RNA–Protein interactions for RNA: ENST00000448096.1

AC006001.2-201, humanhuman

TSL 3 BASIC

Gene AC006001.2, Length 393 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.2-201ENST00000448096 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
AC006001.2-201ENST00000448096 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
AC006001.2-201ENST00000448096 ABCC9O60706 1549 aa33.76■■■■□ 3
AC006001.2-201ENST00000448096 RB1CC1Q8TDY2 1594 aa32.49■■■□□ 2.79
AC006001.2-201ENST00000448096 NACADO15069 1562 aa32.45■■■□□ 2.79
AC006001.2-201ENST00000448096 DCAF8L2P0C7V8 631 aa32.32■■■□□ 2.76
AC006001.2-201ENST00000448096 MYO15BQ96JP2 1530 aa32.28■■■□□ 2.76
AC006001.2-201ENST00000448096 ZCCHC6Q5VYS8 1495 aaKnown RBP32.24■■■□□ 2.75
AC006001.2-201ENST00000448096 DCAF1Q9Y4B6 1507 aa32.09■■■□□ 2.73
AC006001.2-201ENST00000448096 UNC13AQ9UPW8 1703 aa31.57■■■□□ 2.64
AC006001.2-201ENST00000448096 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
AC006001.2-201ENST00000448096 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
AC006001.2-201ENST00000448096 SCRIBQ14160 1630 aa31.37■■■□□ 2.61
AC006001.2-201ENST00000448096 SHROOM4Q9ULL8 1493 aa31.28■■■□□ 2.6
AC006001.2-201ENST00000448096 DNAJC5BQ9UF47 199 aa31.03■■■□□ 2.56
AC006001.2-201ENST00000448096 EIF4G1Q04637 1599 aaKnown RBP30.66■■■□□ 2.5
AC006001.2-201ENST00000448096 CC2D2AQ9P2K1 1620 aa30.52■■■□□ 2.48
AC006001.2-201ENST00000448096 CECR2Q9BXF3 1484 aa30.39■■■□□ 2.46
AC006001.2-201ENST00000448096 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
AC006001.2-201ENST00000448096 SMARCA4P51532 1647 aa30.03■■■□□ 2.4
AC006001.2-201ENST00000448096 NCAPD3P42695 1498 aa29.95■■■□□ 2.39
AC006001.2-201ENST00000448096 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
AC006001.2-201ENST00000448096 SMARCA2P51531 1590 aa29.91■■■□□ 2.38
AC006001.2-201ENST00000448096 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
AC006001.2-201ENST00000448096 MROH2BQ7Z745 1585 aa29.79■■■□□ 2.36
AC006001.2-201ENST00000448096 PEG3Q9GZU2 1588 aa29.79■■■□□ 2.36
AC006001.2-201ENST00000448096 BAZ1BQ9UIG0 1483 aaKnown RBP29.68■■■□□ 2.34
AC006001.2-201ENST00000448096 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.31
AC006001.2-201ENST00000448096 WIZO95785 1651 aa29.4■■■□□ 2.3
AC006001.2-201ENST00000448096 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.26
AC006001.2-201ENST00000448096 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
AC006001.2-201ENST00000448096 NESP48681 1621 aa29.16■■■□□ 2.26
AC006001.2-201ENST00000448096 LAMC3Q9Y6N6 1575 aa29.15■■■□□ 2.26
AC006001.2-201ENST00000448096 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
AC006001.2-201ENST00000448096 PDS5BQ9NTI5 1447 aa29.01■■■□□ 2.23
AC006001.2-201ENST00000448096 CUX2O14529 1486 aa28.92■■■□□ 2.22
AC006001.2-201ENST00000448096 CFTRP13569 1480 aa28.88■■■□□ 2.21
AC006001.2-201ENST00000448096 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
AC006001.2-201ENST00000448096 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
AC006001.2-201ENST00000448096 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.19
AC006001.2-201ENST00000448096 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
AC006001.2-201ENST00000448096 CEP164Q9UPV0 1460 aa28.71■■■□□ 2.19
AC006001.2-201ENST00000448096 MRC2Q9UBG0 1479 aa28.68■■■□□ 2.18
AC006001.2-201ENST00000448096 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
AC006001.2-201ENST00000448096 WDR62O43379 1518 aa28.58■■■□□ 2.17
AC006001.2-201ENST00000448096 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
AC006001.2-201ENST00000448096 URB2Q14146 1524 aaKnown RBP28.41■■■□□ 2.14
AC006001.2-201ENST00000448096 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
AC006001.2-201ENST00000448096 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
AC006001.2-201ENST00000448096 DNMBPQ6XZF7 1577 aa28.2■■■□□ 2.1
AC006001.2-201ENST00000448096 IFT140Q96RY7 1462 aa28.13■■■□□ 2.09
AC006001.2-201ENST00000448096 DNAJC5Q9H3Z4 198 aa28.11■■■□□ 2.09
AC006001.2-201ENST00000448096 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
AC006001.2-201ENST00000448096 CUX1P39880 1505 aa27.97■■■□□ 2.07
AC006001.2-201ENST00000448096 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
AC006001.2-201ENST00000448096 FGD5Q6ZNL6 1462 aa27.9■■■□□ 2.06
AC006001.2-201ENST00000448096 TARBP1Q13395 1621 aaKnown RBP27.9■■■□□ 2.06
AC006001.2-201ENST00000448096 SOGA1O94964 1423 aa27.89■■■□□ 2.06
AC006001.2-201ENST00000448096 RAD54L2Q9Y4B4 1467 aa27.83■■■□□ 2.04
AC006001.2-201ENST00000448096 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
AC006001.2-201ENST00000448096 WRNQ14191 1432 aaPredicted RBP eCLIP27.8■■■□□ 2.04
AC006001.2-201ENST00000448096 WDR97A6NE52 1622 aa27.77■■■□□ 2.04
AC006001.2-201ENST00000448096 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.04
AC006001.2-201ENST00000448096 TDRD9Q8NDG6 1382 aaKnown RBP27.72■■■□□ 2.03
AC006001.2-201ENST00000448096 TOP2BQ02880 1626 aa27.71■■■□□ 2.03
AC006001.2-201ENST00000448096 OSCARQ8IYS5 282 aa27.69■■■□□ 2.02
AC006001.2-201ENST00000448096 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
AC006001.2-201ENST00000448096 ABCA10Q8WWZ4 1543 aa27.67■■■□□ 2.02
AC006001.2-201ENST00000448096 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
AC006001.2-201ENST00000448096 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
AC006001.2-201ENST00000448096 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
AC006001.2-201ENST00000448096 MAGI1Q96QZ7 1491 aaPredicted RBP27.55■■■□□ 2
AC006001.2-201ENST00000448096 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
AC006001.2-201ENST00000448096 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
AC006001.2-201ENST00000448096 FBLN2P98095 1184 aa27.46■■□□□ 1.99
AC006001.2-201ENST00000448096 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
AC006001.2-201ENST00000448096 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
AC006001.2-201ENST00000448096 PBRM1Q86U86 1689 aa27.41■■□□□ 1.98
AC006001.2-201ENST00000448096 CHD1O14646 1710 aa27.41■■□□□ 1.98
AC006001.2-201ENST00000448096 ERICH3Q5RHP9 1530 aa27.33■■□□□ 1.97
AC006001.2-201ENST00000448096 FHAD1B1AJZ9 1412 aa27.27■■□□□ 1.96
AC006001.2-201ENST00000448096 ADAMTS12P58397 1594 aa27.26■■□□□ 1.96
AC006001.2-201ENST00000448096 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
AC006001.2-201ENST00000448096 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
AC006001.2-201ENST00000448096 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
AC006001.2-201ENST00000448096 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
AC006001.2-201ENST00000448096 RIMBP3CA6NJZ7 1639 aa27.17■■□□□ 1.94
AC006001.2-201ENST00000448096 RIMBP3BA6NNM3 1639 aa27.17■■□□□ 1.94
AC006001.2-201ENST00000448096 RIMBP3Q9UFD9 1639 aa27.17■■□□□ 1.94
AC006001.2-201ENST00000448096 NUP160Q12769 1436 aa27.13■■□□□ 1.93
AC006001.2-201ENST00000448096 IGF1RP08069 1367 aa27.12■■□□□ 1.93
AC006001.2-201ENST00000448096 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
AC006001.2-201ENST00000448096 CEP170Q5SW79 1584 aa27.04■■□□□ 1.92
AC006001.2-201ENST00000448096 CUL7Q14999 1698 aa27.04■■□□□ 1.92
AC006001.2-201ENST00000448096 ARAP1Q96P48 1450 aa26.98■■□□□ 1.91
AC006001.2-201ENST00000448096 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
AC006001.2-201ENST00000448096 CYB5RLQ6IPT4 315 aa26.95■■□□□ 1.9
AC006001.2-201ENST00000448096 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
AC006001.2-201ENST00000448096 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
AC006001.2-201ENST00000448096 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms