RNA–Protein interactions for RNA: ENST00000447223.5

ACAA1-208, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 3

Gene ACAA1, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-208ENST00000447223 NISCHQ9Y2I1 1504 aa41.22■■■■■ 4.19
ACAA1-208ENST00000447223 ABCC9O60706 1549 aa38.12■■■■□ 3.69
ACAA1-208ENST00000447223 CCDC180Q9P1Z9 1646 aa37.18■■■■□ 3.54
ACAA1-208ENST00000447223 DNAJC5BQ9UF47 199 aa36.46■■■■□ 3.43
ACAA1-208ENST00000447223 RB1CC1Q8TDY2 1594 aa35.88■■■■□ 3.33
ACAA1-208ENST00000447223 PABPN1Q86U42 306 aaKnown RBP eCLIP35.47■■■■□ 3.27
ACAA1-208ENST00000447223 NACADO15069 1562 aa35.44■■■■□ 3.26
ACAA1-208ENST00000447223 DCAF8L2P0C7V8 631 aa35.41■■■■□ 3.26
ACAA1-208ENST00000447223 UNC13AQ9UPW8 1703 aa34.85■■■■□ 3.17
ACAA1-208ENST00000447223 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
ACAA1-208ENST00000447223 MYO15BQ96JP2 1530 aa34.66■■■■□ 3.14
ACAA1-208ENST00000447223 CECR2Q9BXF3 1484 aa34.42■■■■□ 3.1
ACAA1-208ENST00000447223 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
ACAA1-208ENST00000447223 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
ACAA1-208ENST00000447223 DNAJC5Q9H3Z4 198 aa34.06■■■■□ 3.04
ACAA1-208ENST00000447223 EIF4G1Q04637 1599 aaKnown RBP34.04■■■■□ 3.04
ACAA1-208ENST00000447223 ZCCHC6Q5VYS8 1495 aaKnown RBP33.96■■■■□ 3.03
ACAA1-208ENST00000447223 SCRIBQ14160 1630 aa33.95■■■■□ 3.03
ACAA1-208ENST00000447223 DCAF1Q9Y4B6 1507 aa33.94■■■■□ 3.02
ACAA1-208ENST00000447223 CUX2O14529 1486 aa33.12■■■□□ 2.89
ACAA1-208ENST00000447223 ERCC6Q03468 1493 aa33.02■■■□□ 2.88
ACAA1-208ENST00000447223 NCAPD3P42695 1498 aa32.77■■■□□ 2.84
ACAA1-208ENST00000447223 ATAD2BQ9ULI0 1458 aa32.56■■■□□ 2.8
ACAA1-208ENST00000447223 NESP48681 1621 aa32.5■■■□□ 2.79
ACAA1-208ENST00000447223 SMARCA2P51531 1590 aa32.41■■■□□ 2.78
ACAA1-208ENST00000447223 HMGXB3Q12766 1538 aa32.39■■■□□ 2.78
ACAA1-208ENST00000447223 TRIM41Q8WV44 630 aa32.35■■■□□ 2.77
ACAA1-208ENST00000447223 SMARCA4P51532 1647 aa32.26■■■□□ 2.76
ACAA1-208ENST00000447223 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
ACAA1-208ENST00000447223 THOC2Q8NI27 1593 aaKnown RBP32.2■■■□□ 2.75
ACAA1-208ENST00000447223 LAMC3Q9Y6N6 1575 aa32.1■■■□□ 2.73
ACAA1-208ENST00000447223 PDS5BQ9NTI5 1447 aa32.06■■■□□ 2.72
ACAA1-208ENST00000447223 BAZ1AQ9NRL2 1556 aaPredicted RBP32.04■■■□□ 2.72
ACAA1-208ENST00000447223 PEG3Q9GZU2 1588 aa31.92■■■□□ 2.7
ACAA1-208ENST00000447223 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
ACAA1-208ENST00000447223 CADPSQ9ULU8 1353 aa31.8■■■□□ 2.68
ACAA1-208ENST00000447223 MRC2Q9UBG0 1479 aa31.77■■■□□ 2.68
ACAA1-208ENST00000447223 MROH2BQ7Z745 1585 aa31.76■■■□□ 2.67
ACAA1-208ENST00000447223 WDR62O43379 1518 aa31.65■■■□□ 2.66
ACAA1-208ENST00000447223 OSCARQ8IYS5 282 aa31.64■■■□□ 2.66
ACAA1-208ENST00000447223 CEP164Q9UPV0 1460 aa31.5■■■□□ 2.63
ACAA1-208ENST00000447223 FANCD2Q9BXW9 1451 aa31.41■■■□□ 2.62
ACAA1-208ENST00000447223 WIZO95785 1651 aa31.29■■■□□ 2.6
ACAA1-208ENST00000447223 CFTRP13569 1480 aa31.21■■■□□ 2.59
ACAA1-208ENST00000447223 URB2Q14146 1524 aaKnown RBP31.15■■■□□ 2.58
ACAA1-208ENST00000447223 RIMBP3CA6NJZ7 1639 aa31.1■■■□□ 2.57
ACAA1-208ENST00000447223 RIMBP3BA6NNM3 1639 aa31.1■■■□□ 2.57
ACAA1-208ENST00000447223 RIMBP3Q9UFD9 1639 aa31.1■■■□□ 2.57
ACAA1-208ENST00000447223 ARHGEF11O15085 1522 aa30.98■■■□□ 2.55
ACAA1-208ENST00000447223 CYB5RLQ6IPT4 315 aa30.97■■■□□ 2.55
ACAA1-208ENST00000447223 TRHP20396 242 aaPredicted RBP30.92■■■□□ 2.54
ACAA1-208ENST00000447223 ZNF608Q9ULD9 1512 aaPredicted RBP30.92■■■□□ 2.54
ACAA1-208ENST00000447223 IFT140Q96RY7 1462 aa30.91■■■□□ 2.54
ACAA1-208ENST00000447223 RSF1Q96T23 1441 aaPredicted RBP30.87■■■□□ 2.53
ACAA1-208ENST00000447223 TOP2AP11388 1531 aaKnown RBP30.87■■■□□ 2.53
ACAA1-208ENST00000447223 TOPBP1Q92547 1522 aa30.7■■■□□ 2.51
ACAA1-208ENST00000447223 FBLN2P98095 1184 aa30.69■■■□□ 2.5
ACAA1-208ENST00000447223 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
ACAA1-208ENST00000447223 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
ACAA1-208ENST00000447223 ABCC8Q09428 1581 aa30.61■■■□□ 2.49
ACAA1-208ENST00000447223 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
ACAA1-208ENST00000447223 AEBP2Q6ZN18 517 aaPredicted RBP30.6■■■□□ 2.49
ACAA1-208ENST00000447223 CCDC88BA6NC98 1476 aa30.59■■■□□ 2.49
ACAA1-208ENST00000447223 AQRO60306 1485 aaKnown RBP eCLIP30.59■■■□□ 2.497e-7■■■■■ 30.6
ACAA1-208ENST00000447223 CHD1O14646 1710 aa30.49■■■□□ 2.47
ACAA1-208ENST00000447223 DNMBPQ6XZF7 1577 aa30.48■■■□□ 2.47
ACAA1-208ENST00000447223 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
ACAA1-208ENST00000447223 POLA1P09884 1462 aaPredicted RBP30.33■■■□□ 2.45
ACAA1-208ENST00000447223 TDRD9Q8NDG6 1382 aaKnown RBP30.32■■■□□ 2.44
ACAA1-208ENST00000447223 CHMP7Q8WUX9 453 aaPredicted RBP30.31■■■□□ 2.44
ACAA1-208ENST00000447223 RAD54L2Q9Y4B4 1467 aa30.28■■■□□ 2.44
ACAA1-208ENST00000447223 SOGA1O94964 1423 aa30.27■■■□□ 2.44
ACAA1-208ENST00000447223 SNAPC4Q5SXM2 1469 aa30.22■■■□□ 2.43
ACAA1-208ENST00000447223 CLASP1Q7Z460 1538 aa30.17■■■□□ 2.42
ACAA1-208ENST00000447223 SYNJ1O43426 1573 aa30.15■■■□□ 2.42
ACAA1-208ENST00000447223 MAGI1Q96QZ7 1491 aaPredicted RBP30.09■■■□□ 2.41
ACAA1-208ENST00000447223 GRIN2BQ13224 1484 aa30.05■■■□□ 2.4
ACAA1-208ENST00000447223 FGD5Q6ZNL6 1462 aa30.05■■■□□ 2.4
ACAA1-208ENST00000447223 WDR97A6NE52 1622 aa30.03■■■□□ 2.4
ACAA1-208ENST00000447223 SYNJ2O15056 1496 aa30.02■■■□□ 2.4
ACAA1-208ENST00000447223 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
ACAA1-208ENST00000447223 CUX1P39880 1505 aa29.87■■■□□ 2.37
ACAA1-208ENST00000447223 PBRM1Q86U86 1689 aa29.71■■■□□ 2.35
ACAA1-208ENST00000447223 ERCC6L2Q5T890 1561 aa29.68■■■□□ 2.34
ACAA1-208ENST00000447223 ABCA10Q8WWZ4 1543 aa29.65■■■□□ 2.34
ACAA1-208ENST00000447223 GRIN2AQ12879 1464 aa29.63■■■□□ 2.33
ACAA1-208ENST00000447223 ABCA5Q8WWZ7 1642 aa29.59■■■□□ 2.33
ACAA1-208ENST00000447223 CEP170Q5SW79 1584 aa29.58■■■□□ 2.33
ACAA1-208ENST00000447223 NUP160Q12769 1436 aa29.55■■■□□ 2.32
ACAA1-208ENST00000447223 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
ACAA1-208ENST00000447223 FAM69CQ0P6D2 419 aa29.46■■■□□ 2.31
ACAA1-208ENST00000447223 ADAMTS12P58397 1594 aa29.45■■■□□ 2.31
ACAA1-208ENST00000447223 FHAD1B1AJZ9 1412 aa29.45■■■□□ 2.3
ACAA1-208ENST00000447223 NPM1P06748 294 aaKnown RBP eCLIP29.43■■■□□ 2.3
ACAA1-208ENST00000447223 PRG4Q92954 1404 aaPredicted RBP29.41■■■□□ 2.3
ACAA1-208ENST00000447223 SHROOM2Q13796 1616 aa29.4■■■□□ 2.3
ACAA1-208ENST00000447223 JPH4Q96JJ6 628 aa29.39■■■□□ 2.3
ACAA1-208ENST00000447223 KIF13AQ9H1H9 1805 aa29.38■■■□□ 2.29
ACAA1-208ENST00000447223 ABCC10Q5T3U5 1492 aa29.31■■■□□ 2.28
ACAA1-208ENST00000447223 KDM4FA0A1W2PPD8 638 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms