RNA–Protein interactions for RNA: ENST00000448979.3

AC023509.3-201, humanhuman

TSL 1 (best)

Gene AC023509.3, Length 1,406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023509.3-201ENST00000448979 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
AC023509.3-201ENST00000448979 AEBP2Q6ZN18 517 aaPredicted RBP27.77■■■□□ 2.04
AC023509.3-201ENST00000448979 CCDC180Q9P1Z9 1646 aa27.39■■□□□ 1.98
AC023509.3-201ENST00000448979 ABCC9O60706 1549 aa27.36■■□□□ 1.97
AC023509.3-201ENST00000448979 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
AC023509.3-201ENST00000448979 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
AC023509.3-201ENST00000448979 RB1CC1Q8TDY2 1594 aa25.98■■□□□ 1.75
AC023509.3-201ENST00000448979 NACADO15069 1562 aa25.84■■□□□ 1.73
AC023509.3-201ENST00000448979 PABPN1Q86U42 306 aaKnown RBP eCLIP25.57■■□□□ 1.68
AC023509.3-201ENST00000448979 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
AC023509.3-201ENST00000448979 DNAJC5BQ9UF47 199 aa25.54■■□□□ 1.68
AC023509.3-201ENST00000448979 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
AC023509.3-201ENST00000448979 MYO15BQ96JP2 1530 aa25.48■■□□□ 1.67
AC023509.3-201ENST00000448979 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
AC023509.3-201ENST00000448979 DCAF1Q9Y4B6 1507 aa25.28■■□□□ 1.64
AC023509.3-201ENST00000448979 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
AC023509.3-201ENST00000448979 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
AC023509.3-201ENST00000448979 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
AC023509.3-201ENST00000448979 EIF4G1Q04637 1599 aaKnown RBP24.65■■□□□ 1.54
AC023509.3-201ENST00000448979 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
AC023509.3-201ENST00000448979 SMARCA4P51532 1647 aa23.95■■□□□ 1.42
AC023509.3-201ENST00000448979 ATAD2BQ9ULI0 1458 aa23.91■■□□□ 1.42
AC023509.3-201ENST00000448979 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
AC023509.3-201ENST00000448979 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
AC023509.3-201ENST00000448979 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
AC023509.3-201ENST00000448979 SMARCA2P51531 1590 aa23.76■■□□□ 1.39
AC023509.3-201ENST00000448979 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
AC023509.3-201ENST00000448979 BAZ1BQ9UIG0 1483 aaKnown RBP23.67■■□□□ 1.38
AC023509.3-201ENST00000448979 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
AC023509.3-201ENST00000448979 PEG3Q9GZU2 1588 aa23.63■■□□□ 1.37
AC023509.3-201ENST00000448979 NESP48681 1621 aa23.62■■□□□ 1.37
AC023509.3-201ENST00000448979 WIZO95785 1651 aa23.54■■□□□ 1.36
AC023509.3-201ENST00000448979 ERCC6Q03468 1493 aa23.5■■□□□ 1.35
AC023509.3-201ENST00000448979 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
AC023509.3-201ENST00000448979 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
AC023509.3-201ENST00000448979 CUX2O14529 1486 aa23.3■■□□□ 1.32
AC023509.3-201ENST00000448979 LAMC3Q9Y6N6 1575 aa23.29■■□□□ 1.32
AC023509.3-201ENST00000448979 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
AC023509.3-201ENST00000448979 THOC2Q8NI27 1593 aaKnown RBP23.22■■□□□ 1.31
AC023509.3-201ENST00000448979 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
AC023509.3-201ENST00000448979 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.29
AC023509.3-201ENST00000448979 PDS5BQ9NTI5 1447 aa23.14■■□□□ 1.29
AC023509.3-201ENST00000448979 DNAJC5Q9H3Z4 198 aa23.11■■□□□ 1.29
AC023509.3-201ENST00000448979 CFTRP13569 1480 aa22.98■■□□□ 1.27
AC023509.3-201ENST00000448979 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
AC023509.3-201ENST00000448979 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
AC023509.3-201ENST00000448979 CCDC88BA6NC98 1476 aa22.94■■□□□ 1.26
AC023509.3-201ENST00000448979 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
AC023509.3-201ENST00000448979 WDR62O43379 1518 aa22.91■■□□□ 1.26
AC023509.3-201ENST00000448979 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
AC023509.3-201ENST00000448979 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
AC023509.3-201ENST00000448979 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
AC023509.3-201ENST00000448979 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
AC023509.3-201ENST00000448979 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
AC023509.3-201ENST00000448979 DNMBPQ6XZF7 1577 aa22.47■■□□□ 1.19
AC023509.3-201ENST00000448979 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
AC023509.3-201ENST00000448979 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
AC023509.3-201ENST00000448979 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
AC023509.3-201ENST00000448979 TARBP1Q13395 1621 aaKnown RBP22.36■■□□□ 1.17
AC023509.3-201ENST00000448979 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
AC023509.3-201ENST00000448979 EIF4G3O43432 1585 aaKnown RBP22.35■■□□□ 1.17
AC023509.3-201ENST00000448979 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
AC023509.3-201ENST00000448979 OSCARQ8IYS5 282 aa22.34■■□□□ 1.17
AC023509.3-201ENST00000448979 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
AC023509.3-201ENST00000448979 CUX1P39880 1505 aa22.31■■□□□ 1.16
AC023509.3-201ENST00000448979 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.16
AC023509.3-201ENST00000448979 SOGA1O94964 1423 aa22.25■■□□□ 1.15
AC023509.3-201ENST00000448979 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
AC023509.3-201ENST00000448979 CHD1O14646 1710 aa22.19■■□□□ 1.14
AC023509.3-201ENST00000448979 FBLN2P98095 1184 aa22.15■■□□□ 1.14
AC023509.3-201ENST00000448979 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
AC023509.3-201ENST00000448979 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
AC023509.3-201ENST00000448979 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
AC023509.3-201ENST00000448979 SNAPC4Q5SXM2 1469 aa22.08■■□□□ 1.13
AC023509.3-201ENST00000448979 WDR97A6NE52 1622 aa22.08■■□□□ 1.12
AC023509.3-201ENST00000448979 FOXD1Q16676 465 aa22.03■■□□□ 1.12
AC023509.3-201ENST00000448979 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
AC023509.3-201ENST00000448979 SYNJ1O43426 1573 aa22.02■■□□□ 1.12
AC023509.3-201ENST00000448979 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
AC023509.3-201ENST00000448979 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
AC023509.3-201ENST00000448979 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
AC023509.3-201ENST00000448979 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
AC023509.3-201ENST00000448979 ABCA10Q8WWZ4 1543 aa21.96■■□□□ 1.11
AC023509.3-201ENST00000448979 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
AC023509.3-201ENST00000448979 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
AC023509.3-201ENST00000448979 TOP2BQ02880 1626 aa21.95■■□□□ 1.1
AC023509.3-201ENST00000448979 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
AC023509.3-201ENST00000448979 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
AC023509.3-201ENST00000448979 CYB5RLQ6IPT4 315 aa21.9■■□□□ 1.1
AC023509.3-201ENST00000448979 SYNJ2O15056 1496 aa21.88■■□□□ 1.09
AC023509.3-201ENST00000448979 CLASP1Q7Z460 1538 aa21.87■■□□□ 1.09
AC023509.3-201ENST00000448979 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
AC023509.3-201ENST00000448979 ADAMTS12P58397 1594 aa21.77■■□□□ 1.07
AC023509.3-201ENST00000448979 GRIN2AQ12879 1464 aa21.73■■□□□ 1.07
AC023509.3-201ENST00000448979 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
AC023509.3-201ENST00000448979 ERCC6L2Q5T890 1561 aa21.69■■□□□ 1.06
AC023509.3-201ENST00000448979 FHAD1B1AJZ9 1412 aa21.66■■□□□ 1.06
AC023509.3-201ENST00000448979 ERICH3Q5RHP9 1530 aa21.66■■□□□ 1.06
AC023509.3-201ENST00000448979 NUP160Q12769 1436 aa21.63■■□□□ 1.05
AC023509.3-201ENST00000448979 TRHP20396 242 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms