RNA–Protein interactions for RNA: ENST00000447298.1

H19-213, H19, imprinted maternally expressed transcript, humanhuman

TSL 2

Gene H19, Length 524 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-213ENST00000447298 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
H19-213ENST00000447298 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
H19-213ENST00000447298 ABCC9O60706 1549 aa28.63■■■□□ 2.17
H19-213ENST00000447298 ZCCHC6Q5VYS8 1495 aaKnown RBP27.61■■■□□ 2.01
H19-213ENST00000447298 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
H19-213ENST00000447298 MYO15BQ96JP2 1530 aa27.4■■□□□ 1.98
H19-213ENST00000447298 NACADO15069 1562 aa27.39■■□□□ 1.97
H19-213ENST00000447298 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
H19-213ENST00000447298 RB1CC1Q8TDY2 1594 aa27.3■■□□□ 1.96
H19-213ENST00000447298 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
H19-213ENST00000447298 UNC13AQ9UPW8 1703 aa26.7■■□□□ 1.87
H19-213ENST00000447298 SCRIBQ14160 1630 aa26.62■■□□□ 1.85
H19-213ENST00000447298 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
H19-213ENST00000447298 BICRAQ9NZM4 1560 aa26.51■■□□□ 1.83
H19-213ENST00000447298 SHROOM4Q9ULL8 1493 aa26.27■■□□□ 1.8
H19-213ENST00000447298 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
H19-213ENST00000447298 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
H19-213ENST00000447298 EIF4G1Q04637 1599 aaKnown RBP25.74■■□□□ 1.71
H19-213ENST00000447298 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
H19-213ENST00000447298 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
H19-213ENST00000447298 MROH2BQ7Z745 1585 aa25.47■■□□□ 1.67
H19-213ENST00000447298 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
H19-213ENST00000447298 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
H19-213ENST00000447298 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
H19-213ENST00000447298 RSF1Q96T23 1441 aaPredicted RBP25.32■■□□□ 1.64
H19-213ENST00000447298 SMARCA2P51531 1590 aa25.3■■□□□ 1.64
H19-213ENST00000447298 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
H19-213ENST00000447298 WIZO95785 1651 aa25.19■■□□□ 1.62
H19-213ENST00000447298 HMGXB3Q12766 1538 aa25.17■■□□□ 1.62
H19-213ENST00000447298 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
H19-213ENST00000447298 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
H19-213ENST00000447298 CUX2O14529 1486 aa24.89■■□□□ 1.57
H19-213ENST00000447298 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
H19-213ENST00000447298 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
H19-213ENST00000447298 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
H19-213ENST00000447298 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
H19-213ENST00000447298 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
H19-213ENST00000447298 NESP48681 1621 aa24.51■■□□□ 1.51
H19-213ENST00000447298 CFTRP13569 1480 aa24.49■■□□□ 1.51
H19-213ENST00000447298 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
H19-213ENST00000447298 PRDM2Q13029 1718 aa24.31■■□□□ 1.48
H19-213ENST00000447298 THOC2Q8NI27 1593 aaKnown RBP24.26■■□□□ 1.47
H19-213ENST00000447298 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
H19-213ENST00000447298 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
H19-213ENST00000447298 CEP164Q9UPV0 1460 aa24.15■■□□□ 1.46
H19-213ENST00000447298 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
H19-213ENST00000447298 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
H19-213ENST00000447298 WDR62O43379 1518 aa24■■□□□ 1.43
H19-213ENST00000447298 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
H19-213ENST00000447298 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
H19-213ENST00000447298 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
H19-213ENST00000447298 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
H19-213ENST00000447298 CUX1P39880 1505 aa23.86■■□□□ 1.41
H19-213ENST00000447298 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
H19-213ENST00000447298 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
H19-213ENST00000447298 SYNJ1O43426 1573 aa23.76■■□□□ 1.39
H19-213ENST00000447298 TOP2BQ02880 1626 aa23.76■■□□□ 1.39
H19-213ENST00000447298 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
H19-213ENST00000447298 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
H19-213ENST00000447298 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
H19-213ENST00000447298 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
H19-213ENST00000447298 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.38
H19-213ENST00000447298 SOGA1O94964 1423 aa23.62■■□□□ 1.37
H19-213ENST00000447298 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
H19-213ENST00000447298 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
H19-213ENST00000447298 ABCA10Q8WWZ4 1543 aa23.52■■□□□ 1.36
H19-213ENST00000447298 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
H19-213ENST00000447298 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
H19-213ENST00000447298 EIF4G3O43432 1585 aaKnown RBP23.43■■□□□ 1.34
H19-213ENST00000447298 TDRD9Q8NDG6 1382 aaKnown RBP23.42■■□□□ 1.34
H19-213ENST00000447298 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.34
H19-213ENST00000447298 ABCA5Q8WWZ7 1642 aa23.4■■□□□ 1.34
H19-213ENST00000447298 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
H19-213ENST00000447298 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
H19-213ENST00000447298 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
H19-213ENST00000447298 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
H19-213ENST00000447298 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
H19-213ENST00000447298 KIF27Q86VH2 1401 aa23.3■■□□□ 1.32
H19-213ENST00000447298 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
H19-213ENST00000447298 ARHGEF11O15085 1522 aa23.27■■□□□ 1.32
H19-213ENST00000447298 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
H19-213ENST00000447298 RUSC2Q8N2Y8 1516 aa23.22■■□□□ 1.31
H19-213ENST00000447298 MAGI1Q96QZ7 1491 aaPredicted RBP23.21■■□□□ 1.31
H19-213ENST00000447298 SNAPC4Q5SXM2 1469 aa23.2■■□□□ 1.3
H19-213ENST00000447298 IGF1RP08069 1367 aa23.19■■□□□ 1.3
H19-213ENST00000447298 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
H19-213ENST00000447298 ADAMTS12P58397 1594 aa23.13■■□□□ 1.29
H19-213ENST00000447298 TRHP20396 242 aaPredicted RBP23.12■■□□□ 1.29
H19-213ENST00000447298 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
H19-213ENST00000447298 EEA1Q15075 1411 aa23.11■■□□□ 1.29
H19-213ENST00000447298 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
H19-213ENST00000447298 CUL7Q14999 1698 aa23.09■■□□□ 1.29
H19-213ENST00000447298 CHD1O14646 1710 aa23.06■■□□□ 1.28
H19-213ENST00000447298 FBLN2P98095 1184 aa23.06■■□□□ 1.28
H19-213ENST00000447298 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
H19-213ENST00000447298 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
H19-213ENST00000447298 CSRNP3Q8WYN3 585 aa23.02■■□□□ 1.28
H19-213ENST00000447298 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
H19-213ENST00000447298 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
H19-213ENST00000447298 PRXQ9BXM0 1461 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms