00000449191 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
UBE2F-SCLY-201ENST00000449191 BAZ1AQ9NRL2 1556 aaPredicted RBP19.36■□□□□ 0.69
UBE2F-SCLY-201ENST00000449191 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
UBE2F-SCLY-201ENST00000449191 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.67
UBE2F-SCLY-201ENST00000449191 BAZ1BQ9UIG0 1483 aaKnown RBP19.23■□□□□ 0.67
UBE2F-SCLY-201ENST00000449191 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
UBE2F-SCLY-201ENST00000449191 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
UBE2F-SCLY-201ENST00000449191 CUX2O14529 1486 aa19.1■□□□□ 0.65
UBE2F-SCLY-201ENST00000449191 NESP48681 1621 aa19.08■□□□□ 0.65
UBE2F-SCLY-201ENST00000449191 LAMC3Q9Y6N6 1575 aa19.02■□□□□ 0.63
UBE2F-SCLY-201ENST00000449191 WIZO95785 1651 aa18.98■□□□□ 0.63
UBE2F-SCLY-201ENST00000449191 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
UBE2F-SCLY-201ENST00000449191 KIF21AQ7Z4S6 1674 aa18.89■□□□□ 0.61
UBE2F-SCLY-201ENST00000449191 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
UBE2F-SCLY-201ENST00000449191 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
UBE2F-SCLY-201ENST00000449191 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
UBE2F-SCLY-201ENST00000449191 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
UBE2F-SCLY-201ENST00000449191 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
UBE2F-SCLY-201ENST00000449191 MRC2Q9UBG0 1479 aa18.72■□□□□ 0.59
UBE2F-SCLY-201ENST00000449191 WDR62O43379 1518 aa18.69■□□□□ 0.58
UBE2F-SCLY-201ENST00000449191 CFTRP13569 1480 aa18.67■□□□□ 0.58
UBE2F-SCLY-201ENST00000449191 CEP164Q9UPV0 1460 aa18.67■□□□□ 0.58
UBE2F-SCLY-201ENST00000449191 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
UBE2F-SCLY-201ENST00000449191 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
UBE2F-SCLY-201ENST00000449191 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
UBE2F-SCLY-201ENST00000449191 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
UBE2F-SCLY-201ENST00000449191 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
UBE2F-SCLY-201ENST00000449191 IFT140Q96RY7 1462 aa18.29■□□□□ 0.52
UBE2F-SCLY-201ENST00000449191 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
UBE2F-SCLY-201ENST00000449191 DNMBPQ6XZF7 1577 aa18.28■□□□□ 0.52
UBE2F-SCLY-201ENST00000449191 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
UBE2F-SCLY-201ENST00000449191 EIF4G3O43432 1585 aaKnown RBP18.18■□□□□ 0.5
UBE2F-SCLY-201ENST00000449191 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
UBE2F-SCLY-201ENST00000449191 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
UBE2F-SCLY-201ENST00000449191 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
UBE2F-SCLY-201ENST00000449191 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
UBE2F-SCLY-201ENST00000449191 AQRO60306 1485 aaKnown RBP eCLIP18.06■□□□□ 0.485e-8■■■□□ 18.3
UBE2F-SCLY-201ENST00000449191 CUX1P39880 1505 aa18.04■□□□□ 0.48
UBE2F-SCLY-201ENST00000449191 FGD5Q6ZNL6 1462 aa18.04■□□□□ 0.48
UBE2F-SCLY-201ENST00000449191 RAD54L2Q9Y4B4 1467 aa18.04■□□□□ 0.48
UBE2F-SCLY-201ENST00000449191 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
UBE2F-SCLY-201ENST00000449191 WDR97A6NE52 1622 aa18.02■□□□□ 0.48
UBE2F-SCLY-201ENST00000449191 CHD1O14646 1710 aa18.02■□□□□ 0.48
UBE2F-SCLY-201ENST00000449191 SOGA1O94964 1423 aa18.02■□□□□ 0.48
UBE2F-SCLY-201ENST00000449191 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
UBE2F-SCLY-201ENST00000449191 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
UBE2F-SCLY-201ENST00000449191 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
UBE2F-SCLY-201ENST00000449191 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
UBE2F-SCLY-201ENST00000449191 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
UBE2F-SCLY-201ENST00000449191 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
UBE2F-SCLY-201ENST00000449191 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
UBE2F-SCLY-201ENST00000449191 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
UBE2F-SCLY-201ENST00000449191 FBLN2P98095 1184 aa17.88■□□□□ 0.45
UBE2F-SCLY-201ENST00000449191 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
UBE2F-SCLY-201ENST00000449191 ABCA10Q8WWZ4 1543 aa17.85■□□□□ 0.45
UBE2F-SCLY-201ENST00000449191 ABCA5Q8WWZ7 1642 aa17.84■□□□□ 0.45
UBE2F-SCLY-201ENST00000449191 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.45
UBE2F-SCLY-201ENST00000449191 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.44
UBE2F-SCLY-201ENST00000449191 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
UBE2F-SCLY-201ENST00000449191 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
UBE2F-SCLY-201ENST00000449191 SYNJ1O43426 1573 aa17.81■□□□□ 0.44
UBE2F-SCLY-201ENST00000449191 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
UBE2F-SCLY-201ENST00000449191 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
UBE2F-SCLY-201ENST00000449191 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
UBE2F-SCLY-201ENST00000449191 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
UBE2F-SCLY-201ENST00000449191 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
UBE2F-SCLY-201ENST00000449191 ADAMTS12P58397 1594 aa17.7■□□□□ 0.42
UBE2F-SCLY-201ENST00000449191 GRIN2AQ12879 1464 aa17.66■□□□□ 0.42
UBE2F-SCLY-201ENST00000449191 ERICH3Q5RHP9 1530 aa17.64■□□□□ 0.41
UBE2F-SCLY-201ENST00000449191 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
UBE2F-SCLY-201ENST00000449191 NUP160Q12769 1436 aa17.6■□□□□ 0.41
UBE2F-SCLY-201ENST00000449191 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
UBE2F-SCLY-201ENST00000449191 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
UBE2F-SCLY-201ENST00000449191 ERCC6L2Q5T890 1561 aa17.52■□□□□ 0.39
UBE2F-SCLY-201ENST00000449191 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
UBE2F-SCLY-201ENST00000449191 RUSC2Q8N2Y8 1516 aa17.45■□□□□ 0.38
UBE2F-SCLY-201ENST00000449191 KIF27Q86VH2 1401 aa17.43■□□□□ 0.38
UBE2F-SCLY-201ENST00000449191 CUL7Q14999 1698 aa17.42■□□□□ 0.38
UBE2F-SCLY-201ENST00000449191 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms