RNA–Protein interactions for RNA: ENST00000447630.5

SS18L2-202, Transcript of SS18 like 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SS18L2, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-202ENST00000447630 NISCHQ9Y2I1 1504 aa39.67■■■■□ 3.94
SS18L2-202ENST00000447630 CCDC180Q9P1Z9 1646 aa35.24■■■■□ 3.23
SS18L2-202ENST00000447630 ABCC9O60706 1549 aa34.37■■■■□ 3.09
SS18L2-202ENST00000447630 AEBP2Q6ZN18 517 aaPredicted RBP33.9■■■■□ 3.02
SS18L2-202ENST00000447630 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
SS18L2-202ENST00000447630 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
SS18L2-202ENST00000447630 NACADO15069 1562 aa33.11■■■□□ 2.89
SS18L2-202ENST00000447630 CHIC1Q5VXU3 224 aa33.07■■■□□ 2.88
SS18L2-202ENST00000447630 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
SS18L2-202ENST00000447630 MYO15BQ96JP2 1530 aa32.93■■■□□ 2.86
SS18L2-202ENST00000447630 DCAF1Q9Y4B6 1507 aa32.83■■■□□ 2.85
SS18L2-202ENST00000447630 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
SS18L2-202ENST00000447630 SCRIBQ14160 1630 aa32.15■■■□□ 2.74
SS18L2-202ENST00000447630 PABPN1Q86U42 306 aaKnown RBP eCLIP32.15■■■□□ 2.74
SS18L2-202ENST00000447630 BICRAQ9NZM4 1560 aa32.09■■■□□ 2.73
SS18L2-202ENST00000447630 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
SS18L2-202ENST00000447630 DNAJC5BQ9UF47 199 aa31.44■■■□□ 2.62
SS18L2-202ENST00000447630 EIF4G1Q04637 1599 aaKnown RBP31.25■■■□□ 2.59
SS18L2-202ENST00000447630 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
SS18L2-202ENST00000447630 CECR2Q9BXF3 1484 aa30.88■■■□□ 2.53
SS18L2-202ENST00000447630 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
SS18L2-202ENST00000447630 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
SS18L2-202ENST00000447630 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
SS18L2-202ENST00000447630 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
SS18L2-202ENST00000447630 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
SS18L2-202ENST00000447630 NCAPD3P42695 1498 aa30.54■■■□□ 2.48
SS18L2-202ENST00000447630 PEG3Q9GZU2 1588 aa30.45■■■□□ 2.47
SS18L2-202ENST00000447630 HMGXB3Q12766 1538 aa30.4■■■□□ 2.46
SS18L2-202ENST00000447630 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
SS18L2-202ENST00000447630 RSF1Q96T23 1441 aaPredicted RBP30.26■■■□□ 2.43
SS18L2-202ENST00000447630 WIZO95785 1651 aa30.26■■■□□ 2.43
SS18L2-202ENST00000447630 TOP2AP11388 1531 aaKnown RBP29.94■■■□□ 2.38
SS18L2-202ENST00000447630 NESP48681 1621 aa29.76■■■□□ 2.35
SS18L2-202ENST00000447630 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
SS18L2-202ENST00000447630 CADPSQ9ULU8 1353 aa29.66■■■□□ 2.34
SS18L2-202ENST00000447630 ERCC6Q03468 1493 aa29.64■■■□□ 2.34
SS18L2-202ENST00000447630 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
SS18L2-202ENST00000447630 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
SS18L2-202ENST00000447630 PDS5BQ9NTI5 1447 aa29.54■■■□□ 2.32
SS18L2-202ENST00000447630 CFTRP13569 1480 aa29.5■■■□□ 2.31
SS18L2-202ENST00000447630 KIF21AQ7Z4S6 1674 aa29.44■■■□□ 2.3
SS18L2-202ENST00000447630 PRDM2Q13029 1718 aa29.33■■■□□ 2.29
SS18L2-202ENST00000447630 FANCD2Q9BXW9 1451 aa29.32■■■□□ 2.28
SS18L2-202ENST00000447630 THOC2Q8NI27 1593 aaKnown RBP29.29■■■□□ 2.28
SS18L2-202ENST00000447630 CUX2O14529 1486 aa29.28■■■□□ 2.28
SS18L2-202ENST00000447630 CEP164Q9UPV0 1460 aa29.28■■■□□ 2.28
SS18L2-202ENST00000447630 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
SS18L2-202ENST00000447630 WDR62O43379 1518 aa29.1■■■□□ 2.25
SS18L2-202ENST00000447630 PHF23Q9BUL5 403 aaPredicted RBP29.04■■■□□ 2.24
SS18L2-202ENST00000447630 URB2Q14146 1524 aaKnown RBP29■■■□□ 2.23
SS18L2-202ENST00000447630 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
SS18L2-202ENST00000447630 TOPBP1Q92547 1522 aa28.86■■■□□ 2.21
SS18L2-202ENST00000447630 SENP3Q9H4L4 574 aaPredicted RBP28.86■■■□□ 2.21
SS18L2-202ENST00000447630 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
SS18L2-202ENST00000447630 CUX1P39880 1505 aa28.67■■■□□ 2.18
SS18L2-202ENST00000447630 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
SS18L2-202ENST00000447630 POLA1P09884 1462 aaPredicted RBP28.61■■■□□ 2.17
SS18L2-202ENST00000447630 FGD5Q6ZNL6 1462 aa28.56■■■□□ 2.16
SS18L2-202ENST00000447630 WRNQ14191 1432 aaPredicted RBP eCLIP28.54■■■□□ 2.16
SS18L2-202ENST00000447630 TARBP1Q13395 1621 aaKnown RBP28.54■■■□□ 2.16
SS18L2-202ENST00000447630 SOGA1O94964 1423 aa28.52■■■□□ 2.16
SS18L2-202ENST00000447630 ZNF608Q9ULD9 1512 aaPredicted RBP28.5■■■□□ 2.15
SS18L2-202ENST00000447630 RAD54L2Q9Y4B4 1467 aa28.49■■■□□ 2.15
SS18L2-202ENST00000447630 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
SS18L2-202ENST00000447630 BIVM-ERCC5R4GMW8 1640 aa28.47■■■□□ 2.15
SS18L2-202ENST00000447630 SYNJ1O43426 1573 aa28.45■■■□□ 2.14
SS18L2-202ENST00000447630 EIF4G3O43432 1585 aaKnown RBP28.4■■■□□ 2.14
SS18L2-202ENST00000447630 AQRO60306 1485 aaKnown RBP eCLIP28.38■■■□□ 2.13
SS18L2-202ENST00000447630 TDRD9Q8NDG6 1382 aaKnown RBP28.35■■■□□ 2.13
SS18L2-202ENST00000447630 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
SS18L2-202ENST00000447630 ABCA10Q8WWZ4 1543 aa28.3■■■□□ 2.12
SS18L2-202ENST00000447630 DNAJC5Q9H3Z4 198 aa28.27■■■□□ 2.12
SS18L2-202ENST00000447630 GAPVD1Q14C86 1478 aa28.2■■■□□ 2.1
SS18L2-202ENST00000447630 GRIN2BQ13224 1484 aa28.18■■■□□ 2.1
SS18L2-202ENST00000447630 ABCA5Q8WWZ7 1642 aa28.17■■■□□ 2.1
SS18L2-202ENST00000447630 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
SS18L2-202ENST00000447630 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
SS18L2-202ENST00000447630 SNAPC4Q5SXM2 1469 aa28.1■■■□□ 2.09
SS18L2-202ENST00000447630 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
SS18L2-202ENST00000447630 FBLN2P98095 1184 aa28.06■■■□□ 2.08
SS18L2-202ENST00000447630 CHD1O14646 1710 aa28.06■■■□□ 2.08
SS18L2-202ENST00000447630 CHMP7Q8WUX9 453 aaPredicted RBP28■■■□□ 2.07
SS18L2-202ENST00000447630 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
SS18L2-202ENST00000447630 SYNJ2O15056 1496 aa27.97■■■□□ 2.07
SS18L2-202ENST00000447630 ERICH3Q5RHP9 1530 aa27.97■■■□□ 2.07
SS18L2-202ENST00000447630 KIF27Q86VH2 1401 aa27.96■■■□□ 2.07
SS18L2-202ENST00000447630 ADAMTS12P58397 1594 aa27.89■■■□□ 2.05
SS18L2-202ENST00000447630 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
SS18L2-202ENST00000447630 IGF1RP08069 1367 aa27.82■■■□□ 2.04
SS18L2-202ENST00000447630 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
SS18L2-202ENST00000447630 CUL7Q14999 1698 aa27.75■■■□□ 2.03
SS18L2-202ENST00000447630 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
SS18L2-202ENST00000447630 RUSC2Q8N2Y8 1516 aa27.7■■■□□ 2.02
SS18L2-202ENST00000447630 CARMIL1Q5VZK9 1371 aa27.67■■■□□ 2.02
SS18L2-202ENST00000447630 NUP160Q12769 1436 aa27.67■■■□□ 2.02
SS18L2-202ENST00000447630 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
SS18L2-202ENST00000447630 RIMBP3CA6NJZ7 1639 aa27.62■■■□□ 2.01
SS18L2-202ENST00000447630 RIMBP3BA6NNM3 1639 aa27.62■■■□□ 2.01
SS18L2-202ENST00000447630 RIMBP3Q9UFD9 1639 aa27.62■■■□□ 2.01
SS18L2-202ENST00000447630 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms