RNA–Protein interactions for RNA: ENST00000448892.1

LINC00884-202, long intergenic non-protein coding RNA 884, humanhuman

TSL 5 BASIC

Gene LINC00884, Length 2,680 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00884-202ENST00000448892 NISCHQ9Y2I1 1504 aa29.5■■■□□ 2.31
LINC00884-202ENST00000448892 HRCP23327 699 aa26.69■■□□□ 1.86
LINC00884-202ENST00000448892 SHROOM4Q9ULL8 1493 aa26.27■■□□□ 1.8
LINC00884-202ENST00000448892 PPARGC1BQ86YN6 1023 aaKnown RBP26.21■■□□□ 1.79
LINC00884-202ENST00000448892 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
LINC00884-202ENST00000448892 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.77
LINC00884-202ENST00000448892 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
LINC00884-202ENST00000448892 CHIC1Q5VXU3 224 aa25.81■■□□□ 1.72
LINC00884-202ENST00000448892 PELP1Q8IZL8 1130 aaKnown RBP25.75■■□□□ 1.71
LINC00884-202ENST00000448892 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
LINC00884-202ENST00000448892 SCAF1Q9H7N4 1312 aaKnown RBP25.32■■□□□ 1.64
LINC00884-202ENST00000448892 LOC105371045A0A1W2PR82 267 aa25.26■■□□□ 1.63
LINC00884-202ENST00000448892 TRIM26Q12899 539 aaPredicted RBP25.22■■□□□ 1.63
LINC00884-202ENST00000448892 CCDC180Q9P1Z9 1646 aa25.13■■□□□ 1.61
LINC00884-202ENST00000448892 ZCCHC6Q5VYS8 1495 aaKnown RBP25.12■■□□□ 1.61
LINC00884-202ENST00000448892 ZEB1P37275 1124 aaPredicted RBP24.99■■□□□ 1.59
LINC00884-202ENST00000448892 MYT1Q01538 1121 aa24.72■■□□□ 1.55
LINC00884-202ENST00000448892 ACIN1Q9UKV3 1341 aaKnown RBP24.64■■□□□ 1.54
LINC00884-202ENST00000448892 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
LINC00884-202ENST00000448892 NEUROD1Q13562 356 aa24.61■■□□□ 1.53
LINC00884-202ENST00000448892 GTF3C3Q9Y5Q9 886 aa24.47■■□□□ 1.51
LINC00884-202ENST00000448892 CENPBP07199 599 aaPredicted RBP24.27■■□□□ 1.48
LINC00884-202ENST00000448892 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
LINC00884-202ENST00000448892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.2■■□□□ 1.47
LINC00884-202ENST00000448892 DIEXFQ68CQ4 756 aaKnown RBP24.19■■□□□ 1.46
LINC00884-202ENST00000448892 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
LINC00884-202ENST00000448892 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
LINC00884-202ENST00000448892 CCER1Q8TC90 406 aaPredicted RBP24.12■■□□□ 1.45
LINC00884-202ENST00000448892 ABCC9O60706 1549 aa23.89■■□□□ 1.41
LINC00884-202ENST00000448892 YTHDC1Q96MU7 727 aaKnown RBP23.83■■□□□ 1.41
LINC00884-202ENST00000448892 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
LINC00884-202ENST00000448892 RB1CC1Q8TDY2 1594 aa23.76■■□□□ 1.39
LINC00884-202ENST00000448892 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
LINC00884-202ENST00000448892 TTBK1Q5TCY1 1321 aaPredicted RBP23.62■■□□□ 1.37
LINC00884-202ENST00000448892 MIER1Q8N108 512 aa23.59■■□□□ 1.37
LINC00884-202ENST00000448892 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
LINC00884-202ENST00000448892 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
LINC00884-202ENST00000448892 BCL11AQ9H165 835 aa23.27■■□□□ 1.32
LINC00884-202ENST00000448892 SUPT16HQ9Y5B9 1047 aaKnown RBP23.26■■□□□ 1.31
LINC00884-202ENST00000448892 ANP32EQ9BTT0 268 aa23.25■■□□□ 1.31
LINC00884-202ENST00000448892 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
LINC00884-202ENST00000448892 TSHZ2Q9NRE2 1034 aa23.19■■□□□ 1.3
LINC00884-202ENST00000448892 CECR2Q9BXF3 1484 aa23.13■■□□□ 1.29
LINC00884-202ENST00000448892 CLSPNQ9HAW4 1339 aa23.11■■□□□ 1.29
LINC00884-202ENST00000448892 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
LINC00884-202ENST00000448892 HNRNPUL2Q1KMD3 747 aaKnown RBP23.1■■□□□ 1.29
LINC00884-202ENST00000448892 WIZO95785 1651 aa23.05■■□□□ 1.28
LINC00884-202ENST00000448892 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
LINC00884-202ENST00000448892 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
LINC00884-202ENST00000448892 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
LINC00884-202ENST00000448892 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
LINC00884-202ENST00000448892 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
LINC00884-202ENST00000448892 UBTFP17480 764 aaKnown RBP22.94■■□□□ 1.26
LINC00884-202ENST00000448892 SOGA1O94964 1423 aa22.94■■□□□ 1.26
LINC00884-202ENST00000448892 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.24
LINC00884-202ENST00000448892 RUSC2Q8N2Y8 1516 aa22.82■■□□□ 1.24
LINC00884-202ENST00000448892 BCANQ96GW7 911 aa22.78■■□□□ 1.24
LINC00884-202ENST00000448892 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
LINC00884-202ENST00000448892 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
LINC00884-202ENST00000448892 EEA1Q15075 1411 aa22.7■■□□□ 1.22
LINC00884-202ENST00000448892 NACADO15069 1562 aa22.66■■□□□ 1.22
LINC00884-202ENST00000448892 DHX57Q6P158 1386 aaKnown RBP22.64■■□□□ 1.21
LINC00884-202ENST00000448892 FKBP8Q14318 412 aa22.64■■□□□ 1.21
LINC00884-202ENST00000448892 RBM19Q9Y4C8 960 aaKnown RBP22.64■■□□□ 1.21
LINC00884-202ENST00000448892 CLIP1P30622 1438 aa22.57■■□□□ 1.2
LINC00884-202ENST00000448892 APLP2Q06481 763 aa22.56■■□□□ 1.2
LINC00884-202ENST00000448892 VPS8Q8N3P4 1428 aa22.55■■□□□ 1.2
LINC00884-202ENST00000448892 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
LINC00884-202ENST00000448892 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
LINC00884-202ENST00000448892 MSH5O43196 834 aa22.47■■□□□ 1.19
LINC00884-202ENST00000448892 CEP164Q9UPV0 1460 aa22.46■■□□□ 1.19
LINC00884-202ENST00000448892 ITGAEP38570 1179 aa22.45■■□□□ 1.18
LINC00884-202ENST00000448892 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
LINC00884-202ENST00000448892 KIF21BO75037 1637 aa22.39■■□□□ 1.17
LINC00884-202ENST00000448892 NEFLP07196 543 aa22.38■■□□□ 1.17
LINC00884-202ENST00000448892 PRKCSHP14314 528 aaPredicted RBP22.3■■□□□ 1.16
LINC00884-202ENST00000448892 DDX10Q13206 875 aaKnown RBP22.3■■□□□ 1.16
LINC00884-202ENST00000448892 RAPGEF2Q9Y4G8 1499 aa22.29■■□□□ 1.16
LINC00884-202ENST00000448892 TRIM52Q96A61 297 aa22.28■■□□□ 1.16
LINC00884-202ENST00000448892 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
LINC00884-202ENST00000448892 KANK4Q5T7N3 995 aaPredicted RBP22.25■■□□□ 1.15
LINC00884-202ENST00000448892 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
LINC00884-202ENST00000448892 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
LINC00884-202ENST00000448892 FANCIQ9NVI1 1328 aa22.2■■□□□ 1.14
LINC00884-202ENST00000448892 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
LINC00884-202ENST00000448892 RRBP1Q9P2E9 1410 aaKnown RBP22.15■■□□□ 1.14
LINC00884-202ENST00000448892 CUX2O14529 1486 aa22.15■■□□□ 1.14
LINC00884-202ENST00000448892 PPP1R15AO75807 674 aaPredicted RBP22.14■■□□□ 1.13
LINC00884-202ENST00000448892 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
LINC00884-202ENST00000448892 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
LINC00884-202ENST00000448892 HIRIP3Q9BW71 556 aaPredicted RBP22.08■■□□□ 1.13
LINC00884-202ENST00000448892 ARAP1Q96P48 1450 aa22.08■■□□□ 1.13
LINC00884-202ENST00000448892 CCER2I3L3R5 266 aa22.07■■□□□ 1.12
LINC00884-202ENST00000448892 CDK11AQ9UQ88 783 aaPredicted RBP22.07■■□□□ 1.12
LINC00884-202ENST00000448892 CCNB3Q8WWL7 1395 aa22.06■■□□□ 1.12
LINC00884-202ENST00000448892 RAB3GAP2Q9H2M9 1393 aa22.06■■□□□ 1.12
LINC00884-202ENST00000448892 IRX6P78412 446 aaPredicted RBP22.05■■□□□ 1.12
LINC00884-202ENST00000448892 DEKP35659 375 aaKnown RBP22.05■■□□□ 1.12
LINC00884-202ENST00000448892 ANP32CO43423 234 aa22.03■■□□□ 1.12
LINC00884-202ENST00000448892 SIN3AQ96ST3 1273 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms