RNA–Protein interactions for RNA: ENST00000448226.6

MITF-209, Transcript of melanogenesis associated transcription factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MITF, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MITF-209ENST00000448226 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
MITF-209ENST00000448226 CCDC180Q9P1Z9 1646 aa17.09■□□□□ 0.33
MITF-209ENST00000448226 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
MITF-209ENST00000448226 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
MITF-209ENST00000448226 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
MITF-209ENST00000448226 ABCC9O60706 1549 aa16.54■□□□□ 0.24
MITF-209ENST00000448226 HRCP23327 699 aa16.52■□□□□ 0.23
MITF-209ENST00000448226 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
MITF-209ENST00000448226 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
MITF-209ENST00000448226 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
MITF-209ENST00000448226 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
MITF-209ENST00000448226 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
MITF-209ENST00000448226 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
MITF-209ENST00000448226 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
MITF-209ENST00000448226 NACADO15069 1562 aa15.92■□□□□ 0.14
MITF-209ENST00000448226 PPARGC1BQ86YN6 1023 aaKnown RBP15.92■□□□□ 0.14
MITF-209ENST00000448226 RB1CC1Q8TDY2 1594 aa15.82■□□□□ 0.12
MITF-209ENST00000448226 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
MITF-209ENST00000448226 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
MITF-209ENST00000448226 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
MITF-209ENST00000448226 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
MITF-209ENST00000448226 ZEB1P37275 1124 aaPredicted RBP15.72■□□□□ 0.11
MITF-209ENST00000448226 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
MITF-209ENST00000448226 MROH2BQ7Z745 1585 aa15.57■□□□□ 0.08
MITF-209ENST00000448226 LOC105371045A0A1W2PR82 267 aa15.56■□□□□ 0.08
MITF-209ENST00000448226 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
MITF-209ENST00000448226 WIZO95785 1651 aa15.49■□□□□ 0.07
MITF-209ENST00000448226 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
MITF-209ENST00000448226 MYT1Q01538 1121 aa15.44■□□□□ 0.06
MITF-209ENST00000448226 SMARCA4P51532 1647 aa15.31■□□□□ 0.04
MITF-209ENST00000448226 BAZ1AQ9NRL2 1556 aaPredicted RBP15.3■□□□□ 0.04
MITF-209ENST00000448226 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.03
MITF-209ENST00000448226 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
MITF-209ENST00000448226 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
MITF-209ENST00000448226 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
MITF-209ENST00000448226 CENPBP07199 599 aaPredicted RBP15.1■□□□□ 0.01
MITF-209ENST00000448226 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
MITF-209ENST00000448226 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
MITF-209ENST00000448226 NEUROD1Q13562 356 aa15.08■□□□□ 0
MITF-209ENST00000448226 SMARCA2P51531 1590 aa15.05■□□□□ 0
MITF-209ENST00000448226 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
MITF-209ENST00000448226 EIF4G1Q04637 1599 aaKnown RBP15.02□□□□□ -0.01
MITF-209ENST00000448226 ABCC8Q09428 1581 aa15□□□□□ -0.01
MITF-209ENST00000448226 GTF3C3Q9Y5Q9 886 aa14.99□□□□□ -0.01
MITF-209ENST00000448226 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
MITF-209ENST00000448226 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
MITF-209ENST00000448226 CCER1Q8TC90 406 aaPredicted RBP14.94□□□□□ -0.02
MITF-209ENST00000448226 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
MITF-209ENST00000448226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
MITF-209ENST00000448226 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
MITF-209ENST00000448226 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
MITF-209ENST00000448226 CC2D2AQ9P2K1 1620 aa14.82□□□□□ -0.04
MITF-209ENST00000448226 NCAPD3P42695 1498 aa14.77□□□□□ -0.05
MITF-209ENST00000448226 ZNF316A6NFI3 1004 aaPredicted RBP14.75□□□□□ -0.05
MITF-209ENST00000448226 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
MITF-209ENST00000448226 SOGA1O94964 1423 aa14.72□□□□□ -0.05
MITF-209ENST00000448226 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
MITF-209ENST00000448226 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
MITF-209ENST00000448226 CLSPNQ9HAW4 1339 aa14.63□□□□□ -0.07
MITF-209ENST00000448226 CEP162Q5TB80 1403 aa14.62□□□□□ -0.07
MITF-209ENST00000448226 TNIKQ9UKE5 1360 aa14.62□□□□□ -0.07
MITF-209ENST00000448226 NESP48681 1621 aa14.6□□□□□ -0.07
MITF-209ENST00000448226 EEA1Q15075 1411 aa14.58□□□□□ -0.08
MITF-209ENST00000448226 CFTRP13569 1480 aa14.54□□□□□ -0.08
MITF-209ENST00000448226 MIER1Q8N108 512 aa14.54□□□□□ -0.08
MITF-209ENST00000448226 RANGAP1P46060 587 aaPredicted RBP14.53□□□□□ -0.08
MITF-209ENST00000448226 YTHDC1Q96MU7 727 aaKnown RBP14.52□□□□□ -0.08
MITF-209ENST00000448226 CUX1P39880 1505 aa14.5□□□□□ -0.09
MITF-209ENST00000448226 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
MITF-209ENST00000448226 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
MITF-209ENST00000448226 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
MITF-209ENST00000448226 UBTFP17480 764 aaKnown RBP14.45□□□□□ -0.1
MITF-209ENST00000448226 TOP2BQ02880 1626 aa14.45□□□□□ -0.1
MITF-209ENST00000448226 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
MITF-209ENST00000448226 FANCD2Q9BXW9 1451 aa14.39□□□□□ -0.11
MITF-209ENST00000448226 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
MITF-209ENST00000448226 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
MITF-209ENST00000448226 RAPGEF2Q9Y4G8 1499 aa14.36□□□□□ -0.11
MITF-209ENST00000448226 SUPT16HQ9Y5B9 1047 aaKnown RBP14.35□□□□□ -0.11
MITF-209ENST00000448226 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
MITF-209ENST00000448226 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
MITF-209ENST00000448226 ANP32EQ9BTT0 268 aa14.31□□□□□ -0.12
MITF-209ENST00000448226 KIF21BO75037 1637 aa14.3□□□□□ -0.12
MITF-209ENST00000448226 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
MITF-209ENST00000448226 KIF21AQ7Z4S6 1674 aa14.29□□□□□ -0.12
MITF-209ENST00000448226 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
MITF-209ENST00000448226 HNRNPUL2Q1KMD3 747 aaKnown RBP14.28□□□□□ -0.12
MITF-209ENST00000448226 CUX2O14529 1486 aa14.28□□□□□ -0.12
MITF-209ENST00000448226 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
MITF-209ENST00000448226 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
MITF-209ENST00000448226 CLIP1P30622 1438 aa14.25□□□□□ -0.13
MITF-209ENST00000448226 TOPBP1Q92547 1522 aa14.24□□□□□ -0.13
MITF-209ENST00000448226 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
MITF-209ENST00000448226 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
MITF-209ENST00000448226 KIF27Q86VH2 1401 aa14.21□□□□□ -0.14
MITF-209ENST00000448226 APLP2Q06481 763 aa14.2□□□□□ -0.14
MITF-209ENST00000448226 DHX57Q6P158 1386 aaKnown RBP14.19□□□□□ -0.14
MITF-209ENST00000448226 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
MITF-209ENST00000448226 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
MITF-209ENST00000448226 IGF1RP08069 1367 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms