RNA–Protein interactions for RNA: ENST00000448948.1

AC003035.2-201, humanhuman

TSL 3 BASIC

Gene AC003035.2, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003035.2-201ENST00000448948 NISCHQ9Y2I1 1504 aa17.94■□□□□ 0.46
AC003035.2-201ENST00000448948 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
AC003035.2-201ENST00000448948 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
AC003035.2-201ENST00000448948 ABCC9O60706 1549 aa16.24■□□□□ 0.19
AC003035.2-201ENST00000448948 CCDC180Q9P1Z9 1646 aa16.14■□□□□ 0.17
AC003035.2-201ENST00000448948 RB1CC1Q8TDY2 1594 aa15.44■□□□□ 0.06
AC003035.2-201ENST00000448948 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
AC003035.2-201ENST00000448948 NACADO15069 1562 aa15.32■□□□□ 0.04
AC003035.2-201ENST00000448948 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
AC003035.2-201ENST00000448948 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
AC003035.2-201ENST00000448948 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
AC003035.2-201ENST00000448948 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
AC003035.2-201ENST00000448948 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
AC003035.2-201ENST00000448948 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
AC003035.2-201ENST00000448948 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
AC003035.2-201ENST00000448948 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
AC003035.2-201ENST00000448948 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
AC003035.2-201ENST00000448948 SHROOM4Q9ULL8 1493 aa14.83□□□□□ -0.03
AC003035.2-201ENST00000448948 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
AC003035.2-201ENST00000448948 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
AC003035.2-201ENST00000448948 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
AC003035.2-201ENST00000448948 SCRIBQ14160 1630 aa14.64□□□□□ -0.07
AC003035.2-201ENST00000448948 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
AC003035.2-201ENST00000448948 FOXD1Q16676 465 aa14.39□□□□□ -0.11
AC003035.2-201ENST00000448948 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
AC003035.2-201ENST00000448948 NCAPD3P42695 1498 aa14.18□□□□□ -0.14
AC003035.2-201ENST00000448948 CUX2O14529 1486 aa14.11□□□□□ -0.15
AC003035.2-201ENST00000448948 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
AC003035.2-201ENST00000448948 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
AC003035.2-201ENST00000448948 SMARCA2P51531 1590 aa14.03□□□□□ -0.16
AC003035.2-201ENST00000448948 HMGXB3Q12766 1538 aa14.01□□□□□ -0.17
AC003035.2-201ENST00000448948 SMARCA4P51532 1647 aa13.99□□□□□ -0.17
AC003035.2-201ENST00000448948 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
AC003035.2-201ENST00000448948 NESP48681 1621 aa13.91□□□□□ -0.18
AC003035.2-201ENST00000448948 BAZ1BQ9UIG0 1483 aaKnown RBP13.91□□□□□ -0.18
AC003035.2-201ENST00000448948 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
AC003035.2-201ENST00000448948 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.19
AC003035.2-201ENST00000448948 THOC2Q8NI27 1593 aaKnown RBP13.8□□□□□ -0.2
AC003035.2-201ENST00000448948 MROH2BQ7Z745 1585 aa13.79□□□□□ -0.2
AC003035.2-201ENST00000448948 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
AC003035.2-201ENST00000448948 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
AC003035.2-201ENST00000448948 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
AC003035.2-201ENST00000448948 MSH5O43196 834 aa13.7□□□□□ -0.22
AC003035.2-201ENST00000448948 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
AC003035.2-201ENST00000448948 WDR62O43379 1518 aa13.61□□□□□ -0.23
AC003035.2-201ENST00000448948 WIZO95785 1651 aa13.59□□□□□ -0.23
AC003035.2-201ENST00000448948 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
AC003035.2-201ENST00000448948 CFTRP13569 1480 aa13.54□□□□□ -0.24
AC003035.2-201ENST00000448948 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
AC003035.2-201ENST00000448948 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
AC003035.2-201ENST00000448948 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
AC003035.2-201ENST00000448948 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
AC003035.2-201ENST00000448948 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
AC003035.2-201ENST00000448948 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
AC003035.2-201ENST00000448948 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
AC003035.2-201ENST00000448948 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
AC003035.2-201ENST00000448948 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
AC003035.2-201ENST00000448948 IFT140Q96RY7 1462 aa13.3□□□□□ -0.28
AC003035.2-201ENST00000448948 ZNF608Q9ULD9 1512 aaPredicted RBP13.27□□□□□ -0.29
AC003035.2-201ENST00000448948 ABCC8Q09428 1581 aa13.27□□□□□ -0.29
AC003035.2-201ENST00000448948 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
AC003035.2-201ENST00000448948 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
AC003035.2-201ENST00000448948 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
AC003035.2-201ENST00000448948 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
AC003035.2-201ENST00000448948 ARHGEF11O15085 1522 aa13.19□□□□□ -0.3
AC003035.2-201ENST00000448948 DNMBPQ6XZF7 1577 aa13.19□□□□□ -0.3
AC003035.2-201ENST00000448948 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
AC003035.2-201ENST00000448948 TARBP1Q13395 1621 aaKnown RBP13.15□□□□□ -0.3
AC003035.2-201ENST00000448948 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC003035.2-201ENST00000448948 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
AC003035.2-201ENST00000448948 PIAS4Q8N2W9 510 aaPredicted RBP13.12□□□□□ -0.31
AC003035.2-201ENST00000448948 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
AC003035.2-201ENST00000448948 SOGA1O94964 1423 aa13.07□□□□□ -0.32
AC003035.2-201ENST00000448948 FBLN2P98095 1184 aa13.07□□□□□ -0.32
AC003035.2-201ENST00000448948 CHD1O14646 1710 aa13.07□□□□□ -0.32
AC003035.2-201ENST00000448948 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
AC003035.2-201ENST00000448948 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
AC003035.2-201ENST00000448948 TDRD9Q8NDG6 1382 aaKnown RBP13.05□□□□□ -0.32
AC003035.2-201ENST00000448948 WDR97A6NE52 1622 aa13.04□□□□□ -0.32
AC003035.2-201ENST00000448948 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
AC003035.2-201ENST00000448948 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
AC003035.2-201ENST00000448948 SNAPC4Q5SXM2 1469 aa12.98□□□□□ -0.33
AC003035.2-201ENST00000448948 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
AC003035.2-201ENST00000448948 CHMP7Q8WUX9 453 aaPredicted RBP12.98□□□□□ -0.33
AC003035.2-201ENST00000448948 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
AC003035.2-201ENST00000448948 CUX1P39880 1505 aa12.97□□□□□ -0.33
AC003035.2-201ENST00000448948 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
AC003035.2-201ENST00000448948 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
AC003035.2-201ENST00000448948 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
AC003035.2-201ENST00000448948 GAPVD1Q14C86 1478 aa12.9□□□□□ -0.34
AC003035.2-201ENST00000448948 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
AC003035.2-201ENST00000448948 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
AC003035.2-201ENST00000448948 PBRM1Q86U86 1689 aa12.84□□□□□ -0.35
AC003035.2-201ENST00000448948 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
AC003035.2-201ENST00000448948 WRNQ14191 1432 aaPredicted RBP eCLIP12.8□□□□□ -0.36
AC003035.2-201ENST00000448948 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
AC003035.2-201ENST00000448948 NUP160Q12769 1436 aa12.78□□□□□ -0.36
AC003035.2-201ENST00000448948 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
AC003035.2-201ENST00000448948 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
AC003035.2-201ENST00000448948 TOP2BQ02880 1626 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms