RNA–Protein interactions for RNA: ENST00000447205.1

TUBA4A-206, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-206ENST00000447205 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
TUBA4A-206ENST00000447205 CCDC180Q9P1Z9 1646 aa34.36■■■■□ 3.09
TUBA4A-206ENST00000447205 ABCC9O60706 1549 aa33.53■■■□□ 2.96
TUBA4A-206ENST00000447205 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.76
TUBA4A-206ENST00000447205 NACADO15069 1562 aa32.29■■■□□ 2.76
TUBA4A-206ENST00000447205 ZCCHC6Q5VYS8 1495 aaKnown RBP32.14■■■□□ 2.74
TUBA4A-206ENST00000447205 MYO15BQ96JP2 1530 aa32.14■■■□□ 2.74
TUBA4A-206ENST00000447205 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
TUBA4A-206ENST00000447205 DCAF1Q9Y4B6 1507 aa31.97■■■□□ 2.71
TUBA4A-206ENST00000447205 UNC13AQ9UPW8 1703 aa31.63■■■□□ 2.65
TUBA4A-206ENST00000447205 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
TUBA4A-206ENST00000447205 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
TUBA4A-206ENST00000447205 SCRIBQ14160 1630 aa31.26■■■□□ 2.59
TUBA4A-206ENST00000447205 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
TUBA4A-206ENST00000447205 DNAJC5BQ9UF47 199 aa30.82■■■□□ 2.52
TUBA4A-206ENST00000447205 EIF4G1Q04637 1599 aaKnown RBP30.51■■■□□ 2.47
TUBA4A-206ENST00000447205 CC2D2AQ9P2K1 1620 aa30.39■■■□□ 2.46
TUBA4A-206ENST00000447205 CECR2Q9BXF3 1484 aa30.17■■■□□ 2.42
TUBA4A-206ENST00000447205 SMARCA4P51532 1647 aa29.94■■■□□ 2.38
TUBA4A-206ENST00000447205 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
TUBA4A-206ENST00000447205 NCAPD3P42695 1498 aa29.78■■■□□ 2.36
TUBA4A-206ENST00000447205 ATAD2BQ9ULI0 1458 aa29.78■■■□□ 2.36
TUBA4A-206ENST00000447205 SMARCA2P51531 1590 aa29.75■■■□□ 2.35
TUBA4A-206ENST00000447205 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
TUBA4A-206ENST00000447205 PEG3Q9GZU2 1588 aa29.7■■■□□ 2.35
TUBA4A-206ENST00000447205 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
TUBA4A-206ENST00000447205 BAZ1BQ9UIG0 1483 aaKnown RBP29.5■■■□□ 2.31
TUBA4A-206ENST00000447205 WIZO95785 1651 aa29.38■■■□□ 2.29
TUBA4A-206ENST00000447205 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
TUBA4A-206ENST00000447205 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
TUBA4A-206ENST00000447205 NESP48681 1621 aa29.02■■■□□ 2.24
TUBA4A-206ENST00000447205 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
TUBA4A-206ENST00000447205 ERCC6Q03468 1493 aa28.91■■■□□ 2.22
TUBA4A-206ENST00000447205 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
TUBA4A-206ENST00000447205 PDS5BQ9NTI5 1447 aa28.78■■■□□ 2.2
TUBA4A-206ENST00000447205 CFTRP13569 1480 aa28.73■■■□□ 2.19
TUBA4A-206ENST00000447205 KIF21AQ7Z4S6 1674 aa28.73■■■□□ 2.19
TUBA4A-206ENST00000447205 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
TUBA4A-206ENST00000447205 CUX2O14529 1486 aa28.7■■■□□ 2.18
TUBA4A-206ENST00000447205 THOC2Q8NI27 1593 aaKnown RBP28.67■■■□□ 2.18
TUBA4A-206ENST00000447205 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
TUBA4A-206ENST00000447205 FANCD2Q9BXW9 1451 aa28.54■■■□□ 2.16
TUBA4A-206ENST00000447205 CEP164Q9UPV0 1460 aa28.52■■■□□ 2.16
TUBA4A-206ENST00000447205 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
TUBA4A-206ENST00000447205 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
TUBA4A-206ENST00000447205 WDR62O43379 1518 aa28.43■■■□□ 2.14
TUBA4A-206ENST00000447205 URB2Q14146 1524 aaKnown RBP28.28■■■□□ 2.12
TUBA4A-206ENST00000447205 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
TUBA4A-206ENST00000447205 TOPBP1Q92547 1522 aa28.1■■■□□ 2.09
TUBA4A-206ENST00000447205 DNMBPQ6XZF7 1577 aa28.08■■■□□ 2.09
TUBA4A-206ENST00000447205 IFT140Q96RY7 1462 aa27.94■■■□□ 2.06
TUBA4A-206ENST00000447205 CUX1P39880 1505 aa27.87■■■□□ 2.05
TUBA4A-206ENST00000447205 POLA1P09884 1462 aaPredicted RBP27.86■■■□□ 2.05
TUBA4A-206ENST00000447205 TARBP1Q13395 1621 aaKnown RBP27.82■■■□□ 2.04
TUBA4A-206ENST00000447205 DNAJC5Q9H3Z4 198 aa27.81■■■□□ 2.04
TUBA4A-206ENST00000447205 ZNF608Q9ULD9 1512 aaPredicted RBP27.79■■■□□ 2.04
TUBA4A-206ENST00000447205 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.04
TUBA4A-206ENST00000447205 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
TUBA4A-206ENST00000447205 SOGA1O94964 1423 aa27.71■■■□□ 2.03
TUBA4A-206ENST00000447205 RAD54L2Q9Y4B4 1467 aa27.7■■■□□ 2.03
TUBA4A-206ENST00000447205 BIVM-ERCC5R4GMW8 1640 aa27.66■■■□□ 2.02
TUBA4A-206ENST00000447205 WRNQ14191 1432 aaPredicted RBP eCLIP27.66■■■□□ 2.02
TUBA4A-206ENST00000447205 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
TUBA4A-206ENST00000447205 TOP2BQ02880 1626 aa27.64■■■□□ 2.02
TUBA4A-206ENST00000447205 SYNJ1O43426 1573 aa27.61■■■□□ 2.01
TUBA4A-206ENST00000447205 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.01
TUBA4A-206ENST00000447205 ABCA10Q8WWZ4 1543 aa27.54■■■□□ 2
TUBA4A-206ENST00000447205 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
TUBA4A-206ENST00000447205 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.98
TUBA4A-206ENST00000447205 OSCARQ8IYS5 282 aa27.42■■□□□ 1.98
TUBA4A-206ENST00000447205 GRIN2BQ13224 1484 aa27.42■■□□□ 1.98
TUBA4A-206ENST00000447205 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
TUBA4A-206ENST00000447205 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
TUBA4A-206ENST00000447205 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
TUBA4A-206ENST00000447205 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
TUBA4A-206ENST00000447205 CHD1O14646 1710 aa27.37■■□□□ 1.97
TUBA4A-206ENST00000447205 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
TUBA4A-206ENST00000447205 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
TUBA4A-206ENST00000447205 FBLN2P98095 1184 aa27.2■■□□□ 1.94
TUBA4A-206ENST00000447205 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
TUBA4A-206ENST00000447205 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
TUBA4A-206ENST00000447205 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
TUBA4A-206ENST00000447205 CLASP1Q7Z460 1538 aa27.1■■□□□ 1.93
TUBA4A-206ENST00000447205 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
TUBA4A-206ENST00000447205 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
TUBA4A-206ENST00000447205 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
TUBA4A-206ENST00000447205 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
TUBA4A-206ENST00000447205 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
TUBA4A-206ENST00000447205 ARHGEF11O15085 1522 aa27.03■■□□□ 1.92
TUBA4A-206ENST00000447205 IGF1RP08069 1367 aa26.98■■□□□ 1.91
TUBA4A-206ENST00000447205 NUP160Q12769 1436 aa26.98■■□□□ 1.91
TUBA4A-206ENST00000447205 CUL7Q14999 1698 aa26.96■■□□□ 1.91
TUBA4A-206ENST00000447205 CEP170Q5SW79 1584 aa26.94■■□□□ 1.9
TUBA4A-206ENST00000447205 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
TUBA4A-206ENST00000447205 ARAP1Q96P48 1450 aa26.81■■□□□ 1.88
TUBA4A-206ENST00000447205 CARMIL1Q5VZK9 1371 aa26.81■■□□□ 1.88
TUBA4A-206ENST00000447205 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
TUBA4A-206ENST00000447205 SHROOM2Q13796 1616 aa26.8■■□□□ 1.88
TUBA4A-206ENST00000447205 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
TUBA4A-206ENST00000447205 KIAA0586Q9BVV6 1533 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms