RNA–Protein interactions for RNA: ENST00000449073.2

LINC01143-201, Transcript of long intergenic non-protein coding RNA 1143, humanhuman

TSL 2 BASIC

Gene LINC01143, Length 625 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01143-201ENST00000449073 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.03
LINC01143-201ENST00000449073 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.36
LINC01143-201ENST00000449073 ABCC9O60706 1549 aa35.76■■■■□ 3.31
LINC01143-201ENST00000449073 RB1CC1Q8TDY2 1594 aa34.22■■■■□ 3.07
LINC01143-201ENST00000449073 DCAF8L2P0C7V8 631 aa34.07■■■■□ 3.04
LINC01143-201ENST00000449073 NACADO15069 1562 aa34.03■■■■□ 3.04
LINC01143-201ENST00000449073 MYO15BQ96JP2 1530 aa33.62■■■□□ 2.97
LINC01143-201ENST00000449073 ZCCHC6Q5VYS8 1495 aaKnown RBP33.43■■■□□ 2.94
LINC01143-201ENST00000449073 PABPN1Q86U42 306 aaKnown RBP eCLIP33.34■■■□□ 2.93
LINC01143-201ENST00000449073 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
LINC01143-201ENST00000449073 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
LINC01143-201ENST00000449073 DNAJC5BQ9UF47 199 aa33.1■■■□□ 2.89
LINC01143-201ENST00000449073 BICRAQ9NZM4 1560 aa32.99■■■□□ 2.87
LINC01143-201ENST00000449073 SCRIBQ14160 1630 aa32.84■■■□□ 2.85
LINC01143-201ENST00000449073 SHROOM4Q9ULL8 1493 aa32.81■■■□□ 2.84
LINC01143-201ENST00000449073 EIF4G1Q04637 1599 aaKnown RBP32.28■■■□□ 2.76
LINC01143-201ENST00000449073 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.76
LINC01143-201ENST00000449073 CECR2Q9BXF3 1484 aa32.21■■■□□ 2.75
LINC01143-201ENST00000449073 NCAPD3P42695 1498 aa31.37■■■□□ 2.61
LINC01143-201ENST00000449073 SMARCA4P51532 1647 aa31.33■■■□□ 2.61
LINC01143-201ENST00000449073 SMARCA2P51531 1590 aa31.33■■■□□ 2.61
LINC01143-201ENST00000449073 BAZ1AQ9NRL2 1556 aaPredicted RBP31.31■■■□□ 2.6
LINC01143-201ENST00000449073 ATAD2BQ9ULI0 1458 aa31.31■■■□□ 2.6
LINC01143-201ENST00000449073 HMGXB3Q12766 1538 aa31.18■■■□□ 2.58
LINC01143-201ENST00000449073 BAZ1BQ9UIG0 1483 aaKnown RBP31.11■■■□□ 2.57
LINC01143-201ENST00000449073 ERCC6Q03468 1493 aa31■■■□□ 2.55
LINC01143-201ENST00000449073 PEG3Q9GZU2 1588 aa31■■■□□ 2.55
LINC01143-201ENST00000449073 MROH2BQ7Z745 1585 aa30.97■■■□□ 2.55
LINC01143-201ENST00000449073 CUX2O14529 1486 aa30.76■■■□□ 2.51
LINC01143-201ENST00000449073 NESP48681 1621 aa30.71■■■□□ 2.51
LINC01143-201ENST00000449073 LAMC3Q9Y6N6 1575 aa30.66■■■□□ 2.5
LINC01143-201ENST00000449073 WIZO95785 1651 aa30.61■■■□□ 2.49
LINC01143-201ENST00000449073 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
LINC01143-201ENST00000449073 CADPSQ9ULU8 1353 aa30.48■■■□□ 2.47
LINC01143-201ENST00000449073 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
LINC01143-201ENST00000449073 THOC2Q8NI27 1593 aaKnown RBP30.34■■■□□ 2.45
LINC01143-201ENST00000449073 DNAJC5Q9H3Z4 198 aa30.34■■■□□ 2.45
LINC01143-201ENST00000449073 TOP2AP11388 1531 aaKnown RBP30.33■■■□□ 2.45
LINC01143-201ENST00000449073 KIF21AQ7Z4S6 1674 aa30.32■■■□□ 2.44
LINC01143-201ENST00000449073 MRC2Q9UBG0 1479 aa30.21■■■□□ 2.43
LINC01143-201ENST00000449073 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
LINC01143-201ENST00000449073 CFTRP13569 1480 aa30.15■■■□□ 2.42
LINC01143-201ENST00000449073 FANCD2Q9BXW9 1451 aa30.13■■■□□ 2.41
LINC01143-201ENST00000449073 WDR62O43379 1518 aa30.06■■■□□ 2.4
LINC01143-201ENST00000449073 CCDC88BA6NC98 1476 aa29.95■■■□□ 2.39
LINC01143-201ENST00000449073 PRDM2Q13029 1718 aa29.82■■■□□ 2.36
LINC01143-201ENST00000449073 URB2Q14146 1524 aaKnown RBP29.77■■■□□ 2.36
LINC01143-201ENST00000449073 ABCC8Q09428 1581 aa29.64■■■□□ 2.34
LINC01143-201ENST00000449073 IFT140Q96RY7 1462 aa29.56■■■□□ 2.32
LINC01143-201ENST00000449073 TOPBP1Q92547 1522 aa29.55■■■□□ 2.32
LINC01143-201ENST00000449073 SUPT5HO00267 1087 aaKnown RBP29.52■■■□□ 2.32
LINC01143-201ENST00000449073 DNMBPQ6XZF7 1577 aa29.5■■■□□ 2.31
LINC01143-201ENST00000449073 OSCARQ8IYS5 282 aa29.46■■■□□ 2.31
LINC01143-201ENST00000449073 ZNF608Q9ULD9 1512 aaPredicted RBP29.35■■■□□ 2.29
LINC01143-201ENST00000449073 TRIM41Q8WV44 630 aa29.27■■■□□ 2.28
LINC01143-201ENST00000449073 POLA1P09884 1462 aaPredicted RBP29.27■■■□□ 2.28
LINC01143-201ENST00000449073 EIF4G3O43432 1585 aaKnown RBP29.25■■■□□ 2.27
LINC01143-201ENST00000449073 SOGA1O94964 1423 aa29.21■■■□□ 2.27
LINC01143-201ENST00000449073 TARBP1Q13395 1621 aaKnown RBP29.19■■■□□ 2.26
LINC01143-201ENST00000449073 AQRO60306 1485 aaKnown RBP eCLIP29.17■■■□□ 2.26
LINC01143-201ENST00000449073 FGD5Q6ZNL6 1462 aa29.15■■■□□ 2.26
LINC01143-201ENST00000449073 RAD54L2Q9Y4B4 1467 aa29.13■■■□□ 2.25
LINC01143-201ENST00000449073 FBLN2P98095 1184 aa29.11■■■□□ 2.25
LINC01143-201ENST00000449073 CUX1P39880 1505 aa29.1■■■□□ 2.25
LINC01143-201ENST00000449073 TDRD9Q8NDG6 1382 aaKnown RBP29.08■■■□□ 2.25
LINC01143-201ENST00000449073 WDR97A6NE52 1622 aa29.06■■■□□ 2.24
LINC01143-201ENST00000449073 GRIN2BQ13224 1484 aa28.94■■■□□ 2.22
LINC01143-201ENST00000449073 CHMP7Q8WUX9 453 aaPredicted RBP28.94■■■□□ 2.22
LINC01143-201ENST00000449073 SNAPC4Q5SXM2 1469 aa28.93■■■□□ 2.22
LINC01143-201ENST00000449073 CHD1O14646 1710 aa28.93■■■□□ 2.22
LINC01143-201ENST00000449073 MAGI1Q96QZ7 1491 aaPredicted RBP28.91■■■□□ 2.22
LINC01143-201ENST00000449073 RIMBP3CA6NJZ7 1639 aa28.88■■■□□ 2.21
LINC01143-201ENST00000449073 RIMBP3BA6NNM3 1639 aa28.88■■■□□ 2.21
LINC01143-201ENST00000449073 RIMBP3Q9UFD9 1639 aa28.88■■■□□ 2.21
LINC01143-201ENST00000449073 WRNQ14191 1432 aaPredicted RBP eCLIP28.87■■■□□ 2.21
LINC01143-201ENST00000449073 ARHGEF11O15085 1522 aa28.87■■■□□ 2.21
LINC01143-201ENST00000449073 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
LINC01143-201ENST00000449073 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
LINC01143-201ENST00000449073 SYNJ2O15056 1496 aa28.78■■■□□ 2.2
LINC01143-201ENST00000449073 SYNJ1O43426 1573 aa28.78■■■□□ 2.2
LINC01143-201ENST00000449073 TOP2BQ02880 1626 aa28.75■■■□□ 2.19
LINC01143-201ENST00000449073 PBRM1Q86U86 1689 aa28.74■■■□□ 2.19
LINC01143-201ENST00000449073 CYB5RLQ6IPT4 315 aa28.73■■■□□ 2.19
LINC01143-201ENST00000449073 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
LINC01143-201ENST00000449073 ABCA5Q8WWZ7 1642 aa28.7■■■□□ 2.19
LINC01143-201ENST00000449073 CLASP1Q7Z460 1538 aa28.61■■■□□ 2.17
LINC01143-201ENST00000449073 ARAP1Q96P48 1450 aa28.57■■■□□ 2.16
LINC01143-201ENST00000449073 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
LINC01143-201ENST00000449073 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
LINC01143-201ENST00000449073 ERICH3Q5RHP9 1530 aa28.51■■■□□ 2.15
LINC01143-201ENST00000449073 ADAMTS12P58397 1594 aa28.5■■■□□ 2.15
LINC01143-201ENST00000449073 TRHP20396 242 aaPredicted RBP28.43■■■□□ 2.14
LINC01143-201ENST00000449073 NUP160Q12769 1436 aa28.38■■■□□ 2.13
LINC01143-201ENST00000449073 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
LINC01143-201ENST00000449073 CEP170Q5SW79 1584 aa28.33■■■□□ 2.12
LINC01143-201ENST00000449073 JPH4Q96JJ6 628 aa28.17■■■□□ 2.1
LINC01143-201ENST00000449073 CUL7Q14999 1698 aa28.16■■■□□ 2.1
LINC01143-201ENST00000449073 IGF1RP08069 1367 aa28.16■■■□□ 2.1
LINC01143-201ENST00000449073 SHROOM2Q13796 1616 aa28.15■■■□□ 2.1
LINC01143-201ENST00000449073 PRG4Q92954 1404 aaPredicted RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms