RNA–Protein interactions for RNA: ENST00000447974.5

LRTOMT-210, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-210ENST00000447974 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
LRTOMT-210ENST00000447974 CCDC180Q9P1Z9 1646 aa13.59□□□□□ -0.23
LRTOMT-210ENST00000447974 ABCC9O60706 1549 aa13.31□□□□□ -0.28
LRTOMT-210ENST00000447974 DCAF8L2P0C7V8 631 aa13.02□□□□□ -0.33
LRTOMT-210ENST00000447974 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
LRTOMT-210ENST00000447974 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
LRTOMT-210ENST00000447974 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.36
LRTOMT-210ENST00000447974 NACADO15069 1562 aa12.76□□□□□ -0.37
LRTOMT-210ENST00000447974 DCAF1Q9Y4B6 1507 aa12.68□□□□□ -0.38
LRTOMT-210ENST00000447974 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
LRTOMT-210ENST00000447974 MYT1Q01538 1121 aa12.56□□□□□ -0.4
LRTOMT-210ENST00000447974 SCRIBQ14160 1630 aa12.54□□□□□ -0.4
LRTOMT-210ENST00000447974 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRTOMT-210ENST00000447974 UNC13AQ9UPW8 1703 aa12.49□□□□□ -0.41
LRTOMT-210ENST00000447974 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
LRTOMT-210ENST00000447974 SHROOM4Q9ULL8 1493 aa12.44□□□□□ -0.42
LRTOMT-210ENST00000447974 BICRAQ9NZM4 1560 aa12.37□□□□□ -0.43
LRTOMT-210ENST00000447974 HRCP23327 699 aa12.33□□□□□ -0.43
LRTOMT-210ENST00000447974 EIF4G1Q04637 1599 aaKnown RBP12.06□□□□□ -0.48
LRTOMT-210ENST00000447974 CECR2Q9BXF3 1484 aa12.04□□□□□ -0.48
LRTOMT-210ENST00000447974 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
LRTOMT-210ENST00000447974 CC2D2AQ9P2K1 1620 aa11.99□□□□□ -0.49
LRTOMT-210ENST00000447974 SCAF1Q9H7N4 1312 aaKnown RBP11.98□□□□□ -0.49
LRTOMT-210ENST00000447974 PPARGC1BQ86YN6 1023 aaKnown RBP11.96□□□□□ -0.49
LRTOMT-210ENST00000447974 BAZ1AQ9NRL2 1556 aaPredicted RBP11.94□□□□□ -0.5
LRTOMT-210ENST00000447974 SMARCA4P51532 1647 aa11.94□□□□□ -0.5
LRTOMT-210ENST00000447974 MROH2BQ7Z745 1585 aa11.91□□□□□ -0.5
LRTOMT-210ENST00000447974 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
LRTOMT-210ENST00000447974 ATAD2BQ9ULI0 1458 aa11.84□□□□□ -0.51
LRTOMT-210ENST00000447974 SMARCA2P51531 1590 aa11.82□□□□□ -0.52
LRTOMT-210ENST00000447974 RSF1Q96T23 1441 aaPredicted RBP11.81□□□□□ -0.52
LRTOMT-210ENST00000447974 WIZO95785 1651 aa11.8□□□□□ -0.52
LRTOMT-210ENST00000447974 BAZ1BQ9UIG0 1483 aaKnown RBP11.79□□□□□ -0.52
LRTOMT-210ENST00000447974 NCAPD3P42695 1498 aa11.78□□□□□ -0.52
LRTOMT-210ENST00000447974 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
LRTOMT-210ENST00000447974 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
LRTOMT-210ENST00000447974 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
LRTOMT-210ENST00000447974 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
LRTOMT-210ENST00000447974 PRKCSHP14314 528 aaPredicted RBP11.66□□□□□ -0.54
LRTOMT-210ENST00000447974 TOP2AP11388 1531 aaKnown RBP11.65□□□□□ -0.54
LRTOMT-210ENST00000447974 BCL11AQ9H165 835 aa11.61□□□□□ -0.55
LRTOMT-210ENST00000447974 NESP48681 1621 aa11.55□□□□□ -0.56
LRTOMT-210ENST00000447974 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
LRTOMT-210ENST00000447974 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
LRTOMT-210ENST00000447974 FAM9AQ8IZU1 332 aaPredicted RBP11.5□□□□□ -0.57
LRTOMT-210ENST00000447974 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
LRTOMT-210ENST00000447974 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
LRTOMT-210ENST00000447974 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.58
LRTOMT-210ENST00000447974 CENPBP07199 599 aaPredicted RBP11.43□□□□□ -0.58
LRTOMT-210ENST00000447974 CFTRP13569 1480 aa11.42□□□□□ -0.58
LRTOMT-210ENST00000447974 PDS5BQ9NTI5 1447 aa11.41□□□□□ -0.58
LRTOMT-210ENST00000447974 NEUROD1Q13562 356 aa11.41□□□□□ -0.58
LRTOMT-210ENST00000447974 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.59
LRTOMT-210ENST00000447974 ERICH6Q7L0X2 663 aa11.38□□□□□ -0.59
LRTOMT-210ENST00000447974 KIF21AQ7Z4S6 1674 aa11.38□□□□□ -0.59
LRTOMT-210ENST00000447974 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
LRTOMT-210ENST00000447974 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
LRTOMT-210ENST00000447974 CEP164Q9UPV0 1460 aa11.35□□□□□ -0.59
LRTOMT-210ENST00000447974 APLP2Q06481 763 aa11.35□□□□□ -0.59
LRTOMT-210ENST00000447974 AEBP2Q6ZN18 517 aaPredicted RBP11.34□□□□□ -0.59
LRTOMT-210ENST00000447974 PRDM2Q13029 1718 aa11.32□□□□□ -0.6
LRTOMT-210ENST00000447974 CUX2O14529 1486 aa11.3□□□□□ -0.6
LRTOMT-210ENST00000447974 MRC2Q9UBG0 1479 aa11.28□□□□□ -0.6
LRTOMT-210ENST00000447974 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.6
LRTOMT-210ENST00000447974 URB2Q14146 1524 aaKnown RBP11.24□□□□□ -0.61
LRTOMT-210ENST00000447974 WDR62O43379 1518 aa11.22□□□□□ -0.61
LRTOMT-210ENST00000447974 TRIM26Q12899 539 aaPredicted RBP11.21□□□□□ -0.61
LRTOMT-210ENST00000447974 ABCC8Q09428 1581 aa11.21□□□□□ -0.62
LRTOMT-210ENST00000447974 ANP32EQ9BTT0 268 aa11.21□□□□□ -0.62
LRTOMT-210ENST00000447974 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
LRTOMT-210ENST00000447974 DNMBPQ6XZF7 1577 aa11.17□□□□□ -0.62
LRTOMT-210ENST00000447974 WRNQ14191 1432 aaPredicted RBP eCLIP11.16□□□□□ -0.62
LRTOMT-210ENST00000447974 CUX1P39880 1505 aa11.16□□□□□ -0.62
LRTOMT-210ENST00000447974 CHIC1Q5VXU3 224 aa11.16□□□□□ -0.62
LRTOMT-210ENST00000447974 POLA1P09884 1462 aaPredicted RBP11.12□□□□□ -0.63
LRTOMT-210ENST00000447974 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
LRTOMT-210ENST00000447974 SYNJ1O43426 1573 aa11.12□□□□□ -0.63
LRTOMT-210ENST00000447974 RAD54L2Q9Y4B4 1467 aa11.1□□□□□ -0.63
LRTOMT-210ENST00000447974 SOGA1O94964 1423 aa11.09□□□□□ -0.63
LRTOMT-210ENST00000447974 TOP2BQ02880 1626 aa11.08□□□□□ -0.64
LRTOMT-210ENST00000447974 IFT140Q96RY7 1462 aa11.08□□□□□ -0.64
LRTOMT-210ENST00000447974 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
LRTOMT-210ENST00000447974 ZNF608Q9ULD9 1512 aaPredicted RBP11.06□□□□□ -0.64
LRTOMT-210ENST00000447974 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
LRTOMT-210ENST00000447974 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
LRTOMT-210ENST00000447974 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
LRTOMT-210ENST00000447974 TARBP1Q13395 1621 aaKnown RBP11.03□□□□□ -0.64
LRTOMT-210ENST00000447974 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.64
LRTOMT-210ENST00000447974 EIF4G3O43432 1585 aaKnown RBP11□□□□□ -0.65
LRTOMT-210ENST00000447974 ABCA10Q8WWZ4 1543 aa10.98□□□□□ -0.65
LRTOMT-210ENST00000447974 WDR97A6NE52 1622 aa10.96□□□□□ -0.66
LRTOMT-210ENST00000447974 GAPVD1Q14C86 1478 aa10.96□□□□□ -0.66
LRTOMT-210ENST00000447974 FBLN2P98095 1184 aa10.96□□□□□ -0.66
LRTOMT-210ENST00000447974 DIEXFQ68CQ4 756 aaKnown RBP10.94□□□□□ -0.66
LRTOMT-210ENST00000447974 GRIN2BQ13224 1484 aa10.92□□□□□ -0.66
LRTOMT-210ENST00000447974 SNAPC4Q5SXM2 1469 aa10.92□□□□□ -0.66
LRTOMT-210ENST00000447974 ABCA5Q8WWZ7 1642 aa10.92□□□□□ -0.66
LRTOMT-210ENST00000447974 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
LRTOMT-210ENST00000447974 PBRM1Q86U86 1689 aa10.9□□□□□ -0.66
LRTOMT-210ENST00000447974 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms