RNA–Protein interactions for RNA: ENST00000448105.6

CALCOCO2-204, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-204ENST00000448105 NISCHQ9Y2I1 1504 aa14.54□□□□□ -0.08
CALCOCO2-204ENST00000448105 ABCC9O60706 1549 aa13.4□□□□□ -0.27
CALCOCO2-204ENST00000448105 CCDC180Q9P1Z9 1646 aa13.07□□□□□ -0.32
CALCOCO2-204ENST00000448105 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
CALCOCO2-204ENST00000448105 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
CALCOCO2-204ENST00000448105 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
CALCOCO2-204ENST00000448105 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
CALCOCO2-204ENST00000448105 NACADO15069 1562 aa12.48□□□□□ -0.41
CALCOCO2-204ENST00000448105 MYO15BQ96JP2 1530 aa12.26□□□□□ -0.45
CALCOCO2-204ENST00000448105 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
CALCOCO2-204ENST00000448105 UNC13AQ9UPW8 1703 aa12.19□□□□□ -0.46
CALCOCO2-204ENST00000448105 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
CALCOCO2-204ENST00000448105 CHIC1Q5VXU3 224 aa12.07□□□□□ -0.48
CALCOCO2-204ENST00000448105 CECR2Q9BXF3 1484 aa12.06□□□□□ -0.48
CALCOCO2-204ENST00000448105 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
CALCOCO2-204ENST00000448105 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
CALCOCO2-204ENST00000448105 SCRIBQ14160 1630 aa11.98□□□□□ -0.49
CALCOCO2-204ENST00000448105 ZCCHC6Q5VYS8 1495 aaKnown RBP11.98□□□□□ -0.49
CALCOCO2-204ENST00000448105 DCAF1Q9Y4B6 1507 aa11.96□□□□□ -0.49
CALCOCO2-204ENST00000448105 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
CALCOCO2-204ENST00000448105 AEBP2Q6ZN18 517 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-204ENST00000448105 CUX2O14529 1486 aa11.71□□□□□ -0.53
CALCOCO2-204ENST00000448105 ERCC6Q03468 1493 aa11.59□□□□□ -0.55
CALCOCO2-204ENST00000448105 NCAPD3P42695 1498 aa11.52□□□□□ -0.57
CALCOCO2-204ENST00000448105 ATAD2BQ9ULI0 1458 aa11.46□□□□□ -0.57
CALCOCO2-204ENST00000448105 NESP48681 1621 aa11.45□□□□□ -0.58
CALCOCO2-204ENST00000448105 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
CALCOCO2-204ENST00000448105 HMGXB3Q12766 1538 aa11.37□□□□□ -0.59
CALCOCO2-204ENST00000448105 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
CALCOCO2-204ENST00000448105 BAZ1BQ9UIG0 1483 aaKnown RBP11.34□□□□□ -0.59
CALCOCO2-204ENST00000448105 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
CALCOCO2-204ENST00000448105 PDS5BQ9NTI5 1447 aa11.32□□□□□ -0.6
CALCOCO2-204ENST00000448105 LAMC3Q9Y6N6 1575 aa11.29□□□□□ -0.6
CALCOCO2-204ENST00000448105 BAZ1AQ9NRL2 1556 aaPredicted RBP11.26□□□□□ -0.61
CALCOCO2-204ENST00000448105 THOC2Q8NI27 1593 aaKnown RBP11.25□□□□□ -0.61
CALCOCO2-204ENST00000448105 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
CALCOCO2-204ENST00000448105 PEG3Q9GZU2 1588 aa11.19□□□□□ -0.62
CALCOCO2-204ENST00000448105 KIF21AQ7Z4S6 1674 aa11.18□□□□□ -0.62
CALCOCO2-204ENST00000448105 OSCARQ8IYS5 282 aa11.18□□□□□ -0.62
CALCOCO2-204ENST00000448105 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
CALCOCO2-204ENST00000448105 MRC2Q9UBG0 1479 aa11.15□□□□□ -0.62
CALCOCO2-204ENST00000448105 WDR62O43379 1518 aa11.08□□□□□ -0.64
CALCOCO2-204ENST00000448105 WIZO95785 1651 aa11.07□□□□□ -0.64
CALCOCO2-204ENST00000448105 CEP164Q9UPV0 1460 aa11.05□□□□□ -0.64
CALCOCO2-204ENST00000448105 FANCD2Q9BXW9 1451 aa11.04□□□□□ -0.64
CALCOCO2-204ENST00000448105 CFTRP13569 1480 aa10.98□□□□□ -0.65
CALCOCO2-204ENST00000448105 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
CALCOCO2-204ENST00000448105 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.66
CALCOCO2-204ENST00000448105 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
CALCOCO2-204ENST00000448105 CYB5RLQ6IPT4 315 aa10.89□□□□□ -0.67
CALCOCO2-204ENST00000448105 IFT140Q96RY7 1462 aa10.88□□□□□ -0.67
CALCOCO2-204ENST00000448105 TOP2AP11388 1531 aaKnown RBP10.88□□□□□ -0.67
CALCOCO2-204ENST00000448105 TRHP20396 242 aaPredicted RBP10.87□□□□□ -0.67
CALCOCO2-204ENST00000448105 RIMBP3CA6NJZ7 1639 aa10.87□□□□□ -0.67
CALCOCO2-204ENST00000448105 RIMBP3BA6NNM3 1639 aa10.87□□□□□ -0.67
CALCOCO2-204ENST00000448105 RIMBP3Q9UFD9 1639 aa10.87□□□□□ -0.67
CALCOCO2-204ENST00000448105 PHF23Q9BUL5 403 aaPredicted RBP10.86□□□□□ -0.67
CALCOCO2-204ENST00000448105 ABCC8Q09428 1581 aa10.86□□□□□ -0.67
CALCOCO2-204ENST00000448105 FBLN2P98095 1184 aa10.84□□□□□ -0.67
CALCOCO2-204ENST00000448105 CCDC88BA6NC98 1476 aa10.83□□□□□ -0.68
CALCOCO2-204ENST00000448105 ARHGEF11O15085 1522 aa10.83□□□□□ -0.68
CALCOCO2-204ENST00000448105 TOPBP1Q92547 1522 aa10.8□□□□□ -0.68
CALCOCO2-204ENST00000448105 AQRO60306 1485 aaKnown RBP eCLIP10.8□□□□□ -0.681e-6■■■■□ 26.1
CALCOCO2-204ENST00000448105 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
CALCOCO2-204ENST00000448105 TDRD9Q8NDG6 1382 aaKnown RBP10.73□□□□□ -0.69
CALCOCO2-204ENST00000448105 PRDM2Q13029 1718 aa10.73□□□□□ -0.69
CALCOCO2-204ENST00000448105 ARAP1Q96P48 1450 aa10.72□□□□□ -0.69
CALCOCO2-204ENST00000448105 RAD54L2Q9Y4B4 1467 aa10.71□□□□□ -0.69
CALCOCO2-204ENST00000448105 DNMBPQ6XZF7 1577 aa10.7□□□□□ -0.7
CALCOCO2-204ENST00000448105 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
CALCOCO2-204ENST00000448105 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
CALCOCO2-204ENST00000448105 TARBP1Q13395 1621 aaKnown RBP10.67□□□□□ -0.7
CALCOCO2-204ENST00000448105 SOGA1O94964 1423 aa10.67□□□□□ -0.7
CALCOCO2-204ENST00000448105 CHD1O14646 1710 aa10.67□□□□□ -0.7
CALCOCO2-204ENST00000448105 WDR97A6NE52 1622 aa10.64□□□□□ -0.71
CALCOCO2-204ENST00000448105 SNAPC4Q5SXM2 1469 aa10.64□□□□□ -0.71
CALCOCO2-204ENST00000448105 SYNJ1O43426 1573 aa10.61□□□□□ -0.71
CALCOCO2-204ENST00000448105 FGD5Q6ZNL6 1462 aa10.6□□□□□ -0.71
CALCOCO2-204ENST00000448105 MAGI1Q96QZ7 1491 aaPredicted RBP10.59□□□□□ -0.71
CALCOCO2-204ENST00000448105 CUX1P39880 1505 aa10.56□□□□□ -0.72
CALCOCO2-204ENST00000448105 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
CALCOCO2-204ENST00000448105 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
CALCOCO2-204ENST00000448105 SYNJ2O15056 1496 aa10.53□□□□□ -0.72
CALCOCO2-204ENST00000448105 GAPVD1Q14C86 1478 aa10.52□□□□□ -0.72
CALCOCO2-204ENST00000448105 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
CALCOCO2-204ENST00000448105 SUPT5HO00267 1087 aaKnown RBP10.49□□□□□ -0.73
CALCOCO2-204ENST00000448105 ERCC6L2Q5T890 1561 aa10.47□□□□□ -0.73
CALCOCO2-204ENST00000448105 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
CALCOCO2-204ENST00000448105 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
CALCOCO2-204ENST00000448105 GRIN2AQ12879 1464 aa10.41□□□□□ -0.74
CALCOCO2-204ENST00000448105 PBRM1Q86U86 1689 aa10.41□□□□□ -0.74
CALCOCO2-204ENST00000448105 WRNQ14191 1432 aaPredicted RBP eCLIP10.39□□□□□ -0.75
CALCOCO2-204ENST00000448105 ABCA5Q8WWZ7 1642 aa10.39□□□□□ -0.75
CALCOCO2-204ENST00000448105 CEP170Q5SW79 1584 aa10.38□□□□□ -0.75
CALCOCO2-204ENST00000448105 NUP160Q12769 1436 aa10.38□□□□□ -0.75
CALCOCO2-204ENST00000448105 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
CALCOCO2-204ENST00000448105 FHAD1B1AJZ9 1412 aa10.36□□□□□ -0.75
CALCOCO2-204ENST00000448105 FAM69CQ0P6D2 419 aa10.36□□□□□ -0.75
CALCOCO2-204ENST00000448105 PRG4Q92954 1404 aaPredicted RBP10.36□□□□□ -0.75
CALCOCO2-204ENST00000448105 ADAMTS12P58397 1594 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms