RNA–Protein interactions for RNA: ENST00000448480.1

CASP10-208, Transcript of caspase 10, humanhuman

TSL 1 (best) BASIC

Gene CASP10, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP10-208ENST00000448480 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
CASP10-208ENST00000448480 CCDC180Q9P1Z9 1646 aa14.3□□□□□ -0.12
CASP10-208ENST00000448480 ABCC9O60706 1549 aa13.82□□□□□ -0.2
CASP10-208ENST00000448480 DCAF8L2P0C7V8 631 aa13.64□□□□□ -0.23
CASP10-208ENST00000448480 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
CASP10-208ENST00000448480 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
CASP10-208ENST00000448480 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
CASP10-208ENST00000448480 MYO15BQ96JP2 1530 aa13.47□□□□□ -0.25
CASP10-208ENST00000448480 NACADO15069 1562 aa13.47□□□□□ -0.25
CASP10-208ENST00000448480 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
CASP10-208ENST00000448480 CHIC1Q5VXU3 224 aa13.28□□□□□ -0.28
CASP10-208ENST00000448480 SCRIBQ14160 1630 aa13.06□□□□□ -0.32
CASP10-208ENST00000448480 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
CASP10-208ENST00000448480 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
CASP10-208ENST00000448480 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
CASP10-208ENST00000448480 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
CASP10-208ENST00000448480 DNAJC5BQ9UF47 199 aa12.82□□□□□ -0.36
CASP10-208ENST00000448480 BAZ1AQ9NRL2 1556 aaPredicted RBP12.61□□□□□ -0.39
CASP10-208ENST00000448480 EIF4G1Q04637 1599 aaKnown RBP12.59□□□□□ -0.39
CASP10-208ENST00000448480 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
CASP10-208ENST00000448480 SMARCA4P51532 1647 aa12.52□□□□□ -0.41
CASP10-208ENST00000448480 MROH2BQ7Z745 1585 aa12.48□□□□□ -0.41
CASP10-208ENST00000448480 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
CASP10-208ENST00000448480 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
CASP10-208ENST00000448480 CC2D2AQ9P2K1 1620 aa12.46□□□□□ -0.41
CASP10-208ENST00000448480 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
CASP10-208ENST00000448480 SUPT5HO00267 1087 aaKnown RBP12.44□□□□□ -0.42
CASP10-208ENST00000448480 NCAPD3P42695 1498 aa12.43□□□□□ -0.42
CASP10-208ENST00000448480 PEG3Q9GZU2 1588 aa12.4□□□□□ -0.42
CASP10-208ENST00000448480 BAZ1BQ9UIG0 1483 aaKnown RBP12.39□□□□□ -0.43
CASP10-208ENST00000448480 HMGXB3Q12766 1538 aa12.35□□□□□ -0.43
CASP10-208ENST00000448480 WIZO95785 1651 aa12.33□□□□□ -0.44
CASP10-208ENST00000448480 TOP2AP11388 1531 aaKnown RBP12.28□□□□□ -0.44
CASP10-208ENST00000448480 CCDC88BA6NC98 1476 aa12.15□□□□□ -0.46
CASP10-208ENST00000448480 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
CASP10-208ENST00000448480 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
CASP10-208ENST00000448480 PDS5BQ9NTI5 1447 aa12.05□□□□□ -0.48
CASP10-208ENST00000448480 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
CASP10-208ENST00000448480 CFTRP13569 1480 aa12.05□□□□□ -0.48
CASP10-208ENST00000448480 ERCC6Q03468 1493 aa11.98□□□□□ -0.49
CASP10-208ENST00000448480 NESP48681 1621 aa11.97□□□□□ -0.49
CASP10-208ENST00000448480 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
CASP10-208ENST00000448480 CEP164Q9UPV0 1460 aa11.92□□□□□ -0.5
CASP10-208ENST00000448480 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
CASP10-208ENST00000448480 PRDM2Q13029 1718 aa11.84□□□□□ -0.51
CASP10-208ENST00000448480 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
CASP10-208ENST00000448480 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
CASP10-208ENST00000448480 TRIM41Q8WV44 630 aa11.79□□□□□ -0.52
CASP10-208ENST00000448480 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
CASP10-208ENST00000448480 DNMBPQ6XZF7 1577 aa11.75□□□□□ -0.53
CASP10-208ENST00000448480 TOPBP1Q92547 1522 aa11.74□□□□□ -0.53
CASP10-208ENST00000448480 WDR62O43379 1518 aa11.74□□□□□ -0.53
CASP10-208ENST00000448480 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
CASP10-208ENST00000448480 CUX2O14529 1486 aa11.73□□□□□ -0.53
CASP10-208ENST00000448480 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
CASP10-208ENST00000448480 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
CASP10-208ENST00000448480 CUX1P39880 1505 aa11.7□□□□□ -0.54
CASP10-208ENST00000448480 SENP3Q9H4L4 574 aaPredicted RBP11.69□□□□□ -0.54
CASP10-208ENST00000448480 SOGA1O94964 1423 aa11.69□□□□□ -0.54
CASP10-208ENST00000448480 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
CASP10-208ENST00000448480 IFT140Q96RY7 1462 aa11.67□□□□□ -0.54
CASP10-208ENST00000448480 FGD5Q6ZNL6 1462 aa11.67□□□□□ -0.54
CASP10-208ENST00000448480 POLA1P09884 1462 aaPredicted RBP11.66□□□□□ -0.54
CASP10-208ENST00000448480 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
CASP10-208ENST00000448480 SYNJ1O43426 1573 aa11.64□□□□□ -0.55
CASP10-208ENST00000448480 RAD54L2Q9Y4B4 1467 aa11.59□□□□□ -0.55
CASP10-208ENST00000448480 ABCA10Q8WWZ4 1543 aa11.58□□□□□ -0.55
CASP10-208ENST00000448480 KIF27Q86VH2 1401 aa11.58□□□□□ -0.56
CASP10-208ENST00000448480 PHF23Q9BUL5 403 aaPredicted RBP11.58□□□□□ -0.56
CASP10-208ENST00000448480 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
CASP10-208ENST00000448480 WDR97A6NE52 1622 aa11.56□□□□□ -0.56
CASP10-208ENST00000448480 EEA1Q15075 1411 aa11.55□□□□□ -0.56
CASP10-208ENST00000448480 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
CASP10-208ENST00000448480 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
CASP10-208ENST00000448480 AQRO60306 1485 aaKnown RBP eCLIP11.52□□□□□ -0.577e-14■■■■■ 33.4
CASP10-208ENST00000448480 GRIN2BQ13224 1484 aa11.51□□□□□ -0.57
CASP10-208ENST00000448480 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
CASP10-208ENST00000448480 ZNF608Q9ULD9 1512 aaPredicted RBP11.5□□□□□ -0.57
CASP10-208ENST00000448480 FAM9AQ8IZU1 332 aaPredicted RBP11.48□□□□□ -0.57
CASP10-208ENST00000448480 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
CASP10-208ENST00000448480 ERICH3Q5RHP9 1530 aa11.46□□□□□ -0.57
CASP10-208ENST00000448480 IGF1RP08069 1367 aa11.46□□□□□ -0.58
CASP10-208ENST00000448480 FBLN2P98095 1184 aa11.46□□□□□ -0.58
CASP10-208ENST00000448480 EIF4G3O43432 1585 aaKnown RBP11.45□□□□□ -0.58
CASP10-208ENST00000448480 MAGI1Q96QZ7 1491 aaPredicted RBP11.45□□□□□ -0.58
CASP10-208ENST00000448480 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
CASP10-208ENST00000448480 CARMIL1Q5VZK9 1371 aa11.44□□□□□ -0.58
CASP10-208ENST00000448480 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
CASP10-208ENST00000448480 SNAPC4Q5SXM2 1469 aa11.41□□□□□ -0.58
CASP10-208ENST00000448480 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.58
CASP10-208ENST00000448480 SYNJ2O15056 1496 aa11.39□□□□□ -0.59
CASP10-208ENST00000448480 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
CASP10-208ENST00000448480 RAPGEF2Q9Y4G8 1499 aa11.37□□□□□ -0.59
CASP10-208ENST00000448480 CUL7Q14999 1698 aa11.37□□□□□ -0.59
CASP10-208ENST00000448480 PBRM1Q86U86 1689 aa11.37□□□□□ -0.59
CASP10-208ENST00000448480 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
CASP10-208ENST00000448480 PRXQ9BXM0 1461 aa11.34□□□□□ -0.59
CASP10-208ENST00000448480 ADAMTS12P58397 1594 aa11.33□□□□□ -0.6
CASP10-208ENST00000448480 GRIN2AQ12879 1464 aa11.32□□□□□ -0.6
CASP10-208ENST00000448480 GOLGA3Q08378 1498 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms